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KEGG   Salvelinus namaycush (lake trout): 120065363
Entry
120065363         CDS       T07522                                 
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1D-like
  KO
K04851  voltage-dependent calcium channel L type alpha-1D
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh04010  MAPK signaling pathway
snh04020  Calcium signaling pathway
snh04218  Cellular senescence
snh04260  Cardiac muscle contraction
snh04261  Adrenergic signaling in cardiomyocytes
snh04270  Vascular smooth muscle contraction
snh04530  Tight junction
snh04912  GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:snh00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:snh04040]
    120065363
Ion channels [BR:snh04040]
 Voltage-gated cation channels
  Calcium channel, voltage-gated (Cav)
   120065363
SSDB
Motif
Pfam: Ion_trans CAC1F_C Ca_chan_IQ GPHH PKD_channel DUF2975
Other DBs
NCBI-GeneID: 120065363
NCBI-ProteinID: XP_038872224
UniProt: A0A8U1FA63
Position
Sna20:complement(40973706..41112068)
AA seq 2096 aa
MSANGPAPVALASAPATTPVAPPVAAPVAAPTAAPVPVPTVPVGALAQKKRAQYAKSKKQ
GSNANTRPARALFCLKLNNPIRRACISLVEWKPFDIFILIAIFANCMALAVYIPFPQDDS
NSTNHDLETVEHVFLVIFTIETFLKIIAYGLVAHQNAYVRNGWNMLDFVIVVVGLFSVVL
ELLTKDSVETKEEAEAGAAAAAAAAALHPSAHGHGGKSGGFDVKALRAFRVLRPLRLVSG
VPSLQVVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFIGKMHATCFFPSTGMIAEDD
PAPCAISGHGRQCPINGTECREGWHGPNNGITNFDNFLFAMLTVFQCITMEGWTDVLYWM
NDAMGLELPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQLEE
DLKGYLDWITQAEDIDPENEDEEGNEEGKRNRVTLADLTEKKKGSRFGWFSQSSDTHASM
PASETESVNTENVTEDEVKTPCCGPFCQKISKSKFSRRWRRWNRFCRRKCRLAVKSVPFY
WLVIILVFLNTLTISSEHYMQPDWLTQVQDVANKVLLGCFTCEMMTKMYSLGLQAYFVSL
FNRFDCFVVCGGITETILVELAIMSPLGISVFRCVRLLRIFKVTRHWQSLSNLVASLLNS
MKSIASLLLLLFLFIIIFSLLGMQVFGGKFNFDETQTKRSTFDNFPQALLTVFQILTGED
WNAVMYDGIMAYGGPSSSGMIVSFYFIILFICGNYILLNVFLAIAVDNLGDAESLNAPRD
KKEEKKEDLVPVEEEEENAAAEEEEEPEVPAGPRPPISELVKKEKITPIPDGSAFFIFSK
TNPIRVGCHKLINHHIFTNLILVFIMLSSVSLAAEDPIRNFSARNIILGYFDYAFTAIFT
VEILLKMTTYGAFLHKGAFCRNTFNLLDLLVVGVSLVSFCIQSSAISVVKILRVLRVLRP
LRAINRAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMFACIGVQLFKGKFYRCTDEAKSS
PDECKGTYIHFKDGDVNQPAIQKRVWHNSEFNFDNVLMAMMALFTVSTFEGWPSLLYKAI
DSNRENLGPIYNYRIEISIFFIIYIIIIAFFMMNIFVGFVIVTFQEQGEKEYKNCELDKN
QRQCVEYALKARPLRRYIPKNPYQYKFWYVVNSTGFEYIMFVLIMLNTLCLAVQHYGQSA
TFNYVMDILNMVFTAVFTAEMVLKLIAFKPRNTEDSARISITFFRLFRVMRLVKLLSRGE
GIRTLLWTFIKSFQALPYVALLIAMLFFIYAVIGMQVFGKVAMVDGTHINRNNNFQTFPQ
