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KEGG   Tachysurus vachellii: 132858097
Entry
132858097         CDS       T09596                                 
Symbol
rxrga
Name
(RefSeq) retinoic acid receptor RXR-gamma-A isoform X1
  KO
K08524  retinoid X receptor alpha
Organism
tvc  Tachysurus vachellii
Pathway
tvc03320  PPAR signaling pathway
tvc04148  Efferocytosis
tvc04920  Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:tvc00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    132858097 (rxrga)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:tvc03000]
    132858097 (rxrga)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:tvc03310]
    132858097 (rxrga)
Transcription factors [BR:tvc03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    132858097 (rxrga)
Nuclear receptors [BR:tvc03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   132858097 (rxrga)
SSDB
Motif
Pfam: Hormone_recep zf-C4 Nuc_recep-AF1 tRNA_bind_3
Other DBs
NCBI-GeneID: 132858097
NCBI-ProteinID: XP_060744285
Position
15:complement(16042746..16051314)
AA seq 428 aa
MDHTEYLHLSSSVQVDHSHLRPASHTPISSMVTHRHPSVISGIASPYSIITSSSSLSSTT
SSTPNMGFNPQMNTLDASRDVKPPASINNSYQSISPGSLSKHLCAICGDRSSGKHYGVYS
CEGCKGFFKRTVRKDLTYTCRDSKECLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQR
GRDKNDNEVDSSCSLNEEMPVEKILDAEISVEPKTDTYIQINADNSTNDPVTNICQAADK
QLFTLVEWAKRIPHFSQLPLDDQVILLRAGWNELLIASFSHRSVSVKDGIVLGTGLHVHR
NSAHTAGVGSIFDRVLSELVSKMKDMQMDKTELGCLRAIVLFNPDAKGLSSPSEVEALRE
KVYASLESYTKSKYPDQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEM
LEAPHQIT
NT seq 1287 nt   +upstreamnt  +downstreamnt
atggatcatactgaataccttcatctgagttcttcagtacaggttgaccacagtcaccta
aggccagcctcccacacacccatcagctccatggtaacacaccgccacccgtctgtcata
agcggtattgcatctccttactccatcatcacctcctcctcatcactgagctcaaccacc
tccagcacacctaacatgggctttaatcctcagatgaacaccctggatgcttcaagagat
gttaaacctcctgctagcatcaataacagctaccagagcattagtccaggctctctgtcg
aaacatctgtgtgccatttgtggagatcgctcttctggtaaacactatggagtatacagc
tgtgaaggctgcaagggtttcttcaagagaaccgtccggaaggacctgacatacacgtgc
cgggacagtaaggagtgtttaatagataagaggcagaggaaccgctgccaatactgccgc
tatcagaaatgcctggcaatgggaatgaagagggaagctgtgcaggaagaaagacaacgt
ggacgagataaaaatgacaatgaggttgattccagctgcagtttaaatgaagaaatgccg
gtggaaaagattttagatgctgaaatatccgtggagccaaaaacagacacctacatccag
attaatgcagacaactcaactaacgaccctgtcaccaacatctgccaggcagctgataaa
cagctcttcaccctggtggagtgggcaaaacgtatccctcacttctcacagctacctctg
gatgaccaggtcatcctcctacgagcaggctggaacgagcttctcattgcttcgttctct
catcgctctgtgtcagtgaaagatggtattgtgttaggcacagggctgcatgtccatcgc
aacagcgcccacactgcaggagtgggatcaatctttgacagggttctttctgagctggtg
tctaaaatgaaggacatgcagatggacaagacagagctcggctgcctcagagccatcgtt
ctcttcaacccagatgccaaaggtttatccagtccatctgaggtagaggcactgagggaa
aaggtttacgcctcactggagtcatacaccaagagcaaatatccagaccagccgggcagg
tttgcgaagctcctgcttcgtcttccagctcttcgctccatcggccttaagtgtctggag
catcttttcttctttaagctcatcggcgatacaccgatagacacgttcctcatggagatg
ctggaagcaccacatcaaattacgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (18)   

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