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KEGG   Xiphophorus hellerii (green swordtail): 116727595
Entry
116727595         CDS       T07363                                 
Name
(RefSeq) sodium channel protein type 4 subunit alpha A-like
  KO
K04837  voltage-gated sodium channel type IV alpha
Organism
xhe  Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:xhe00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:xhe04040]
    116727595
Ion channels [BR:xhe04040]
 Voltage-gated cation channels
  Sodium channel, voltage-gated (Nav)
   116727595
SSDB
Motif
Pfam: Ion_trans Na_trans_assoc IQ_SCN5A_C PKD_channel Lustrin_cystein IQ IL4
Other DBs
NCBI-GeneID: 116727595
NCBI-ProteinID: XP_032430999
Position
10:14025034..14048065
AA seq 1878 aa
MANLLPPPGIAVFRPFTQESLAEIKRLAEERKKSAEAEGHGEGEPVGPHPDLEAGKSLPL
IYGDPPPELLNTPLEDLDPFYKAQNTFVVVSKGNTIYRFNAEPACYILSPFSVIRRGSIK
ILIHSLFSMFIMITILSNCVFMTMSNPPAWSKTVEYVFTGIYTFEATVKVLSRGFCIGSF
TFLRDPWNWLDFMVISMAYITEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVGALIQS
VKKMGDVMVLTVFALAVFALVGLQLFMGNLRHKCVQWPILMNDVFNTTMAVNESMYSNSS
FDFTEYIENPENQYFTEGSKDALICGNSSDAGKCPEGYTCMKAGRNPNFGYTSYDSFGWA
FLALFRLMTQDFWENLFQLTLRAAGRTYMLFFVVVIFLGSFYLINLILAVVAMAYYEQNQ
ATQLEAIEKEEEFQRLLEQLKNQEQAQFHGSQATVTSKKSVSQHTLSETEDNGHGLKQGE
AVNDCNGRVVPRLMIRAPTMQESAVDYEVKEKSLGSMHSTLHLEEPGLKKRSASAATVLS
AVAMEELEEAQRPCPPCWYKFADMFLKWDCCPTWIVFKKWMHFVVMDPFVDLAITICIVL
NTLFMAMEHYPMTPEFDNMLSVGNLVFTGIFAAEMFFKLIAMDPYYYFQVGWNIFDSIIV
TLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAII
VFIFAVVGMQLFGKNYKDCVCKISSDCELPRWHMNDFFHSFLIVFRILCGEWIETMWDCM
EVAGPAMCLIVFMMVMVIGNLVVLNLFLALLLSSFSGDNLSAGDDDGDMNNLQIAIGRIT
RGIDWLKAFLIQRIQQILGKKPKEPDKDMVDDGKPKTEEMEMNHLDACLTLKVAEGISDG
PVQSQPSGFTVDGELNLKVPIAEGESDYDNLSDNVDDDDDDGEQDDEEEDNELPESALRR
DDEQNTKNLEDESSIPEKVKYDDGDSSVCSTADYQPPEPEPEKKEEEEPEPEEPEACFTD
DCVTKWPCLTVDTTSGKGKKWWNLRKTCFTIVEHDWFETFIIFMILLSSGALAFEDIYIE
RRRTIKIILEFADKIFTYIFVIEMLLKWVAYGFKTYFTNAWCWLDFFIVDVSLISLVANW
MGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIFNVLLVCLIFWLIFSI
MGVNLFAGKFYRCINTTTEELFPMTEVNNRTECLALEEATQEARWINVKINYDNVGTGYL
SLLQVATFKGWMDIMYAAVDSREVEEQPSYEINLYMYIYFVIFIIFGSFFTLNLFIGVII
DNFNQQKKKFGDQDIFMTDEQKKYYEAMKKLGSKKPQKPIPRPTNPVQGIVFDFISQQFF
DIFIMVLICLNMVTMMVETDDQSPEKEDFLFKLNVAFIVVFSGECVLKLFALRQYFFTNG
WNVFDFIVVILSIAGTMLSDIIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFAL
MMSLPALFNIGLLLFLIMFIFSIFGMSNFAYVKKEAGIDDIFNFETFGGSIICLFQITTS
AGWDGLLLPMLNREPPDCDPEFENPGTDVKGNCGNPGMGMMFFCSYIIVSFLVVVNMYIA
IILENFNVAQEESGDALCEEDFEMFNETWEKFDLDGTMFIEYSRLSDFCDTLQEPLRVAK
PNRLCLIGMDLPLVIGDRIHCLDVLMAVTQMVLGDTVEMAAMRDSIEAKFILSNPTKDSF
APITTTVRHKEEQQAAVVLQRAYRNHLLKRCVRHAAFMHRLKRIGRNYNNDDSPEKEGLL
ARRLGVLYGSNIDLADEMELEALETLTSQEPFNTDCLQEPPVQNMIVVPAEITSEELLHS
APYQHPLTLQANLREPLV
NT seq 5637 nt   +upstreamnt  +downstreamnt
atggcgaacctgctccctcccccaggcattgcggtcttccgcccgtttacccaggaatca
ctggcggaaatcaagaggcttgcggaggaaaggaagaaatcagcagaagcagaaggccat
