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KEGG   Triplophysa dalaica: 130418186
Entry
130418186         CDS       T09616                                 
Symbol
rxrga
Name
(RefSeq) retinoic acid receptor RXR-gamma-A
  KO
K08524  retinoid X receptor alpha
Organism
tdw  Triplophysa dalaica
Pathway
tdw03320  PPAR signaling pathway
tdw04148  Efferocytosis
tdw04920  Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:tdw00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    130418186 (rxrga)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:tdw03000]
    130418186 (rxrga)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:tdw03310]
    130418186 (rxrga)
Transcription factors [BR:tdw03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    130418186 (rxrga)
Nuclear receptors [BR:tdw03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   130418186 (rxrga)
SSDB
Motif
Pfam: Hormone_recep zf-C4 Nuc_recep-AF1 tRNA_bind_3
Other DBs
NCBI-GeneID: 130418186
NCBI-ProteinID: XP_056600160
Position
3:complement(10901033..10922408)
AA seq 441 aa
MDNNDTYLHLSSSLQVTHGHLSSPPSHPPLSSMVTHHHPSIINGIGSPYSVITSASLGSP
ASMPTTSGMGYGALHSPQMNSLNSVSSSEDIKPPPGLAGLGSYSCGSPGSLSKHICAICG
DRSSGKHYGVYSCEGCKGFFKRTIRKDLTYTCRENKDCQIDKRQRNRCQYCRYQKCLAMG
MKREAVQEERQRGREKSDNEVESSSSFNEEMPVEKILDAELAVEPKTEAYLTEASTDNTT
NDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSVTVK
DGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKMKDMQMDKTELGCLRAIVLFNPDAK
GLSNPSEVEGLREKVYASLEAYTKHKYTEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKL
IGDTPIDTFLMEMLEAPHQIT
NT seq 1326 nt   +upstreamnt  +downstreamnt
atggataataacgacacgtatctacatctcagttcttctttgcaggtaacccacggccac
ctgagctctcctccgtcccaccctcctctcagctcgatggtgacccaccaccacccgtcc
atcatcaatggcataggatcaccctactcagtcatcacctctgcatcgctgggctcgccg
gcctccatgcccaccacctcaggcatgggctatggagcactccacagtccacagatgaac
tctctaaacagtgttagcagctcagaagatattaaacctcctccaggattggccggactg
gggagttactcatgcggcagtccagggtctctctctaaacacatctgtgctatctgtgga
gaccgttcctcagggaaacattatggtgtttacagctgtgagggctgcaaggggtttttc
aagagaaccatccggaaagacctcacgtacacgtgtcgagagaataaagattgtcagatt
gacaagcgccagcgtaaccgttgccagtattgccgctatcagaaatgtctagccatgggt
atgaagagagaagcggtgcaggaggagaggcagcgcggtcgagaaaagagtgacaatgag
gtggagtccagcagcagctttaatgaagagatgccagtggagaagatcctggacgctgag
ctcgctgtagaacccaagactgaagcttacctgactgaagccagcactgacaacacgaca
aatgacccggtgaccaacatctgccaggccgctgacaagcagctctttactcttgttgaa
tgggctaagagaatcccacatttctctgaactacctctggatgatcaggttattctgctg
cgggcaggttggaatgagctgcttatagcttcgttctcacaccgatctgtaaccgttaaa
gatggaatcctgttggccactggcctgcatgtccatcgcagcagtgctcacagcgcagga
gtgggctccatatttgacagggtattaacagagcttgtgtctaagatgaaggacatgcag
atggataaaacagagttgggctgtctcagggctattgtcctcttcaacccagatgcgaaa
ggattgtcaaacccatcagaggtggagggattaagggaaaaggtgtacgcctcgctggag
gcctacaccaaacacaaatacaccgaacagccgggcaggtttgccaagctgctcctgcgt
ctgcctgctctgcgttccatagggctgaagtgcctggagcacctgttcttcttcaagctc
atcggagacacgcccatagacactttcctaatggagatgctggaagcgccgcaccagatc
acatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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