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KEGG   Salvelinus namaycush (lake trout): 120045796
Entry
120045796         CDS       T07522                                 
Symbol
scn4aa
Name
(RefSeq) sodium channel protein type 4 subunit alpha A
  KO
K04837  voltage-gated sodium channel type IV alpha
Organism
snh  Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:snh00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:snh04040]
    120045796 (scn4aa)
Ion channels [BR:snh04040]
 Voltage-gated cation channels
  Sodium channel, voltage-gated (Nav)
   120045796 (scn4aa)
SSDB
Motif
Pfam: Ion_trans Na_trans_assoc IQ_SCN5A_C PKD_channel IQ GPHH IQCJ-SCHIP1 ATP-synt_B
Other DBs
NCBI-GeneID: 120045796
NCBI-ProteinID: XP_038846656
UniProt: A0A8U0QLN6
Position
Sna4:complement(23737769..23769069)
AA seq 1873 aa
MAPLLPPTGADAFRRFTPESLAEIERLMEEKRIAAEVEGYVDDGPSEPSKDLEAGKGLPM
IFGDAPTEMLNTPLEDIDPFYKAKKTFIVITKGNTIFSMFIMITILSNCFFMTMSDPPSW
SKTVEYVFTGIYTFEASCKVLSRGFVVGPFTFLRDPWNWLDFMVISMAYVTEFVDLGNVS
ALRTFRVLRALKTITVIPGLKTIVGALVQSVKKMVDVMILTVFALAVFALIGLQLFMGNL
RNKCVRWPILNSTVFDDYNSTSSLDGTMGFGETSNFTVPFDFKEYISNIENHYYLEGSLD
ALLCGNSSDAGRCPEGFMCIKAGRNPNYGYTSYDSFGWAFLSLFRLMTQDYWENLFQLTL
RAAGKTYMIFFVLVIFLGSFYLINLILAVVAMAYDEQNEATLKEAQDMEEEFQRLLEQYR
IQEQADAAAGSQATLTSRKELSHHSGSYGGSADDEQSLGDDVIKDCNGRIVPRLAIVPVS
SESEVSDELKEDSMFHLEQPGLKNRSASAVSVLTTVMEELEDAQKPCPPGWYKFADTFLK
WDCCVPWVWLKKWLLFIVMDPFVDLGITICIVLNTLFMAMEHYPMSPEFDHMLSVGNLVF
TGIFTAEMVFKLCAMDPYYYFQVGWNIFDSIIVTFSLVELGLANVQGLSVLRSFRLLRVF
KLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKIATDC
ELPRWHMHDFFHSFLIVFRILCGEWIETMWDCMEVAGAGMCLVVFMMVMVIGNLVVLNLF
LALLLSSFSGDNLSSDDDGEMNNLQIAIGRINWGIDWVKAFVRHMVLQLLGKKATGDKEG
GEGIEGNPEKETFGLNHLDTCQDSKMADGMTNCVDGLQADGEMSLNVPIAQGEPDFENDD
DDSGSFTSDEENGHGDHVKLLGAVGDESSVCSTLDYVPEPEPVEEEEEEEPEPEEPEACF
TDGCIARWPCLTFDVSQGRGKKWWNLRRTCFTIVEHDYFETFIVFMILLSSGALAFEDIY
IERRRTIKIILEYADKVFTYVFIIEMLLKWVAYGFKTYFTNAWCWLDFLIVDVSLVTLGA
NWMGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVNALIGAIPSIFNVLLVCLIFWLIF
SIMGVNLFAGKFYRCINTTTEELFPITEVNNRSDCLALQHATQEARWVNVKVNYDNVGLG
YLSLLQVATFKGWMDIMYAAVDSREVEEQPSYEINLYMYIYFVIFIIFGSFFTLNLFIGV
IIDNFNQQKKKISAIFMTEEQKKYHEAMKKLGSKKPVKPIPRPTNMIQGAVFDFITQQFF
DIFIMVLICLNMVTMMVETDDQSEEKENVLYKINLAFIVVFTCECLLKMFALRHYFFTIG
WNIFDFVVVILSVAGIMLSDIIEKYFVSPTLFRVIRLARIGRVLRLIKGAKGIRTLLFAL
MMSLPALFNIGLLLFLIMFIFSIFGMSNFAYVKKQAGIDDIFNFQTFGSSIICLFEITTS
AGWDGLLLPILNSGPPDCDPDIENPGSDVRGNCGNPGMGIMFFCSYIIMSFLVVVNMYIA
IILENFNTAQEESGDLLCEDDFVMFEETWEKFDLEGTQFIEYAKLSEFCDTLQEPLRIAK
PNRIKLISMDLPLVTGDKIHCLDILLAVTQEVLGEGVEMTAMKVSIEAKFNMNNPTTDSY
EPITTTLRRKEEEAAAVIIQRAYRKHLLKRSILHASFMRRSKRQIRREENEEPPETEGLL
VRKMNVLYGSDLDLAAEMELAGLRAQPISVPLVSNRPSDLPKQTQTTRPEPGRPLLLVVP
