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KEGG   Tachysurus vachellii: 132841569
Entry
132841569         CDS       T09596                                 
Symbol
scn4aa
Name
(RefSeq) sodium channel protein type 4 subunit alpha A
  KO
K04837  voltage-gated sodium channel type IV alpha
Organism
tvc  Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:tvc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:tvc04040]
    132841569 (scn4aa)
Ion channels [BR:tvc04040]
 Voltage-gated cation channels
  Sodium channel, voltage-gated (Nav)
   132841569 (scn4aa)
SSDB
Motif
Pfam: Ion_trans Na_trans_assoc IQ_SCN5A_C PKD_channel A_deaminase_N
Other DBs
NCBI-GeneID: 132841569
NCBI-ProteinID: XP_060719917
Position
2:24037937..24061790
AA seq 1837 aa
MAKMVPTTRTKVFRRFTPESLAEIEKFIEEQKIREEREEVDLETRPTAPSSDLEAGKTLP
MIYGDPPEELLNTALEDIDPFYKTQKTFIVITKGNTIYRFNAEPSCYMISPFNLVRRAAI
RVLIHSLFSMFIMITILSNCVFMTMSNPPAWSKIVEYVFTGIYTFEATTKVVSRGFCIGS
FTFLRDPWNWLDFMVISMAYITEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVGALIQ
SVKKMVDVMILTVFALAVFALIGLQLFMGNLRHKCIRWPISNSTTDDYNSTLTDEFNPTF
INTTFDFTAYIENEDNQYFLEGSLDALLCGNSSDAGKCPEGFTCMKAGRNPNYGYTSYDT
FGWAFLALFRLMTQDYWENLFQLTLRAAGKTYMIFFVVVIFLGSFYLINLILAVVAMAYD
EQNQATIAEAREKEEEFQRMLEQLKNEEQQLQVGSMVSLASQRTQSNGSEIGTDDGDDVI
KDCNGRFIPRLVIHRAPTLKKSASADEQNADSKSMCSQHSMMHLENPGLSQRTASAISVR
STREELEEAQRPCPPGWYKFADIFLKWDCCEPWIIFKKWVNFVVMDPFVDLGITICIVLN
TLFMAMEHYPMSPGFEHVLTVGNLVFTGIFTAEMVFKLIAMDPYYYFQVGWNIFDSIIVT
LSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIV
FIFAVVGMQLFGKSYKECVCKIAEDCTLPRWHMNDFFHSFLIVFRILCGEWIETMWDCME
VAGAGMCLVVFLMVMVIGNLVVLNLFLALLLSSFSGDNLSASDEDGEMNNLQIAIGRITR
GVNWVKSFIVSFVGRLLCRKPSEGDARGDECDDTDKKESFSLNNLDEGKIADGLTNCLDA
LSLNVPIAKAESDDEDEDSQASSEEEGTHKKKGVLNDGDSSVCSTVDYKPPEPPPEEEEE
EEPEPDDPEACFTEDCVRRFPCLTVDITQGRGKSWWNLRRACYTIVEHDYFETFIIFMIL
LSSGALAFEDIYIERRRVIKIILEYADKVFTYIFVIEMLLKWVAYGFKTYFTNAWCWLDF
LIVDVSLISLTANLLGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMN
VLLVCLIFWLIFSIMGVNLFAGKFYRCINTSTEELVPIELVNNKSDCIALMLTNETRWVN
VKVNYDNVGFGYLSLLQVATFKGWMDIMYAAVDSREVEEQPSYEINIYMYLYFVIFIIFG
SFFTLNLFIGVIIDNFNQQKQKFGGEDLFMTEEQKKYYNAMKKLGSKKPVKPIPRPANKI
QGLVFDLISQQFFDIFIMVLICLNMVTMMIETDDQSMEKEYVLYQINLIFIVVFTGECIL
KMVALRQYFFTVGWNVFDFIVVILSIAGLMLSDIIEKYFVSPTLFRVIRLARIGRVLRLI
KGAKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFAYVKKEAGVDDIFNFETF
GNSILCLFEITTSAGWDGLLLPMLNSGPPDCDPDIENPGTEVRGNCGNAGMGIMFFCSYI
IMSFLVVVNMYIAIILENFNVAQEESGDLLCEDDFEMFNETWERFDTEGTQFLDYNHVFA
FVDALQEPLRIHKPNRIALVNMDLPVVIGDKIHCLDILLAVTQHVLGDTTEMAAMRVSIE
EKFKMNNPSKASFEPIVTTLRRKEEEQAAIRIQQSYRKHLLKRSIRHASFLHRSTKRKVR
QHEAEEPPETEGLIARKMNALYGSNAELAMALEHKSRPTPVKPASSGLTVPVNHQRAQGR
QRVVPVEVTNEVILRSAPTTTQDSSRREVATAKESKL
NT seq 5514 nt   +upstreamnt  +downstreamnt
atggcgaagatggtccctaccacacgcaccaaagtgttccgccgcttcactccggaatca
ctggcggagatcgagaagttcatcgaggagcagaaaatcagggaggaaagagaggaagtg