ggcgagggagaaccagtggggccacaccctgatctggaagctggaaagagcctaccccta
atatatggagaccctcctccagagttgctcaacacgccgctggaggacctggaccccttc
tacaaagcccagaatacatttgtcgtggtcagcaaagggaacacgatttacaggttcaac
gctgagccggcttgttacattctcagcccctttagtgtgatcaggagaggatccatcaaa
attctcatacattcattatttagcatgttcatcatgattaccattctgtcgaattgtgtg
ttcatgacgatgagcaacccaccagcatggagtaaaactgtggaatatgtttttacagga
atttatacctttgaggctacagtcaaagtgttatcaagaggtttctgtattggttctttt
acattccttcgagatccatggaactggctggatttcatggtgatcagcatggcctacatt
actgagtttgttgaccttggcaatgtgtcagctctcaggacatttcgtgtacttcgagcc
ctgaaaacaattaccgtaattcctggcctgaagaccatagtgggggctttgatccagtcg
gtgaagaaaatgggggacgtcatggtcctgaccgtttttgcccttgcagtctttgcactc
gttggcctccagcttttcatgggaaacctgcgtcacaaatgtgtgcaatggcccattctg
atgaatgacgttttcaacactaccatggctgtaaatgagtctatgtactccaacagttct
tttgattttactgaatatattgaaaatccagaaaatcagtattttacagaaggcagcaaa
gatgctctgatttgtggcaacagctctgatgctggaaagtgcccagaaggatacacatgt
atgaaggctggaaggaaccctaactttggctacaccagttatgactcttttggatgggcc
ttccttgctctgttcaggctcatgacacaggacttctgggagaatcttttccagctgact
ctgcgagcagctgggaggacatacatgctgttcttcgtggtggtcatcttcctgggctcc
ttctacctcatcaacctcatcctagctgtggtagccatggcttattatgaacagaatcaa
gcaactcaactggaggccatcgaaaaagaggaagaattccagcggcttttagaacaacta
aaaaatcaagagcaggcacaatttcatggaagccaagccaccgtgaccagtaagaagtct
gtgagtcaacacacattatctgagacggaagataatggacatggtctcaaacagggtgag
gctgtgaatgactgcaatggaagagttgttcctcgcttgatgattcgagcacccactatg
caggagtctgctgtagattatgaagtcaaagagaagtcactgggctcgatgcacagcaca
cttcatctggaagaacctggcttgaaaaagagatctgctagtgctgcgacagtgctgtct
gcagttgccatggaagagttggaggaggctcagagaccctgtccaccttgctggtacaaa
tttgccgacatgtttttgaagtgggattgctgccccacctggattgtttttaaaaagtgg
atgcactttgtggtcatggatccctttgttgacctcgctattaccatatgcattgtgctc
aacaccctttttatggcaatggagcactaccccatgaccccagagtttgacaacatgctc
tcagtaggaaatctggttttcactgggatctttgcagctgaaatgtttttcaagcttatc
gccatggatccctattactatttccaagttggatggaacattttcgacagcattattgta
actctcagcctggtggagttgggtctggcaaatgtccagggtctatcagtcctaaggtca
ttccgtttgcttcgtgtcttcaaactggcaaagtcttggcccacactcaacatgctcatt
aagattattggtaactcagtgggagctttggggaacctgaccttggtgctggccatcatc
gtcttcattttcgctgtagtgggcatgcaactctttggaaagaactacaaggactgcgta
tgcaagatctcctcagactgtgagctaccacggtggcacatgaatgacttcttccattcc
ttcctcatcgttttccgcattctgtgtggcgagtggatcgagacgatgtgggactgcatg
gaggtggctggacctgcgatgtgcttaatcgtcttcatgatggtcatggtcattggaaat
ctagtggtattgaacctcttcttggcgttgctgctcagctcattcagcggagacaaccta
tcagcaggggatgacgatggagacatgaacaatctgcagattgctattgggagaatcaca
cgaggcatcgattggttaaaagcatttctcatacagcgaatccagcaaatacttggtaaa
aagcccaaagagccggataaggacatggtggacgatggaaagcctaaaaccgaggaaatg
gaaatgaatcatttggacgcctgtctgactcttaaagtagcagaggggatttcagatgga
ccggtgcaaagccaaccctctggattcacggtggatggagagctcaatctgaaagtccca
atcgctgaaggagaatcagattatgataatctgagtgataatgttgatgatgatgatgat
gatggtgagcaggatgatgaagaagaagataatgaacttccagagagtgcactgcggaga
gatgatgaacaaaacacgaaaaaccttgaagatgaaagtagtatcccagagaaagtaaaa
