[go: up one dir, main page]
More Web Proxy on the site http://driver.im/
KEGG   Tachysurus fulvidraco (yellow catfish): 113637670
Entry
113637670         CDS       T08119                                 
Symbol
rxrab
Name
(RefSeq) retinoic acid receptor RXR-alpha-B isoform X1
  KO
K08524  retinoid X receptor alpha
Organism
tfd  Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03320  PPAR signaling pathway
tfd04148  Efferocytosis
tfd04920  Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:tfd00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    113637670 (rxrab)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:tfd03000]
    113637670 (rxrab)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:tfd03310]
    113637670 (rxrab)
Transcription factors [BR:tfd03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    113637670 (rxrab)
Nuclear receptors [BR:tfd03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   113637670 (rxrab)
SSDB
Motif
Pfam: Hormone_recep zf-C4 Nuc_recep-AF1 tRNA_bind_3
Other DBs
NCBI-GeneID: 113637670
NCBI-ProteinID: XP_026994259
Position
9:complement(11892194..11935174)
AA seq 504 aa
METKPFLSLGFLKSPCSVAPPCVQGRLGDAGSSPSGCYCFTGTCPLHHRRISTDSSGQQS
SSPLSSPTGHRSVGPHALHPSLLTPSSIGSTPGQLHSPINGLTSPFPVISSAMGHPSITG
PSSTSMAFGPSLSPQLSSPMTSVSSPEDVKPPLGLNGVMKIPAQPTGTSLSLTKHICAIC
GDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCPIDKRQRNRCQYCRYQKCLAM
GMKREAVQEERQRAKEKSEAEMELAGCASEDMPVEKILEAELAVEPKTETYVEGSIGAAA
NSPNDPVTNICQAADKQLFTLVEWAKRIPHFSDLPLDDQVILLRAGWNELLIASFSHRSI
SVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKSELGCLRAIVLFNP
DSKGLSNPTEVESLRERVYASLEAYCKQKYPDQPGRFAKLLLRLPALRSIGLKCLEHLFF
FKLIGDTPIDTFLMEMLEAPHQMT
NT seq 1515 nt   +upstreamnt  +downstreamnt
atggaaaccaaacctttcttgtcgctagggttcctgaaaagcccgtgttcagtagcgccg
ccctgtgtgcagggccggttgggcgatgctggcagctcgccttcgggctgctactgcttc
acgggcacatgcccactgcaccatcgcaggatatccacagactcatcaggccagcagtcc
tcgtctcctctgagctccccgactggtcaccgttctgttggccctcacgcacttcaccca
tccctgctcaccccgtcttccataggctccacaccgggtcagcttcactcacccatcaat
ggcctaacatcacccttccctgtcatcagctcagccatgggtcatccctccatcacaggg
ccttccagcaccagtatggccttcggacctagtctcagtccacaactcagctcccccatg
acttcagtcagcagcccggaagatgtcaaacctcctctgggcctgaacggtgtcatgaag
attccagctcagccgacaggcacctctctctctctcaccaaacacatttgtgctatttgt
ggcgatcgatcttcaggtaaacactatggcgtgtacagctgcgaaggttgcaaaggcttc
ttcaagcgcacagtgaggaaagacctgacttatacctgtcgagacaacaaggactgtccg
atcgacaaacgtcagcgcaaccgctgccagtactgccgctatcagaagtgtctggccatg
ggcatgaagagagaagctgttcaggaggagcgtcagcgggcgaaagaaaagagtgaagct
gaaatggagctggcgggctgtgccagcgaagacatgccagtggagaagattctggaagca
gagctggcagtggagcccaaaactgaaacctatgtggaaggcagcattggtgcagctgcc
aactctcccaacgaccctgttacaaacatttgccaagctgctgataagcagctcttcaca
ttagtggaatgggcaaagaggataccacacttttctgacctgcctttagatgaccaggtt
attcttttacgagcagggtggaacgagctcctcatcgcttctttttcacaccgctcgata
agtgtgaaagatggcatattgttagcaacaggcctccatgtccatagaaacagtgcgcat
agcgccggagtaggtgccatttttgatagagtgctgaccgagctggtgtctaagatgcga
gacatgcagatggacaagtctgagcttggatgcctgagagctattgttcttttcaatcca
gactctaaaggcctgtctaacccaacagaggtggagtcacttagagagagagtatatgct
tcactggaggcctactgtaaacagaaataccccgatcagcctgggagatttgctaaactg
cttctccgactgcctgctttgcgttccatcgggctgaagtgtctggagcacctctttttc
ttcaaactcattggagacacacccattgacacttttctaatggaaatgctagaggcacca
caccaaatgacataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system