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KEGG   Trichinella spiralis: Tsp_06861
Entry
Tsp_06861         CDS       T01609                                 
Name
(RefSeq) voltage gated calcium channel IQ domain protein
  KO
K04851  voltage-dependent calcium channel L type alpha-1D
Organism
tsp  Trichinella spiralis
Pathway
tsp04361  Axon regeneration
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09150 Organismal Systems
  09158 Development and regeneration
   04361 Axon regeneration
    Tsp_06861
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:tsp04040]
    Tsp_06861
Ion channels [BR:tsp04040]
 Voltage-gated cation channels
  Calcium channel, voltage-gated (Cav)
   Tsp_06861
SSDB
Motif
Pfam: Ion_trans GPHH Ca_chan_IQ CAC1F_C PKD_channel
Other DBs
NCBI-GeneID: 10912054
NCBI-ProteinID: XP_003380707
Position
Unknown
AA seq 1192 aa
MNKPRANFDTFVQALLTVFQILTGEDWNAVMYNGIAAFGGVHSIGVIVCIYFIVLFICGN
YILLNVFLAIAVDNLADAESLTAAEKEEENKRANEADADDDMVVKATSDEDAVSVEQFHE
SGEVKLPFNEPTDAEDEHLASGDEDQEREMENQSQFKPTARPHRQSELNLPKKTKPIPDA
SSLFLFSSTNKVRIFCNKVINHSYFTNSVLVCILVSSAMLAAEDPLQASSFRNEVLVYGL
ILHKGSFCRNAFNLLDMLVVGVSLTSFGLKSGAISVVKILRVLRVLRPLRAINRAKGTFI
EFEGGDVTRPHVRNREWTNYDFNFDNVQNAMVALFVVSTFEGWPDLLHVAMDSSDEGIGP
QYNARVSVAIFFITFIVVIAFFMMNIFVGFVIVTFQNEGEREYENCELDKNQRKCIEFAL
TAKPQRRYIPKNRFQYKIWWFVTSQPFEYAIFIIIILNTLILGMKHYKSSAAFDEALDVL
NLFFTTVFALEFICKLFALTFKNYFGDAWNVFDFIIVLGSFIDIIYGKVSVRIGQNAKLI
YLYWISATGEAWQLIMLSCANTPTAMCDPESDDRGQPCGNDFAYPFFISFFMLCSFLIIN
LFVAVIMDNFDYLTRDWSILGPHHLDEFVRLWSEYDPDAKGRIKHLDVVTLLRKISPPLG
FGKLCPHRLACKRLVSMNMPLNSDGTVCFNSTLFALVRTNLKIYTEVSSNIEEANEQLRA
VIKRIWKRTPQRLLDEIVPPSGRDDEITVGKFYATYLIQDYFRRFKKRKEVEQKETNMQG
NITMSLQAGLRTLHEIGPEIKRAISGNLETDWSKEFEEPQHRVGKKNFKQPDQILCWDHH
VGVLQIFLARPFVVRHPCARFAGTLQAVHRRQSNQSCLFECEWGFEISGRISEFESDESV
CNKPERRCNSFFSNIRRRMDSIVSPSILLFDRVLFDSDHDSSEHEMQERVRFVPRGSKPT
GLSFEGSRWLPRKLSFRRAPIGGGAVSNLQQGNNKRLQFSNAIILDDSDPDSVLHSENVV
DLTESGDDSKPSVSPPLELRDDAYYLDGIDYNTWRPAPMGQGVRLRGRGNGRRKSRSMPL
PHHEHQRNYADVLVEKVLADQGLGRYADPNLIRTTQLEIAEAYNMTEAQMHSAARSLMQR
SPKYFEHMGGQRPADIKDFNQYSKTALLKPREINSSEEVDISDDMNMFMSVV
NT seq 3579 nt   +upstreamnt  +downstreamnt
atgaacaagcccagagcgaatttcgacactttcgtacaagccttgctcacggtatttcag
atactgactggtgaagattggaatgcggtgatgtacaacggtatagccgcgtttggaggc
gtgcattcgatcggtgttattgtttgcatatatttcattgtgctgttcatttgcggcaat
tatattctgttgaacgtcttcttggctattgcggtggacaatcttgccgacgccgagtca
ctgactgccgcggaaaaggaagaagaaaataaacgtgccaacgaagcggatgcggacgac
gacatggtagtcaaagcaacatcagacgaagatgctgtctcagtggagcagttccacgag
agcggtgaggtgaaattgccattcaacgaaccgacagacgcagaagatgaacatctggca
tctggtgatgaggatcaagaaagggaaatggaaaatcagtcgcagttcaagccaactgct
cgtcctcatcgacagtctgaattgaacttgccgaaaaagaccaaacctatacctgatgca
tcttcattgttcctgttctcttccacaaacaaagtacgcatcttttgcaacaaagtgatc
aatcattcctattttaccaactctgtgctagtatgcattttggtatcgagtgcaatgtta
gctgccgaagatcctctccaggctagctcattccgcaacgaagtgcttgtttatgggctc
attctgcacaaaggatccttttgtagaaatgctttcaatttgctcgacatgttggtggtc
ggtgtttcgttgacatcatttggactgaagagtggggcaatcagtgtggtgaagattctt