gatctagagaccaggccaacagcaccaagcagtgacctggaggcagggaagactctgccc
atgatctacggagatccaccagaggagctgctaaacacggctttagaagacatcgacccc
ttctacaaaacacaaaaaacatttattgtaatcaccaaaggcaacacaatctacaggttt
aatgcagaaccgtcctgttacatgatcagcccatttaatctcgtaagaagagccgccatt
agagttctcatacattcgttatttagcatgttcatcatgatcactattctctccaactgt
gtgtttatgacgatgagcaaccctcctgcctggagtaaaattgtggagtatgtctttact
ggtatatatacctttgaggcaacaactaaagtggtgtcgcgaggcttctgcattgggtct
tttacattccttcgtgatccatggaactggctggatttcatggtgatcagcatggcgtac
atcactgagtttgttgaccttggcaacgtatcggcacttcggacgttccgtgtgctcaga
gctcttaaaacgatcactgttattcctggcttaaagaccattgttggagctctgatccag
tctgtcaagaagatggtggatgtgatgattctgaccgtctttgccctggctgtttttgcc
ctcattggcctgcagctgttcatggggaatctgcgccacaagtgtatacgctggcccatt
tcgaacagcacgacggacgactacaactccaccctaacggatgaattcaaccccactttc
atcaacactacttttgacttcacagcctatattgaaaatgaagataaccagtactttctg
gagggcagcttagatgctttactatgtggcaacagttctgatgctggaaagtgtccggaa
gggttcacgtgcatgaaggctggaaggaacccgaattacggttacaccagctacgacact
tttggctgggctttcctcgctctctttaggctcatgactcaggactactgggagaactta
tttcaactgactcttcgtgcagctgggaaaacctacatgattttttttgtggtggtcata
tttctgggatcattctacctcatcaacctaatcctggcagtagttgccatggcgtatgat
gaacagaaccaagccacaattgctgaagcccgggaaaaagaggaagaatttcagagaatg
ctggagcagcttaagaatgaagagcaacagttgcaagttggtagcatggtatcattggcc
agtcagagaacacaaagcaatgggtcagaaatagggacagatgatggggacgatgtaata
aaggactgtaatggcaggtttattcctcgtctggtgatccatagagccccaactttgaaa
aaatcagcatcagccgacgagcaaaacgctgacagtaaatccatgtgctcccagcatagc
atgatgcacctggaaaaccctgggctctctcagagaacagccagtgccattagtgtacgc
agcacaagggaagagttggaggaggcccagaggccttgtcctccaggctggtataagttt
gcggatatatttttgaagtgggactgctgtgaaccctggattatcttcaagaaatgggtt
aattttgtggtgatggatccttttgtggaccttggcattaccatttgtatcgtactcaat
acacttttcatggctatggagcactatcccatgagtccaggatttgagcatgtgctcact
gttggcaacttggtgttcactggtattttcactgctgaaatggtgttcaagctcattgcc
atggacccttactactacttccaggtgggatggaacatttttgacagcatcatcgtcact
cttagcctggtggagttaggcctggccaatgtgcagggtctgtctgtcctcaggtccttc
cgtttgctgcgagtctttaagctggctaaatcctggcccacgctcaacatgctgatcaaa
atcattggtaactcagtgggtgcactggggaacctgactttggtgctggccatcattgtc
ttcatctttgccgttgtaggcatgcagctctttggcaagagctacaaggagtgtgtgtgt
aagatcgcagaggactgcacgctgccgcgctggcacatgaacgattttttccattcgttc
ctcatcgtcttccgcatcctgtgtggcgaatggattgaaacgatgtgggactgcatggag
gtggccggagcaggcatgtgccttgtagtgttcctcatggtcatggtcataggaaaccta
gtggtgctgaacctgttccttgccttgctgctcagctcgttcagtggggacaatctatca
gccagtgatgaagatggagagatgaacaatctccagatcgcaatcggccgcatcaccagg
ggcgtcaactgggtcaaatcctttatcgtcagctttgtaggccggttattgtgcaggaaa
ccttccgagggcgatgcaagaggagacgaatgtgacgatacagataaaaaggaaagcttt
tcattaaacaaccttgatgaagggaagatagcagatgggttgaccaactgtctggatgct
ctgtctctgaatgtaccgattgccaaagctgagtctgatgatgaagatgaagattcgcag
gcttcatcagaagaagagggtacacacaaaaagaagggtgttttgaatgatggagactct
tcagtgtgtagcacagtggactacaaacctccagaacctccacctgaggaagaggaggaa
