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KEGG   Xenopus tropicalis (tropical clawed frog): 100490404
Entry
100490404         CDS       T01011                                 
Symbol
des.2
Name
(RefSeq) vimentin A2
  KO
K07610  desmin
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    100490404 (des.2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:xtr04812]
    100490404 (des.2)
Cytoskeleton proteins [BR:xtr04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Type III
     100490404 (des.2)
SSDB
Motif
Pfam: Filament Filament_head Baculo_PEP_C DUF2968 TPR_MLP1_2 NPV_P10 CENP-Q Fzo_mitofusin Taxilin
Other DBs
NCBI-GeneID: 100490404
NCBI-ProteinID: XP_002932207
Xenbase: XB-GENE-919965
UniProt: F7BN67
Position
5:complement(82010430..82024259)
AA seq 448 aa
MSRSPERVSSYRRHFEELDCSSVVKLRVSSPSPPRNRRSASYSRVTREENASCRRTASAT
RRPRSMFVPSFGAQLGPTVDLEAASAANQEYLSTRSSEKQEMIVLNDRLTKYIERVRDLE
QENASAQCELDALRSRCYKPSNLRALYEEQLRELRREAEQAKLQRDLAVAAKVPVVDQLS
AVKKRYEDAVEARKKAEEDIEAFRPDVDAATAGRISLEKQLETLEAEISFLQRVHGEEIE
ELMKQIYNMSTSCDLAFSIPDFAAALRDIQMEYEAIAAKNLQEMDEWYKNKFVDYSQAST
KHVENVRLYRGDMANCKRSIKSKEMELNALKNRNAILEAQVKETQEKNKKEIEELQEKID
KLEDDLKTLKQKIALHLREYQDLLSVKMALDIEIATYRKLIEGEDSRLGTSVSGIHILSS
LSETLQVSTTQSISKSVERKESTTVLKS
NT seq 1347 nt   +upstreamnt  +downstreamnt
atgagccgcagcccagagagagtctcttcttaccgccggcactttgaggagctggactgc
agctcagttgtgaagctgagggttagcagcccatccccgccgaggaacaggcgatcagcc
agctacagccgggtaacacgggaggagaatgcttcctgcaggaggacagcctcggctact
cggaggccccgcagcatgtttgtccctagctttggtgctcagttgggacctacagtggat
ctggaagcagccagtgcagctaaccaggaatatctgagtaccaggagcagcgagaaacaa
gagatgattgtactgaatgatagactgactaagtacattgaaagggtgcgggatctagaa
caggagaacgcctctgcccagtgtgagttggatgctttgcgcagtcggtgctacaaacct
tccaatctaagggctctatatgaagagcagctaagggagctacgtagggaggctgaacag
gccaagctgcaaagggacttggcagtagctgctaaggtgccagtggtggatcagctcagt
gcagtaaagaaacgctatgaagatgctgttgaggcgaggaaaaaggctgaagaagatatt
gaagctttccgccctgatgtagatgctgccacagcaggacgcatatcactagaaaagcaa
ttggaaactttggaagcagagatttcttttctgcagagagtgcatggagaggagattgaa
gaactgatgaagcaaatctacaacatgagcacttcctgtgatcttgctttctccatccca
gattttgctgctgctctgagggacatccagatggaatatgaagcaatagcagccaagaac
ctgcaggaaatggacgagtggtacaaaaacaaatttgttgactacagtcaagcttctaca
aagcacgtggaaaatgtgaggctataccgaggagacatggcaaactgtaagagaagcatt
aaaagtaaagaaatggaactcaatgcacttaagaacagaaatgcaattctggaagctcaa
gtcaaagaaacccaagaaaagaacaagaaagagatagaggagttacaggaaaaaatcgat
aaattagaagatgatttgaagacactgaaacaaaaaattgctttgcacttacgagaatac
caagatttattgagtgtgaaaatggctctggatattgagattgccacatacagaaaactt
attgaaggagaggacagcagacttggtacttcggttagtggcatacacatactgagtagt
ctgtcagaaaccctacaagtaagcaccactcagagtatctccaagtcagtcgagcggaaa
gagagcacaactgtcctaaaaagttaa

  All links  
Gene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (16)   

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