tatgatgacggggattcttcagtatgcagcacagctgattatcagcctcctgagcctgaa
ccagaaaagaaggaagaagaggaaccggaacctgaagaaccagaggcctgcttcactgat
gactgtgtgaccaaatggccatgtttgacagtggataccaccagtggcaaaggcaaaaaa
tggtggaatcttagaaaaacttgcttcaccatagtggaacacgactggtttgaaaccttc
atcattttcatgatcctccttagcagtggggctctggcctttgaagatatatacatagaa
aggcgacgaaccatcaaaataattcttgagtttgcagacaagattttcacctacattttt
gtcattgagatgctcctgaaatgggttgcatatggtttcaagacctacttcaccaacgct
tggtgttggttggactttttcattgtggatgtttccttgattagcttagttgcaaattgg
atgggctattctgacctcggtcctataaagtcgttgagaaccctcagagcactgaggcct
cttcgagcgctatcaagatttgaaggcatgagggtggtggtgaatgctcttgttggagcg
attccctccatcttcaatgtcctgctggtgtgtctgattttctggctcatcttcagcatc
atgggagtcaatttgtttgcggggaagttctaccgttgcatcaacaccaccacagaggag
ctattccccatgactgaggtcaacaatcgaaccgagtgcttggcacttgaagaagccaca
caggaggctcgctggattaacgtcaaaatcaactatgacaatgttgggacaggctacctc
tctctgcttcaagtggcaacttttaaaggttggatggacataatgtatgctgccgtggac
tcaagagaggttgaggagcaaccatcctatgaaatcaatctttacatgtacatatatttt
gtgatcttcatcatctttggttccttcttcaccctaaacctcttcatcggtgtcattatt
gacaatttcaaccaacaaaagaaaaagtttggagaccaagacatttttatgactgatgaa
cagaaaaaatactatgaggccatgaagaaactcggttccaagaagccacaaaagccaatt
ccacgaccaacgaatccggtccagggcattgtgttcgatttcatcagccagcagtttttt
gacatcttcattatggttctaatctgcctcaatatggtgaccatgatggtggaaacagat
gaccaaagcccagaaaaagaggattttctctttaaattaaacgtggccttcattgttgtc
ttctctggagagtgtgtattgaagctctttgcgttgcggcagtacttcttcaccaatgga
tggaatgtttttgatttcattgtggtcatcttgtcaatagctggtacaatgctctcagac
ataattgagaagtattttgtatccccaactctcttcagagtgatcagactagccaggatt
ggcaggattctgcgcctcattaaaggagcgaagggtattcggacacttctctttgcccta
atgatgtcccttcctgccctgttcaacattggtctcctgcttttcctgattatgttcatc
ttttccatatttggcatgtcaaattttgcctatgtcaagaaagaagctggaattgatgac
atttttaactttgagacctttggtggcagcattatctgcttgtttcagattacaacctct
gctggttgggatgggcttctacttccaatgctgaacagggaacctccagactgtgaccct
gaatttgagaatccaggcacagatgtaaagggtaactgtggaaacccggggatgggtatg
atgttcttctgcagctacattattgtttcgttcttagtggtggtcaacatgtacattgcc
atcatcctggagaacttcaatgtggctcaagaagagagcggtgatgcactttgcgaggaa
gactttgagatgttcaacgaaacttgggagaagtttgacttggatggaacaatgtttatt
gagtacagtcgactttcagatttttgtgacactttgcaggagcctctcagggtcgccaaa
cccaatcggctttgtctgattggaatggatctgcctctagttattggggataggatccac
tgcttagatgttttgatggctgttacacagatggtactgggagacacagtggagatggca
gcaatgcgggatagcattgaggctaagttcattcttagcaaccccacaaaagactccttt
gcaccaattaccacaacggtacgccacaaggaagagcaacaagctgctgtggtccttcaa
cgagcttatcgtaatcatcttctgaagcgctgcgtacgccatgctgctttcatgcacaga
ttgaaaagaattggtagaaattacaacaatgatgattcacctgaaaaagaggggctgctt
gcacgaagactaggagttctctatggaagtaatatagaccttgctgatgaaatggagctt
gaggctttagaaactctgacaagccaagaaccttttaatacagactgtcttcaggagcct
cctgtgcagaatatgattgtggttcctgctgaaataaccagtgaggagttattgcattct
gccccttaccaacatcccttaaccttacaggcaaatctgagagagccgcttgtatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (15)   

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