VEVTSEVVLHSAPVTSDPPLDLPEQTQPSGSEPTGLEPTWPEPAGPNLLVFPVEVTPYSR
SHESIDNLRESIV
NT seq 5622 nt   +upstreamnt  +downstreamnt
atggcacccctgctccctcccacaggcgctgatgcgttccgccgcttcaccccggaatcc
ctggcagagatcgagaggctcatggaggaaaagcgaatagccgcggaagtagaagggtac
gtagatgatgggccgtcggagcccagcaaagacctggaagccggcaagggtctgcccatg
atctttggagacgccccaacggagatgctcaacacacctctggaggacatagaccccttc
tacaaagcaaagaagacctttatcgtcatcaccaaaggaaacacaatcttcagcatgttc
atcatgattaccattctgtcgaactgcttttttatgacgatgagcgacccaccgtcatgg
agtaaaactgtggagtatgtttttactggtatttatacatttgaggcctcatgcaaagtg
ttgtcaagaggctttgttgtcggaccttttacattccttcgagatccatggaattggctg
gatttcatggtgatcagcatggcgtacgtcacagagtttgttgatctaggaaacgtgtca
gcccttaggacgttccgtgtactccgagcccttaaaacaatcactgtgatacctggatta
aaaaccatcgtgggcgccctggtccagtctgtaaagaaaatggtagacgtgatgatcctc
actgtgttcgccctggccgtgtttgcactcatcggcctgcaactcttcatgggaaatttg
cgcaacaagtgtgtccgatggcccatcctcaactcaacggtgttcgacgattacaactcc
acctcgtcgcttgacggcaccatgggtttcggcgaaacatcaaatttcactgttcctttc
gatttcaaggagtacatcagcaatatagagaatcactactatttggaaggtagtctggat
gctcttctctgcggaaacagctctgatgctgggaggtgcccagaaggattcatgtgcata
aaggctgggagaaaccccaactacggctacaccagctacgactccttcggctgggccttc
ttgtccctcttcagactcatgacgcaggactactgggagaacctgttccaactgacactt
cgagcagcggggaagacgtacatgatcttctttgtgctggtcatcttcctgggttccttc
tacctcatcaacctcatcctggccgtggttgccatggcctacgatgagcagaacgaggcc
actctgaaagaggcgcaggatatggaggaggagtttcagaggcttctggagcaatacagg
atccaagagcaagctgatgctgctgctggaagtcaggcgaccctgaccagtcggaaagag
cttagtcatcactctgggtcatacgggggctctgcggatgacgagcagagcctcggagat
gatgttatcaaggactgtaatgggagaatcgtgccccgtctggccatcgtaccagtgtcc
tctgagtcggaggtcagtgacgagctcaaagaggacagcatgttccatctggagcagcca
ggcctgaagaacagatcggcgagtgctgttagtgttctcaccaccgtcatggaggagctg
gaagacgcccagaagccttgtccgcccggctggtacaagtttgccgacacgttcctgaag
tgggactgttgcgtgccctgggtatggttgaagaagtggttgctctttattgtgatggac
cccttcgtggacctaggcatcaccatctgcatcgtgctcaacaccctcttcatggccatg
gagcactaccccatgagcccagagtttgaccacatgctctccgtggggaacctggttttc
accgggatcttcacagcagagatggtcttcaagctttgcgccatggatccctactactac
ttccaggtcggctggaacattttcgacagtatcattgtcacgttcagtctggtggagtta
ggtctagccaatgtccaaggcctgtccgttctcaggtctttccgtttgctgcgtgtcttc
aaactagccaagtcgtggcccacgctcaacatgctgatcaagattattggcaactctgtg
ggcgctctgggcaacctgaccttggtgctggccatcatcgtcttcatcttcgccgtggtg
ggcatgcagctcttcggcaagagctacaaggaatgcgtgtgtaagattgccaccgactgt
gagttgccgcgttggcacatgcacgacttcttccactcattcctcatcgtgtttcgcatc
ctgtgcggggagtggatcgagaccatgtgggactgtatggaggtggccggagccgggatg
tgcctggtggtcttcatgatggtcatggtcatcggaaacctggtggtgctgaacctcttc
ctggccttgctgctcagctcattcagtggagacaacctgtccagtgatgacgacggtgag
atgaacaacctccagatcgccatcggcaggatcaactggggcatcgactgggtgaaagcc
tttgtccgccacatggtcctgcagctactgggcaaaaaagccaccggggacaaggaaggg
