[go: up one dir, main page]
More Web Proxy on the site http://driver.im/
KEGG   Xiphophorus maculatus (southern platyfish): 102218909
Entry
102218909         CDS       T02923                                 
Name
(RefSeq) retinoic acid receptor RXR-beta-A-like isoform X1
  KO
K08524  retinoid X receptor alpha
Organism
xma  Xiphophorus maculatus (southern platyfish)
Pathway
xma03320  PPAR signaling pathway
xma04148  Efferocytosis
xma04920  Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:xma00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    102218909
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:xma03000]
    102218909
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:xma03310]
    102218909
Transcription factors [BR:xma03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    102218909
Nuclear receptors [BR:xma03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   102218909
SSDB
Motif
Pfam: Hormone_recep zf-C4 Nuc_recep-AF1
Other DBs
NCBI-GeneID: 102218909
NCBI-ProteinID: XP_005812689
Ensembl: ENSXMAG00000015121
UniProt: A0A3B5Q8K2
Position
3:14678447..14689345
AA seq 444 aa
MSAPQPNSSASNSPTNFIGSPFSVISPSLGSPVASPSLGFGPISSSQISSSAPISGMHSV
SSSEDIKPPFGLRPMQAHSPGIMMSQKRLCVICGDRSSGKHYGVYSCEGCKGFFKRTVRK
DLSYTCRDNKECLVDKRQRNRCQYCRYQKCLAMGMKREAVNPIKWKNKDGKDEGWMTVQE
ERQRNREREGELEFSSGVNDEMPVEKILEAEMAVDMRVDLHSDRGSAGNSPHDAVSNICQ
TADKQLFALVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIPLKDGALLASEL
QRDSAHMAGVGAIFDRESVQSAEVGAIFDRVLTELVNKMRDMQMDKTELGCLRAIVLFNP
DAKGLSSTSEVELLREKVYASLEAYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFF
FKLIGDTPIDTFLMEMLEAPHQLS
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgtccgcacctcaacctaacagctcagcctccaacagcccaaccaacttcataggttct
cctttttcagtgataagtccttctctcggctctccggtggcatctccctctctgggattt
ggacccatcagcagcagtcagatttcgtcttcagcaccaatatcagggatgcattcagtc
agcagttcagaagatattaagcctccatttggcctgaggcccatgcaagctcacagccca
ggaataatgatgtctcagaaacgactgtgtgtgatctgtggtgaccgctcttctggcaaa
cactacggtgtgtacagctgtgaggggtgcaaaggtttctttaaacgaactgtgcgcaaa
gacctgagctacacctgcagggataacaaggagtgcctggtggacaaacgccagcgcaac
cgctgccagtactgccgctaccagaagtgcctggccatgggtatgaagagagaagcggta
aatcctataaagtggaaaaacaaggatggaaaagatgagggatggatgacggttcaggag
gagcgtcagaggaacagagagcgcgagggagagctggagttcagctccggagtgaatgat
gagatgcctgtggagaagatcttagaggcggagatggcggtggatatgcgggtggacctt
cactcagacagagggtctgcaggaaactctccccatgatgctgtttccaacatctgccag
actgctgacaagcagctgtttgctttggtggagtgggcaaagagaatccctcatttctcc
gagcttccccttgatgatcaggtcatcctcctgcgtgcagggtggaatgagctcctgatt
gcctcgttctcccatcgctccattcctctgaaggatggcgctctgctggcgtccgagctg
cagcgtgacagcgcacacatggccggagttggtgctatttttgatagggagagtgtgcag
agtgcagaagttggtgccatatttgacagggttcttactgagcttgttaacaaaatgaga
gatatgcaaatggacaaaacagagctgggctgtctccgggcaattgtcctgtttaatcca
gatgctaaagggctctccagcacaagtgaggtggagctccttagagaaaaagtctatgca
tcactggaagcttactgcaagcagaagtatccagagcagcagggaaggtttgctaagctc
ctccttcgacttccagccctgagatccattggcttgaagtgcttggagcatctttttttc
ttcaaactgatcggggacacgcctattgacaccttcctcatggaaatgcttgaagctccc
catcagttgtcttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (30)   

Download RDF
DBGET integrated database retrieval system