cgcgtgcttagggtacttcggcctttgagggcgattaatcgtgccaaaggcacatttatt
gagtttgaaggcggtgatgttacaagaccacatgtacgcaacagggaatggacgaattat
gatttcaattttgacaacgttcaaaatgctatggttgcactttttgtggtgtcgacgttc
gaaggttggcccgacttgctgcacgtagcaatggattcgagtgacgaaggtatcggtcct
cagtacaatgctcgtgtttctgtggctatatttttcatcacgtttatcgtggtgatcgcc
ttcttcatgatgaacatattcgtcggttttgtcattgtcacatttcaaaatgaaggtgaa
cgtgaatatgaaaactgcgagcttgacaaaaatcagcgcaaatgtatcgaatttgcactt
actgccaagccgcaacggcggtatatcccgaagaatcgatttcagtataaaatttggtgg
tttgtcacttctcagccgtttgaatacgccatattcattattataattttgaatacgctt
attcttggaatgaagcactacaaatccagcgctgcttttgatgaagctcttgatgttcta
aacttgtttttcactactgtttttgcactggaattcatatgcaaacttttcgcgttgacg
ttcaaaaattattttggtgacgcatggaacgtattcgattttatcattgttctcggcagt
tttatcgatatcatatacggcaaagttagcgtacgtattggacaaaatgcgaaactaatt
tatttatactggatatcagctactggagaagcttggcaactgataatgctttcttgcgcc
aacacaccgaccgcgatgtgcgatccagaatccgatgaccgtggtcagccgtgcggaaac
gatttcgcctatccatttttcatttcattcttcatgctttgttcatttttgattatcaat
ctgttcgtcgctgtgattatggacaatttcgactatttaacgcgagattggtccatactg
gggccgcatcatttggacgaatttgtacgactctggtcggaatatgatccggatgccaag
ggccgtatcaaacacttggacgtggtgacgttgttgcgcaagatctcgcctccgctgggc
tttggcaaactttgcccccacaggcttgcttgcaagcgtctggtctcgatgaacatgccg
ttgaattcggacggaaccgtttgcttcaactccaccctgtttgcgttggtgcggacaaat
ttgaaaatttacaccgaagtttcgagcaacatcgaagaggctaacgagcagcttcgagct
gtgatcaagcgtatttggaagcgaacaccgcaacgtctgctcgacgaaattgttcctccg
tctggacgcgacgacgaaattaccgtgggaaaattctacgccacctacttgatccaagat
tacttcaggcgattcaaaaagcgcaaggaggtggaacaaaaggagaccaacatgcaaggc
aacattaccatgtcgttgcaggccggcttgagaacattgcacgaaattggacctgaaatc
aagcgcgcaatttcgggcaatttggaaaccgactggagcaaagagttcgaagaacctcag
cacagggtaggcaaaaaaaacttcaagcaaccggatcaaattctctgctgggatcatcac
gttggtgttttgcaaatttttctagcgcgaccattcgttgttcggcacccttgtgcacgc
tttgcaggcacattacaagccgttcatcgaaggcaatctaaccaatcctgcttattcgaa
tgtgaatggggatttgaaatctcaggaaggatttctgaattcgaatccgacgaatctgta
tgcaacaagccggaacggcgctgtaattcatttttctccaacatacgtcgtcgaatggac
agcattgtctctccttcgattttattgttcgacagagtattgttcgactcagaccatgat
tcgtctgaacatgagatgcaagaacgtgtgcgatttgttccgcgcggttccaagcctacc
ggcttgtcgtttgaaggttctcgttggcttcctcggaaattgtcctttcgaagagcacca
attggtggtggtgctgtcagcaatttacagcagggcaacaacaaacggttgcaattttcc
aacgcgatcattctggacgactcagatccagattctgtactgcattcggaaaatgtagtc
gatttaactgaatcaggggatgattcgaaaccttcagtatcacctccactggaacttcga
gatgacgcttattatctcgatggtattgattataatacgtggaggccggcaccgatgggt
cagggtgtgcgattgagaggtcgaggcaatggtcgtagaaagtcccgttctatgcctttg
cctcatcatgaacatcagagaaattatgctgatgttctagttgaaaaggtactcgctgat
caaggcctaggccggtatgcagatccgaatttgatcaggactacacaactagaaatagct
gaagcttacaatatgaccgaagcacagatgcacagtgctgctcggtctcttatgcaacgt
tctccgaaatattttgaacatatgggtggccaacgccctgcggacatcaaggattttaat
cagtattcgaaaactgcccttttgaaaccacgagaaataaacagcagcgaggaagtggac
atttccgacgatatgaacatgttcatgtcggttgtgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (48)   
   KEGG ORTHOLOGY (1)   
   RefGene (44)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (59)   

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