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KEGG   Trichomycterus rosablanca: 134334790
Entry
134334790         CDS       T09921                                 
Symbol
rxrga
Name
(RefSeq) retinoic acid receptor RXR-gamma-A isoform X1
  KO
K08524  retinoid X receptor alpha
Organism
trn  Trichomycterus rosablanca
Pathway
trn03320  PPAR signaling pathway
trn04148  Efferocytosis
trn04920  Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:trn00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    134334790 (rxrga)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:trn03000]
    134334790 (rxrga)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:trn03310]
    134334790 (rxrga)
Transcription factors [BR:trn03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    134334790 (rxrga)
Nuclear receptors [BR:trn03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   134334790 (rxrga)
SSDB
Motif
Pfam: Hormone_recep zf-C4 Nuc_recep-AF1 tRNA_bind_3 DUF3043
Other DBs
NCBI-GeneID: 134334790
NCBI-ProteinID: XP_062873316
Position
20:complement(1747726..1760008)
AA seq 440 aa
MQMDQIEFMRLTGSSVQMNHSHPRTPHSHPSMLTHLHSSVISGLASPYSITTSSPYSITS
SSLGSITSSVHPTPDMGFSPQLNTLGTTVDVKPHEQMNQSYCCISPGSLSKHLCSICGDR
SSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDSKECLIDKRQRNRCQYCRYQKCLATGMK
REAVQEERQRGRDKNDNEVDSSGTLNEDIMPVEKILHAELAVEPKTEADIQTSADNINND
PVTNICQAADKQLFTLVEWAKRIPHFSQLPLDDQVILLRAGWNELLIASFSHRSVSVNDG
IVLGSGLHVHRSSAHTAGVGSIFDRVLSELVSKMKDMQMDRTELGCLRAIVLFNPVDAKG
LSSVCKVEALREKVYASLESYTKHRYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLI
GDTPIETFLMEMLETPHQIT
NT seq 1323 nt   +upstreamnt  +downstreamnt
atgcagatggatcagatcgagttcatgcgtctgacaggttcttcagtacagatgaaccac
agtcacccgaggactcctcactcccatccatccatgctaacacacctccactcatccgtc
ataagtggcctggcatcaccctactccatcaccacctcatcaccctactccatcacctcc
tcatcactgggctccatcacctcctccgtgcaccctacaccagacatgggcttcagtcct
cagctaaacacactgggcaccacagtggatgttaaacctcacgagcagatgaatcagagc
tactgctgtatcagtcctggttctctgtccaaacatctctgttccatctgtggagatcga
tcatcagggaaacattacggagtgtacagctgtgaggggtgtaaaggtttcttcaagagg
acggtgaggaaggacctgacgtacacgtgccgcgacagtaaggagtgtctgatagataaa
cgtcagaggaaccgctgccagtactgccgttatcagaaatgcctggcaacgggcatgaag
agggaagctgtgcaggaggagcggcagcgcggccgagataaaaacgataacgaggttgat
tccagcggcactctgaatgaagacatcatgccggtggagaagattctacacgctgaatta
gcagtggagcccaaaactgaagcggacatccagactagcgccgataacataaacaacgac
cccgtcaccaacatctgtcaggcggcggataagcagctgtttacgctggtggagtgggca
aagcgcatcccacacttctcacagctacctctagatgaccaggtcatccttctgagagcg
ggctggaacgagctcctcatcgcatcgttctctcatcgctcggtgtcggtgaacgacggc
atcgtgttgggttccggtctgcatgtccatcgcagcagcgcccacactgcaggagtggga
tctatattcgacagggttttatctgagctggtatctaagatgaaggacatgcagatggac
cggacagagcttggctgtctcagagccatcgttttatttaacccagtagatgctaaagga
ttatccagcgtgtgtaaggtggaggcgctcagggaaaaagtttatgcctccctggaatcc
tacaccaaacacagataccccgagcagcccggcaggtttgcgaagctgctgctgcgactg
cccgctctccgttccatcggcctcaagtgtctggaacatcttttcttttttaagctcatc
ggtgatacgccaatagaaacgtttcttatggagatgctggaaaccccacaccagatcaca
tga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (6)   
   RefSeq(pep) (6)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (5)   
   Pfam (5)   
All databases (27)   

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