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KEGG   Trichomycterus rosablanca: 134333912
Entry
134333912         CDS       T09921                                 
Symbol
scn4ab
Name
(RefSeq) sodium channel protein type 4 subunit alpha B isoform X1
  KO
K04837  voltage-gated sodium channel type IV alpha
Organism
trn  Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:trn00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:trn04040]
    134333912 (scn4ab)
Ion channels [BR:trn04040]
 Voltage-gated cation channels
  Sodium channel, voltage-gated (Nav)
   134333912 (scn4ab)
SSDB
Motif
Pfam: Ion_trans Na_trans_assoc IQ_SCN5A_C PKD_channel GPHH IQ
Other DBs
NCBI-GeneID: 134333912
NCBI-ProteinID: XP_062872150
Position
2:43471206..43525501
AA seq 1790 aa
MSKKKKMSMLELWRSNQTARVKKAKDLKLWPHQVASLRDPELVSSLVQQNVKMARLLHKT
GTTALRRFTQESLAELERCAAEEAAEQEHRKAQNIEIPEDELPKPSKYLEVGKALPFIYG
DPPSELFNIPLEELDPYYKAKKTFIVISKGNVINRFCAEPACYILSPFHPVRRIAIRILI
HSLFSMFIMLTILSNCVFMTMSDPPQWSKTVEYVFTGIYTFEATVKVLSRGFCIGDFTFL
RDPWNWLDFMVISMAYLTEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVGALIQSVKK
LADVMILTVFCLAVFALIGLQLFMGNLRNKCVVWPPRYETNLTNMNYTNGTFDFTDYINN
QDNYYFLPGTHDALLCGNSSDAGRCPEGYLCMKAGRNPNYGYTSYDNFGWAFLSLFRLMT
QDFWENLFQLTLRAAGKTYMIFFVVIIFLGSFYLINLILAVVAMAYAEQNEATIAEAKEK
EEEYARIMEQLKKQSEASMLFSCHAKYDLVDEGGGKEKTDHKNIVMKPLKDGKVSELNRS
KGTVDLIEEPDYHKRKASAVSAQSHALEELEELERPCPPCWYKFADIFLKWNCCEPWIRF
KKLVYLFVMDPFVDLGITLCIVLNTVFMAMEHYPMTPDFETVLSIGNLVFTGIFAAEMFL
KLIAMDPYHYFQVGWNIFDSIIVTMSLVELGLANVEGLSVLRSFRLMRVFKLAKSWPTLN
MLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKIAEDCELPRWHMLDF
FHSFLIVFRILCGEWIETMWDCMEVAGQSMCIIVFMMVMVIGNLVVLNLFLALLLSSFSG
DNLASSDEDGEVNNLQIAIGRITRGIDWVKAFIIRQIRCLFRLKPKKEEKSHDLVQIHTN
PESENMYKMELEKLDGSPAMSLVPIAKGEVDFKTPYDDESASENEVKFDEKIKMKSADDD
ASSTCSTVDKPPEVEEVESEEEQDSVAPVDCFTENCIRRCPCLDVDITQGKGKSWWNFRK
TCFTIVEHNYFETFIIFMILLSSGALAFEDVYIEERRVIKIILEYADQVFTYIFVVEMLL
KWAAYGFKVYFTNAWCWLDFLIVDVSLISLTANILGYSELGPIKSLRTLRALRPLRALSR
FEGMRVVVNALVGAIPSIFNVMLVCLIFWLIFSIMGVNLFAGKFYYCMNITSEEIFSIDE
VNNKTDCFLLMEDGHDVRWRNLKVNFDNVGMGYLSLLQVATFKGWMDIMYAAVDSRLVDE
QPEYETNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKSKFGGQDLFMTEEQKKYYN
AMKKLGSKKPQKPIPRPQNCFQGFVFDVVTKQFFDILIMGLICLNMITMMVETDDQSEET
EGILYFINLVFIMFFTGECVLKLIALRQYFFHVGWNIFDFIVVILSIMGLMLADLIEKYF
VSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGM
SNFGYVKKEGGIDDMFNFETFGNSIICLFMITTSAGWDGLLSPIMNSGPPDCDPYIENPG
TDVRGNCGNPAVAIVFFCSYIVMSFLVVVNMYIAIILENFNVATEESSEPLCEDDFEMFY
ETWEKFDPDASQFISYSALSDFCDTLKDPLKIPKPNTIKLISMDLPLVTGDKIHCLDILL
ALTAEVLGESGEMDMLKSSMEEKFMANNPSKVSYEPITSTLRRKHEEMAATVIQRAYRKY
RLKSTRKPSSFRFREKLPSVEVQSEFVLHSAPFTVPDSLNYEDSLRESIV
NT seq 5373 nt   +upstreamnt  +downstreamnt
atgagcaagaagaaaaaaatgtccatgctggagttgtggcgcagcaatcagactgcacgt