gaggaaccagagcctgatgatccagaagcttgttttactgaagactgtgtgagacgattt
ccatgtctgactgtggacatcactcagggaaggggaaagagttggtggaatctgcgcaga
gcttgctacaccatagtggagcatgattactttgaaaccttcatcatcttcatgattctt
ctcagtagtggtgcactggcctttgaggacatttacattgagcgtcgcagggtgattaag
attatcttggagtatgcagacaaggtcttcacatatatttttgttatagagatgttactg
aaatgggttgcatatggcttcaagacttacttcaccaatgcctggtgctggctagatttt
ttaatcgtcgatgtgtcacttatcagtttaacagcaaatttgttgggttattcagagctg
gggcctataaagtctctcagaactcttagggctcttcggcctttacgtgccctatccaga
tttgaaggaatgagggtggtagtcaacgcattggttggtgccattccttccatcatgaac
gtgctcctggtgtgtctaatattctggctgatattcagtatcatgggggtcaacctgttt
gctggaaaattctaccgctgcattaataccagcacagaagaacttgtccctattgagcta
gtgaacaacaagagtgactgcatagcactaatgctcactaatgaaacacgctgggtcaat
gtcaaggtcaactatgacaatgtgggcttcggttacctttccctgctacaagtggccaca
tttaaaggctggatggacattatgtatgctgcagtggattctagagaggtggaagaacag
ccatcatatgagattaacatttatatgtatctgtattttgtcatcttcatcatctttggc
tccttcttcaccctcaaccttttcattggtgtcatcattgacaattttaatcagcaaaag
caaaagttcggtggggaagatctgttcatgactgaggagcagaaaaagtactacaatgcc
atgaaaaagctgggttccaagaagcctgtcaaacccatacctcgccctgcgaataagatc
cagggcttggtctttgacctcatatctcagcagttctttgacatcttcatcatggttctc
atttgcctcaacatggttaccatgatgattgagacagatgaccaaagtatggagaaagaa
tacgttctctatcagattaacctcatctttattgtcgtattcaccggggagtgcatcctc
aaaatggtggcgctgagacaatacttcttcactgttggatggaatgtgtttgatttcatc
gttgtcatcctttctatagctggtctcatgctgtcagacataattgagaagtactttgtg
tccccaacgctgttccgtgtcatccgtctggctagaattggccgtgtgctgcgtcttatc
aaaggggcgaaaggaatcaggacgcttttatttgctctgatgatgtcacttcctgccctg
ttcaacatcggcctgcttctcttcctcatcatgtttatcttttccatttttggcatgtct
aacttcgcctatgtaaaaaaggaggctggcgttgatgacatttttaactttgagaccttt
gggaatagcatcctttgcctatttgagatcacgacttcagctggttgggatgggttactg
ctcccaatgttaaacagcggtcctcctgactgtgatcctgacattgaaaaccctggaaca
gaggtgaggggcaactgtggcaatgcaggcatgggcataatgttcttctgcagttacatt
atcatgtctttcttagtggtggtcaacatgtacattgccatcatcctggagaacttcaat
gttgcccaggaggagagcggtgacctgctatgtgaggacgactttgagatgtttaatgag
acttgggaaaggtttgacacagaagggacgcagtttttggattacaaccacgtgtttgcc
tttgtcgacgcactgcaagaacctttgcgtattcacaaaccgaacagaatcgctctggtc
aatatggatctgccggtcgtaattggcgacaaaatccactgtctagatattttgctggcc
gtcacccaacatgtcctcggagacactactgagatggcagccatgagggtgagcattgag
gaaaagttcaagatgaacaacccaagtaaggcctcctttgagcccatcgtcaccactctg
aggagaaaggaggaggagcaagcagccattcggatccagcaatcgtaccgtaaacatctc
ctcaaacgctctatccgtcacgcatccttcttgcatcggtccacgaaaagaaaagtgagg
cagcatgaggctgaggagccacccgaaacagagggtttgatagcacgcaagatgaatgct
ctctacggaagcaatgcagagctggctatggctttggagcataagtctaggcctacgcca
gtcaaacccgcttcatctggtctcacagtgccagtaaaccaccagcgggcccaaggccga
cagagagtagtgccagtagaagtaacgaatgaagtaattctccgttctgcacccacaact
acacaggactcttcgaggcgagaggtggccacagcaaaagaatccaaattatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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