AVLLLFRCATGEAWQEIMLACVSGKLCDPESDYNPGEEMTCGASFAYIYFISFYMLCAFL
IINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWSEYDPEAKGRIKHLDVVTLLRRIQP
PLGFGKLCPHRVACKRLVAMNMPLNSDGTVMFNATLFALVRTALKIKTDGNLEQANEELR
AVIKKIWKRTSMKLLDQVVPPAGDDEVTVGKFYATFLIQDYFRKFKKRKEEGLVGVHASQ
NNTAIALQAGLRTLHDIGPEIRRAISCDLQDDELVDFIPEEDEEIYRRNGGLFGNHVNHV
NGDHHRRSSSHQTNATQRPLQVQPPPHYAHMEQPVGRLCRANAMSHPNHHHHHHHHNSSY
GKSPKSTNINLNNANVSSLPNGGGHHHRYYEHAPPPANGYPGHRGGPYYPDYDKPPPRGT
PQGQRRRYYETYVRSHVGDVRHPTIRREEEFDDDRYSGEYYSGEEFYEDDSMLSGDRRSY
KEYLDRYQNSDTEYETPRGYHHPDSYYDDDEQPLYQDGRRSPKRRMLPATPQGHRRPSFN
FECLRRQGSQDELPHQRTALPLHLMQHQVMAVAGLDSSRAHRLSPTRSTRSWATPPATPA
SKEQSPYYTPLIRVDLPGRRESASSSQVSVRKSSWYTDDPEYSQRTYSPVHLQLPPEYRQ
HYHQKRGSATSLVEAVLISEGLGRYAKDPKFVAATKHEIADACEMTIDEMESAASHLLNG
GVAPAVNGVNVYPVMSERDYDLQDATASYSDEEPEVELRLPYEEDLADEMICITTL
NT seq 6291 nt   +upstreamnt  +downstreamnt
atgagcgccaacgggcccgcccctgtggccctggcttcagccccggctacaaccccagtc
gccccaccggttgcagctccggtagctgcccccacggctgccccggtcccggtgccgacc
gtcccggtgggcgcgttggcacaaaagaagcgggcgcagtacgccaaaagcaagaagcag
ggcagcaacgccaacaccaggcctgccagggccctgttctgcctcaaacttaacaaccct
atacgaagagcctgcatcagcctggtggagtggaagccatttgacatctttatattaatt
gctatatttgccaactgtatggccttagctgtgtatatccccttccctcaggatgactcc
aactccaccaaccatgacctggaaacggtagaacatgtcttcctcgtcattttcactata
gagaccttcctgaagattatcgcctatggtttagtggcgcaccagaacgcatatgtgaga
aacggatggaacatgctggattttgtcatcgtcgttgttggactgttcagtgttgtcctg
gagcttttgaccaaagactctgtagagacgaaggaggaggcagaggcgggtgcggcggcg
gcggcggcggcggcagcgctccacccctccgcgcacggccacgggggaaagtcgggcggc
ttcgacgtcaaagccctccgagccttccgtgtactgcgacccctacgcctggtctcagga
gtgcccagtttacaggttgtgttgaactccattattaaagccatggtccctctcctccac
atcgccctgctggtcctgtttgtcatcatcatctacgccatcatcggccttgagctcttc
attggcaaaatgcacgctacctgcttcttccccagcacaggcatgatagcggaggatgac
ccggctccgtgtgcgatctcagggcacgggcgccaatgtcccatcaatggcaccgagtgc
agggagggctggcacggccccaacaacggcatcaccaactttgacaacttcctgttcgcc
atgttgacggtgttccagtgcatcaccatggagggctggacagacgtcctctactggatg
aatgatgctatgggtctagagcttccatgggtctactttgtttctcttgtcatcttcggc
tccttctttgttctaaacctggttctgggagtgttgagcggagagttttccaaggagaga
gagaaggccaaggccagaggagacttccagaagctgagagagaagcagcagctggaggag
gatctgaagggttatctggactggatcacacaggctgaagacatcgacccagagaacgag
gacgaggagggcaacgaggagggaaaacgcaaccgggtgactctggctgacctcacagag
aagaagaaaggaagcaggtttgggtggttcagccagtcctccgacactcatgcgagtatg
ccagccagtgagacggagtcggtgaacacagagaacgtgaccgaggatgaggtgaagaca
ccgtgctgtggacctttttgtcaaaaaatttcaaagtcaaagttcagtcggcgctggcgt
cgctggaacaggttctgccgcaggaagtgccggttggcagttaaatcggtgcctttctat