gtaaagaaagccaaagacctgaaactatggcctcaccaggtcgcatcgctgagagaccca
gagctggtttcgtctctggtccagcagaatgtgaagatggcacgcttgcttcacaaaaca
ggcaccacagcgctccgccgctttacgcaggagtctctggctgagcttgagcggtgtgcg
gcagaggaagctgccgagcaggagcacagaaaagcccagaacattgagattcctgaggat
gaactgcccaaaccctccaaatacctggaagttgggaaagccctgcctttcatctatgga
gaccctccatctgagcttttcaatatccctttggaggagctcgatccttactacaaagca
aagaagactttcatcgtgatcagcaaagggaatgtaatcaacaggttctgtgctgagcca
gcgtgttatattctttctccgtttcatcccgtccgcagaatagcaatccggatactcata
cactcattgtttagcatgtttatcatgttaacaatcctgtccaactgtgtgttcatgacc
atgagcgacccgccacaatggagcaaaactgtagagtatgtttttacagggatctatacc
ttcgaggcaaccgtaaaggttttgtccagagggttttgcataggagactttacattcctt
cgagatccatggaactggctggatttcatggtgatcagcatggcataccttacagagttt
gtggacctgggaaatgtttcagctctgagaactttccgtgtacttcgagcgctcaaaaca
attactgtgattcctggtctgaaaaccatcgtcggcgcactgattcagtcggtgaagaag
ttggcagatgtcatgatcctgactgtattttgtcttgccgtctttgccctcattggctta
cagctgtttatgggaaatctgcgcaacaagtgtgttgtatggcctcctagatatgagacc
aacttgactaacatgaactacacaaatggcacttttgacttcacggactacatcaacaat
caagataactactactttctgcctggtacgcatgacgcgcttctctgtggaaacagctca
gatgctgggagatgtcctgaaggatacttgtgtatgaaggccggtaggaatccaaactat
ggctacaccagctacgacaactttggttgggcctttctctctctcttccgccttatgact
caagacttctgggaaaacctgtttcagctgactctccgggcagcagggaagacctacatg
atcttctttgtagttatcatcttcttaggctccttttacctgatcaacctgattttggct
gttgtggccatggcatatgccgagcagaatgaggccacgatagctgaagctaaagagaag
gaggaggagtatgcaaggataatggagcagctcaaaaagcaatctgaggcaagcatgctg
ttctcatgccatgcaaagtatgatctggttgacgaaggaggtggtaaagaaaagaccgac
cataaaaacattgtcatgaaacccctcaaggatggaaaagtatccgaactaaatagatcc
aaaggaaccgtggacctcatagaagaaccggactatcacaagagaaaggccagtgcagtg
agtgctcaaagtcatgcattagaagaattagaagagttagaaagaccatgcccaccctgc
tggtacaagtttgcagacattttcctgaagtggaactgctgcgaaccgtggatcaggttt
aaaaagctggtttatctctttgtgatggatccatttgtggacctgggcatcacactctgc
atcgtacttaacactgtgtttatggccatggagcattaccccatgactcctgattttgaa
acagtattgagtattggaaacttggtgttcactggtatctttgcagctgagatgtttctt
aaactcattgcgatggatccataccactacttccaggtgggctggaacatatttgacagc
atcattgtgacaatgagtctcgtggagcttggcttggccaatgttgaaggattgtcagtg
cttcggtccttccgacttatgcgtgtcttcaagttggcaaagtcctggcctaccctgaac
atgctgattaagatcatcggtaactctgtgggcgccctgggcaacctgaccctcgttttg
gccataatcgtcttcatctttgctgtggtgggcatgcagctgtttgggaaaagctacaag
gaatgtgtttgtaaaattgctgaggactgcgagttgccccgctggcacatgctcgacttc
ttccactccttcctcattgtttttcgaatcctgtgtggggagtggattgaaaccatgtgg
gactgcatggaggtggcaggccagtctatgtgcattatcgtcttcatgatggtcatggtg
atcggaaacctggtggtcctgaatctcttcctggccttgctgctcagttccttcagtgga
gacaacctggcatcatcggatgaagatggtgaagtgaacaacctgcaaattgctatcgga
agaattaccaggggcatcgactgggtcaaggccttcatcatcagacagatcagatgtttg
ttccgactgaaaccaaagaaagaggagaaaagccatgatttggttcagattcacacgaat
cctgagtcagagaacatgtataagatggagctggaaaaacttgatggatctcctgccatg
tcactggttccaatagcaaagggggaggtggattttaaaaccccctatgatgatgaaagt
