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KEGG   Xenopus laevis (African clawed frog): 379445
Entry
379445            CDS       T01010                                 
Symbol
tpm2.S, AMCD1, beta-TMad, beta-TMemb, DA1, DA2B, nem4, TMSB, tpm2, tpm2-a, tpm2-b, tpm2b
Name
(RefSeq) tropomyosin 2 b isoform 1
  KO
K10374  tropomyosin 2
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla04260  Cardiac muscle contraction
xla04261  Adrenergic signaling in cardiomyocytes
xla04814  Motor proteins
xla04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:xla00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    379445 (tpm2.S)
   04820 Cytoskeleton in muscle cells
    379445 (tpm2.S)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:xla04812]
    379445 (tpm2.S)
Cytoskeleton proteins [BR:xla04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Tropomyosins
     379445 (tpm2.S)
SSDB
Motif
Pfam: Tropomyosin Laminin_II CLZ CENP-F_leu_zip ATG16 DUF16 ERM_helical TMF_DNA_bd MscS_porin DUF745 DUF1664 XhlA PUMA_CC Lebercilin Laminin_I Exonuc_VII_L DUF3450 Crescentin OVT1 Golgin_A5 CCDC22_CC Fib_alpha SlyX DUF7518 DUF7310 AAA_13 Fez1 Spectrin BLOC1_2 DUF4200
Other DBs
NCBI-GeneID: 379445
NCBI-ProteinID: NP_001079755
Xenbase: XB-GENE-6255811
UniProt: Q7SZ31 A0A8J0PPC9
Position
1S:202242574..202255424
AA seq 284 aa
MDAIKKKMQMLKLDKENAIDRAEQAEADKKQAEDRWKQIEEEVLAMQKKTKGTEDEVEKY
SESVKDAQEKLEMAEKKATDAEAEVASLNRRIQLVEEELDRAQERLATALQKLEETEKAV
DESERGMKVIENRATKDGEKMVDQDQQLKEAKTIAEDSDRKYEEVARKLVGIEGDLERSE
ERAEVAESKCGDLEEELKNVTNNLKSLEAQADKYSSKEDKYEEEVNQLTEKLKEAESRVE
FAEKSVVKLEKTIDDLEDEVYSQKMRYKAISEDLDNALNDITSL
NT seq 855 nt   +upstreamnt  +downstreamnt
atggacgcgattaagaagaagatgcagatgctgaagttggacaaggagaatgcgattgat
cgcgcggaacaggccgaggcggataagaaacaggcggaggatcgctggaagcagatagag
gaggaggtgttggctatgcagaagaagaccaaggggacggaggatgaggtggagaaatat
tcggagtcagtgaaagatgctcaggagaagctggagatggcggagaagaaggcgactgac
gctgaggctgaagtagcatctttgaacaggcgcatccagctggtagaggaagagttggac
cgtgctcaggaacgtcttgccaccgctctgcagaaactggaagaaacagagaaagcagtg
gatgagagcgagagaggcatgaaggtcattgagaacagggccaccaaggatggggagaag
atggtggaccaagatcagcagctgaaagaagctaaaaccatagcagaggattcagaccgc
aagtatgaggaggtggcccgtaagcttgtcggcattgagggggacctggagcgttctgaa
gagcgagctgaggtggctgagagtaaatgtggggatctggaggaagagctgaagaacgtc
accaataacttgaaatcccttgaggcacaagcagacaagtattcatcaaaggaagacaaa
tatgaggaggaggtcaatcagctgactgagaagctaaaagaagctgagagtcgggttgag
tttgctgagaaatctgtggttaaactagagaagaccattgatgatctggaagatgaggtc
tattctcagaagatgagatataaagccatcagtgaggatttggacaatgctctcaatgac
atcacctctctttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (80)   
   KEGG ORTHOLOGY (1)   
   RefGene (75)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (6)   
   UniProt (2)   
   RefSeq(pep) (4)   
DNA sequence (10)   
   RefSeq(nuc) (4)   
   GenBank (3)   
   EMBL (3)   
Protein domain (30)   
   Pfam (30)   
All databases (133)   

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