tggctggtgatcatcctggtgtttctcaacacactcaccatctcctcagagcactacatg
cagcctgactggctcactcaagtacaggacgtggcaaacaaggttctgctgggatgtttt
acgtgtgagatgatgaccaagatgtacagtctgggcctgcaggcctacttcgtgtccctg
ttcaaccgctttgactgctttgtagtgtgtggaggcatcacagagaccatcctggtggag
ctggccatcatgtctcctctgggcatctctgtgttccgctgtgtccgccttctcaggatc
ttcaaggtcacacgtcactggcagtctctcagtaacttggtggcatcgctgctcaactcc
atgaagtccatcgcctccctgctgctcctgctcttcctcttcatcatcatcttctccctg
ctgggcatgcaggtgttcggaggcaagttcaactttgacgagacacagaccaagaggagc
accttcgataacttcccccaggcactgctcactgtgtttcagatcctgacgggtgaagac
tggaacgctgtgatgtatgacggcatcatggcgtacggtggcccttcctcatcagggatg
atcgtctccttctacttcatcatcctcttcatctgcggaaactacatcctgctgaacgtc
ttcttggctatcgctgtggacaacctgggagacgcggagtctctcaacgctccacgagac
aaaaaggaagagaaaaaggaagacttggtgccagtggaggaagaagaggagaatgctgca
gcggaggaggaggaggagccggaggttccagcagggccacgcccacccatctctgaactg
gtcaagaaggagaagatcacccccatccctgatggcagcgccttctttatcttcagcaag
accaacccgatccgggtgggatgtcataaactcatcaatcaccacatcttcaccaacctc
atcctggtcttcatcatgctcagctctgtctccctcgctgcagaggaccccatacgcaac
ttctctgctcgcaacatcatacttggttactttgactatgctttcacggctatctttact
gttgagatcctgttgaagatgaccacatacggggcgttcctccataaaggggcgttctgt
aggaacaccttcaacctgctggatctgctggtggtgggggtctccctggtctccttctgc
atccagtcctctgccatctcagtggtgaagattctgagggtcctgcgtgtgcttcggccc
ctgagggctatcaacagagccaaaggtctcaagcacgtagtccagtgtgtgtttgtggcc
atcaggaccatcggtaacatcatgatcgtcaccacgctgctgcagttcatgtttgcctgc
ataggagtacagctctttaaggggaagttttaccgctgtacagacgaagccaagtccagc
ccagacgaatgcaagggcacctacatccattttaaggacggggacgtgaaccagccggcc
atccaaaagagagtgtggcacaacagcgagttcaactttgacaacgtgctgatggccatg
atggctcttttcaccgtgtctaccttcgagggctggccttcgttgctctacaaggccata
gactctaacagggagaacctgggtcccatctacaactaccgcatcgagatctccatcttc
ttcatcatctacatcatcatcatcgctttcttcatgatgaacatcttcgtcggcttcgtc
atcgtcaccttccaggagcaaggagagaaagagtacaagaactgtgagcttgataagaac
cagcggcagtgtgtggagtatgccctgaaggcccgtccgttgaggaggtacatccctaag
aacccctaccagtataagttctggtacgtggtcaactccacagggtttgagtacatcatg
ttcgtcctcatcatgctcaacacgctctgcctggctgtgcagcactatggccagtctgca
acatttaactatgtgatggacatcctcaacatggtcttcactgctgttttcactgcagag
atggtgctcaaactcatcgccttcaaacctcggaacacggaggacagtgctcgcatctcc
atcaccttcttccgactgttccgagtcatgcgattggtcaagctgctgagtagaggggag
ggcatccgcaccctcctgtggaccttcatcaagtcctttcaggctctgccctatgtcgcc
cttctgatcgccatgctcttcttcatctatgctgtcatcggcatgcaggtgttcgggaag
gtagccatggtggatggcacccacatcaacaggaacaacaactttcagaccttccctcag
gccgtgttgttgctctttaggtgtgccacgggggaggcgtggcaggagatcatgttggcg
