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KEGG   Tetraodon nigroviridis (spotted green pufferfish): GSTEN00034155G001
Entry
GSTEN00034155G001 CDS       T04346                                 
Name
(GenBank) unnamed protein product
  KO
K08524  retinoid X receptor alpha
Organism
tng  Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03320  PPAR signaling pathway
tng04148  Efferocytosis
tng04920  Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:tng00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    GSTEN00034155G001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:tng03000]
    GSTEN00034155G001
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:tng03310]
    GSTEN00034155G001
Transcription factors [BR:tng03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    GSTEN00034155G001
Nuclear receptors [BR:tng03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   GSTEN00034155G001
SSDB
Motif
Pfam: Hormone_recep zf-C4 Nuc_recep-AF1 tRNA_bind_3
Other DBs
NCBI-ProteinID: CAG12025
UniProt: Q4RHV7
Position
8
AA seq 370 aa
MHSISSSEDIKPPFGLRPVPAHSPGLMMSQKRMCVICGDRSSGKHYGVYSCEGCKGFFKR
TVRKDLSYTCRDNKECLVDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRNREREGELEF
SVSVNEEMPVEKILAAETAVEQKTELHSDGVSSGNSPHDAVSNICQTADKQLFALVEWAK
RIPHFSELPLEDQVILLRAGWNELLIASFSHRSINSKDGVLLASELQRDSANSAGVGAIF
DRENVQSAEVGAIFDRVLTELVNKMRDMQMDKTELGCLRAIVLFNPDAKGLSKSSEVELL
REKVYASLEAYCKQRYPEQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLM
EMLEAPHHLS
NT seq 1110 nt   +upstreamnt  +downstreamnt
atgcactcaattagcagctcagaagatatcaagcctcccttcggcttgaggcctgtgcca
gctcacagtcccggactgatgatgtctcagaaacgcatgtgtgttatttgtggagaccgt
tcttctgggaaacactacggcgtgtacagctgtgagggctgtaaaggtttctttaaaaga
accgtgcgcaaagacctgagctacacctgcagggacaacaaagagtgtctggtggacaaa
cgccagcgcaaccgctgccagtactgccgctatcagaagtgcctggccatgggcatgaag
agggaagcggtccaggaggagcgccagaggaacagagagcgcgaaggggagctggagttc
agcgtcagcgtgaacgaggagatgcccgtggagaagatcttggcggcagagacggccgtg
gagcagaaaactgagctacactctgacggcgtttcctccggcaactctcctcatgatgca
gtgtccaacatctgccagaccgcagacaaacagctgtttgctttagtggagtgggcaaag
agaatccctcacttctctgaactaccactggaggaccaggtcattctcctccgcgcaggc
tggaacgagctgctcatcgcgtcattctcccaccgctccatcaattccaaagatggagtc
ctgctggcgtctgagctccagcgggacagcgcgaacagcgcgggagtgggcgccatcttt
gacagggagaatgtgcagagtgcagaagtcggggccatctttgacagggtcctgaccgag
ctcgtcaataaaatgagagacatgcaaatggacaagacggagctcggctgcctgcgagcc
atcgtcctcttcaacccagatgcaaaaggactttccaaatccagtgaggtggagctgctc
agagagaaggtctatgcctcgctggaggcctactgcaaacagagatacccagagcagcag
ggaaggttcgccaagctcctcctgcggctgccggccctgcgatccatcggcttgaagtgc
ttggagcacctgttcttcttcaagctgatcggtgacacacctatcgacactttcctcatg
gaaatgcttgaagctccccatcatttgtct

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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