gcctctgagaatgaagtgaaattcgatgaaaaaataaaaatgaaaagtgcagatgatgac
gcttcatcaacctgcagcactgtggacaaacctcctgaagttgaagaagtagaatcagaa
gaggaacaagattccgtcgcaccggtggactgctttactgagaattgtatcaggcgctgt
ccgtgccttgatgtggacatcacccagggcaaaggaaagtcatggtggaactttcgtaag
acctgcttcactattgtggagcacaactactttgagactttcatcatctttatgattctt
cttagcagtggagccttggcttttgaggatgtttacattgaggagagaagagtgattaaa
ataattcttgaatatgcagatcaagtcttcacctacatttttgttgttgagatgctccta
aaatgggctgcctatggtttcaaagtttacttcactaatgcttggtgctggctggacttc
ctcattgtagatgtgtcgctgatcagcttgacggctaacattctgggttactctgagctc
ggacccattaaatccttgaggaccctgagagctctgaggccgcttcgtgctttatccaga
tttgaggggatgagggtggtggtaaatgccctggttggagctattccatccatattcaac
gtgatgctggtgtgtctgatattctggctgatcttcagcataatgggagtgaacctgttt
gctggaaagttctattactgcatgaacattacatctgaggagatattttctattgatgaa
gtgaacaacaaaaccgactgtttcttactaatggaggacggacacgatgtgcgatggaga
aatctgaaagtaaactttgataatgttggcatgggctacctgtccttactgcaagtggct
acattcaaaggttggatggatatcatgtacgctgctgtggattcacgtcttgtggatgaa
caacccgaatatgagacgaacctctacatgtacctctactttgttatttttatcatcttt
gggtctttttttaccctcaatttatttattggtgtcatcattgataatttcaaccaacaa
aagtcaaagtttggaggacaagaccttttcatgacagaagaacagaagaagtactacaat
gccatgaagaaactaggctcaaagaaaccacagaaaccaattcctcgtcctcaaaactgt
tttcaaggctttgtctttgacgtcgtgacaaagcagttttttgatatcctcatcatggga
ttgatctgtctgaacatgatcaccatgatggtggagactgatgaccaaagtgaggagact
gagggcatcttgtactttataaacctcgtcttcatcatgttctttaccggagagtgtgtg
ctcaagctcatcgcccttcgacagtacttctttcatgttggatggaatatatttgatttt
atcgtggtcattctttcaattatgggcttaatgcttgcagaccttatcgagaagtacttt
gtgtcacccactctatttcgtgtcatccgacttgcaagaattggccgtgttctgcgtcta
atccgaggcgccaaaggcatccggacacttttgtttgccctgatgatgtccctccctgcc
ctcttcaatatcggcctcctgctttttttgatcatgttcatcttttcaatatttggaatg
tctaattttggctatgtaaaaaaagaaggaggcattgatgacatgttcaattttgagacc
tttggaaacagcataatatgtctgtttatgatcacaacttctgcaggctgggatgggctt
ctctctcccattatgaacagtggaccccccgactgtgacccatacatcgaaaaccctgga
acagacgtcaggggtaactgtggcaatcctgcagtggcaatagtctttttttgcagctac
atagtgatgtctttcctagtggtggtcaacatgtacatcgccatcattctggagaacttc
aacgtagcgacagaggaaagcagcgagccgttatgtgaggatgactttgaaatgttttat
gagacctgggaaaagtttgatcctgatgcctcacaattcattagctacagtgcactttct
gatttctgtgacacactgaaggatccgctgaagattccaaagccaaacacgatcaagctg
atttccatggaccttccattggttactggagacaagattcactgtcttgacatcctcctg
gctcttacagccgaagtgcttggtgaatcaggggaaatggacatgctcaagtcaagcatg
gaggagaaattcatggcaaacaacccctcgaaggtctcatatgagccaataaccagcact
cttcgacgaaagcatgaggaaatggccgcaacagtcatccaaagagcctaccgcaaatac
agactcaagagtactcgcaaaccgagctcgttcaggttcagagaaaagctcccctctgta
gaggttcaaagtgagtttgtcttgcattcagccccctttactgtccctgactctttaaac
tatgaggacagtttaagagagtcaattgtgtag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (6)   
   Pfam (6)   
All databases (12)   

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