tgtgtgtctggaaagctgtgtgacccagagtctgactacaaccctggagaggagatgacc
tgtggagccagcttcgcctacatctacttcatcagcttctacatgctctgtgcattcctg
attatcaatttgtttgtggctgtcatcatggacaactttgactatctgactcgtgattgg
tcgatcctgggtcctcaccacttggacgagtttaagaggatctggtctgagtatgaccca
gaggccaagggcaggattaaacatctggacgtggtcactctgctccgacgcattcagcct
cctctgggcttcggcaaactctgtcctcatagagtggcctgcaagagactggtggccatg
aacatgcctctaaacagcgacggcaccgtgatgttcaatgctaccctatttgcattagta
cgcacagccttgaagatcaaaactgatggtaatctggagcaggccaacgaggagctgaga
gcggtcatcaagaagatctggaagaggaccagtatgaagctactggaccaagtggtgccc
cctgctggtgatgatgaggtaaccgtggggaagttctatgccaccttcctgatacaggac
tactttaggaaattcaagaaacgtaaagaggagggcctggtaggggtgcacgcctcccag
aacaacacagccatcgctctacaggctggccttcgcacgctacatgatatcgggcctgaa
attcgacgagcgatatcatgtgacctgcaagatgacgagctagtagactttattccagag
gaggacgaggagatttataggcgcaacggcggcctgttcggtaaccacgtcaaccacgtg
aacggggaccaccaccggcgctcatcgagtcaccaaaccaacgccacccagcggcccctg
caagtgcagccgcctccgcactacgcccacatggagcagccggtggggcgtctctgccgg
gccaatgccatgtcccaccctaaccaccaccatcaccaccaccaccacaactcctcctac
ggcaagtcgcccaagtccaccaacatcaacttgaacaatgccaacgtgtccagtctgccc
aacggaggagggcaccaccaccgctactacgagcacgctccgccccccgcaaacggttac
cctggacaccgtggcggcccctactaccccgactacgacaagccacctcctcgcggcacg
ccgcaaggacaaagaaggcgctactatgagacctatgttaggtcccacgtaggagacgtc
cgccacccgaccatccggcgggaggaggagtttgacgatgacaggtactcaggagagtac
tatagcggggaggagttctacgaggacgacagcatgttgtcaggagacaggaggtcctat
aaagaatacctggacaggtaccagaacagtgacacagagtatgagactcctagaggctac
caccaccccgacagttactatgacgacgatgagcagcccctctaccaagatggaaggagg
tcgcctaagagacggatgcttcctgccacgcctcaaggtcaccggaggccctccttcaac
tttgagtgcctgagaaggcaaggcagtcaggacgagctaccacaccaacgcactgcacta
ccactgcacctaatgcagcaccaggtgatggctgtagcagggctggactccagcagagcc
caccgtctctcccccacccgctccacccgctcctgggccactccccccgccactccggcc
agtaaggaacagtcgccctactacacgcccctcatcagggtcgatctccccggacgcagg
gagagcgcctccagcagccaggtgtctgtgaggaagagttcgtggtacacagacgaccca
gagtactcccagaggacctactcccccgtccacctccagctgcctccagagtaccgacag
cattaccaccagaagagaggcagtgctaccagcctggtggaggcggttttgatatcagag
gggctcgggagatacgccaaggatccaaagttcgtggcggccaccaagcacgagatagcg
gacgcatgcgagatgaccattgacgagatggagagcgcggccagccacttgctgaacggc
ggtgtggcgccggcggttaatggggtcaacgtgtaccccgtcatgagcgagcgggactac
gacctccaggacgccacggccagttacagtgacgaggagccggaggtggagcttagatta
ccgtacgaggaggacctggcagacgagatgatctgcatcaccactttatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (8)   
   KEGG PATHWAY (8)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (23)   

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