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KEGG   Vulpes lagopus (Arctic fox): 121472690
Entry
121472690         CDS       T07435                                 
Symbol
RXRA
Name
(RefSeq) retinoic acid receptor RXR-alpha isoform X1
  KO
K08524  retinoid X receptor alpha
Organism
vlg  Vulpes lagopus (Arctic fox)
Pathway
vlg03320  PPAR signaling pathway
vlg04148  Efferocytosis
vlg04151  PI3K-Akt signaling pathway
vlg04659  Th17 cell differentiation
vlg04919  Thyroid hormone signaling pathway
vlg04920  Adipocytokine signaling pathway
vlg04928  Parathyroid hormone synthesis, secretion and action
vlg04932  Non-alcoholic fatty liver disease
vlg04976  Bile secretion
vlg05160  Hepatitis C
vlg05200  Pathways in cancer
vlg05202  Transcriptional misregulation in cancer
vlg05207  Chemical carcinogenesis - receptor activation
vlg05216  Thyroid cancer
vlg05222  Small cell lung cancer
vlg05223  Non-small cell lung cancer
vlg05226  Gastric cancer
vlg05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:vlg00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    121472690 (RXRA)
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    121472690 (RXRA)
 09150 Organismal Systems
  09151 Immune system
   04659 Th17 cell differentiation
    121472690 (RXRA)
  09152 Endocrine system
   04919 Thyroid hormone signaling pathway
    121472690 (RXRA)
   04928 Parathyroid hormone synthesis, secretion and action
    121472690 (RXRA)
  09154 Digestive system
   04976 Bile secretion
    121472690 (RXRA)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    121472690 (RXRA)
   05202 Transcriptional misregulation in cancer
    121472690 (RXRA)
   05207 Chemical carcinogenesis - receptor activation
    121472690 (RXRA)
  09162 Cancer: specific types
   05226 Gastric cancer
    121472690 (RXRA)
   05216 Thyroid cancer
    121472690 (RXRA)
   05222 Small cell lung cancer
    121472690 (RXRA)
   05223 Non-small cell lung cancer
    121472690 (RXRA)
  09172 Infectious disease: viral
   05160 Hepatitis C
    121472690 (RXRA)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    121472690 (RXRA)
  09167 Endocrine and metabolic disease
   04932 Non-alcoholic fatty liver disease
    121472690 (RXRA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:vlg03000]
    121472690 (RXRA)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:vlg03310]
    121472690 (RXRA)
Transcription factors [BR:vlg03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    121472690 (RXRA)
Nuclear receptors [BR:vlg03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   121472690 (RXRA)
SSDB
Motif
Pfam: Hormone_recep Nuc_recep-AF1 zf-C4 tRNA_bind_3
Other DBs
NCBI-GeneID: 121472690
NCBI-ProteinID: XP_041579918
Position
12:complement(10722057..10815781)
AA seq 476 aa
MTHSGLAHVALARSSGSWDFSTQVNSSSLNSPTGRGSMAAPSLHPSLGPGIGSSLGSPGQ
LHSPISTLSSPINGMGPPFSVISSPMGPHSMSVPTTPTLGFGTGSPQLSSPMNPVSSSED
IKPPLGLNGVLKVPAHPSGNMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKD
LTYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRGKDRNENEVESTSSA
NEDMPVEKILEAELAVEPKTETYVDANMGLNPNSPNDPVTNICQAADKQLFTLVEWAKRI
PHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIF
DRVLTELVSKMRDMQMDKSELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEAYCKH
KYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQMT
NT seq 1431 nt   +upstreamnt  +downstreamnt
atgacccattctggcctagcccacgtggccctagctcggagctctggttcctgggacttc
tccacccaggtgaactcctcatccctcaactcccccacggggcgtggctccatggccgcc
ccctcgctgcacccctctctggggcctggcatcggctcctcgcttggctccccgggacaa
ctgcactcgcctatcagcacgctgagctcccccatcaacggcatgggcccacccttctcg
gtcatcagctcccccatgggcccccactccatgtcggtgcctaccacgcccaccctgggc
ttcggcaccggcagcccccagctcagctcccccatgaaccccgtcagcagcagcgaggac
atcaagccgccgctgggcctcaatggtgtcctcaaggtcccggcccacccctcagggaac
atggcgtccttcaccaagcacatctgtgccatctgtggggaccgctcctcaggcaagcac
tacggagtgtatagctgtgagggctgcaagggcttcttcaagcggacggtgcgcaaggac
ctgacctacacctgccgcgacaacaaggactgcctgatcgacaagcggcagcgcaaccgc
tgccagtactgccgctaccagaagtgcctggccatgggcatgaagcgggaagccgtgcag
gaggagcggcagcggggcaaggaccggaacgagaatgaggtggagtccacgagcagcgcc
aacgaggacatgccagtggagaagattctggaggcggagctggctgtggagcccaagact
gagacgtacgtggatgcgaacatggggctgaaccccaattcgcccaacgaccccgtcacc
aacatctgccaggctgcggacaagcagctcttcactctggtcgagtgggccaagcggatc
ccgcatttctctgagctgcccctggacgaccaggtcatcctgctcagggcaggctggaat
gagctgctcatcgcctccttctcccaccggtccatcgccgtgaaggatgggatccttctg
gccaccggactgcacgtccaccggaacagtgcccacagcgcgggggtgggcgccatcttc
gacagggtgctgacagagctcgtgtccaagatgcgggacatgcagatggacaagtcggag
ctgggctgcctgcgtgccattgtcctcttcaacccggactccaaggggctctcgaacccg
gcggaggtggaggcactgcgagagaaggtctacgcgtccctggaggcgtattgcaaacat
aagtaccccgagcagccaggaaggtttgccaagctgctgctccgcctgccggccctgcgc
tctatcggcctcaagtgcctggaacatctcttcttcttcaaactcatcggagacacgccc
attgacaccttcctcatggagatgctggaagccccccatcagatgacttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (18)   
   KEGG PATHWAY (18)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (4)   
   Pfam (4)   
All databases (35)   

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