ggtgaggggatcgaaggaaaccccgaaaaggagacctttggactaaaccacttagacacg
tgccaggattccaagatggccgacgggatgaccaactgtgtggacgggcttcaggcagac
ggcgagatgagcctcaatgtgcccattgcccagggggagccggactttgagaacgatgat
gatgacagtgggtcttttacatcagatgaagaaaatggacatggtgatcacgtaaagttg
ttgggtgcagtgggtgacgagtcctcggtctgcagcacgctggactatgtacctgaacca
gagcctgtggaagaggaggaagaggaggagccagagccagaggaaccagaagcttgcttc
actgatggctgtatcgcgcgatggccgtgtctgacatttgacgtctctcagggcagaggc
aagaagtggtggaacctccgcaggacctgtttcaccatcgtggaacacgactactttgag
accttcatagtcttcatgatcctcctaagcagtggagctctggcttttgaggatatttac
attgagaggcgaagaactatcaaaatcatcctggagtatgcagacaaagtcttcacctat
gtctttatcattgagatgctcttaaaatgggtggcgtacggcttcaagacctacttcacc
aacgcttggtgttggctggacttcctaattgtggatgtttccttagtcactttaggagct
aactggatgggctactctgaacttggaccaatcaagtctcttcgaacactcagggctcta
aggccacttcgagccctgtcaagatttgagggaatgagggtggtggtaaacgctcttatc
ggcgccatcccctccatcttcaacgtgctgctggtgtgcctcatcttctggctcatcttc
agcatcatgggggtcaacctgtttgccggaaagttctaccgctgcatcaacaccaccacg
gaggagctgttccccatcaccgaggtcaacaacaggagcgactgccttgccctgcagcac
gccacccaggaagcccgctgggtcaacgtcaaagtcaactacgacaacgtgggcttgggc
tacctctctctgctgcaagtggccacatttaaaggctggatggacatcatgtatgctgca
gtggactctcgagaagtggaggagcagccctcgtatgagatcaacctctacatgtacatc
tactttgtcatcttcatcatcttcggctccttcttcaccctcaatcttttcattggtgtt
attattgacaatttcaaccagcaaaagaaaaagataagcgccatctttatgacagaggag
cagaagaaatatcatgaagccatgaagaaacttggctcgaagaagccagtgaagcctatc
ccaaggcctacgaacatgattcaaggcgctgtgtttgacttcatcactcagcagttcttt
gacatcttcatcatggtcctcatctgcctcaacatggtcaccatgatggtggagacggac
gaccaaagcgaggagaaggaaaacgtcctttacaagatcaacctggccttcatcgtagtt
ttcacctgcgagtgtctgctcaagatgtttgcccttcgccattacttcttcaccatcgga
tggaatatttttgattttgtcgtggtcatcctgtccgtcgcgggtataatgctgtcggac
atcatagagaagtactttgtgtcacccaccttgttcagggtcatcaggctggctaggata
ggcagggtcctgcgtctcatcaaaggtgccaagggcattcggacgctgttatttgcgttg
atgatgtcactccctgccctgttcaacatcggcctcctgctcttcctcatcatgttcatc
ttctccatattcggcatgtccaactttgcctatgtcaaaaaacaggcgggcatcgacgac
atcttcaatttccagacgttcggcagcagtattatctgcctgtttgagatcaccacctct
gcgggttgggatggtcttctgctgccaattctaaacagcggtcctccagactgcgaccca
gacattgagaacccgggctcggacgttcggggcaactgcggcaacccaggcatgggtatc
atgttcttctgcagttacatcatcatgtccttcctggtggtggtcaacatgtacatcgcc
atcatcctggagaacttcaacacggcccaagaggagagcggggacctgctgtgcgaggat
gactttgtgatgttcgaagagacctgggagaagttcgaccttgagggcacgcagttcatc
gaatacgccaagctgtcagagttttgtgacaccctgcaggaacccctgcgtatcgccaag
cccaaccggatcaagctgatctcgatggacctgcccctggtcacgggcgataagattcac
tgcctggacatcctgctggccgtcacccaggaggtgctgggcgaaggggtggagatgacg
gccatgaaggtgagcatcgaggccaagttcaacatgaacaaccccacgacagactcctac
gagcccatcaccaccacgctgcggcgcaaggaggaggaggcagcagccgtgatcatccag
cgggcttaccgcaagcacctgctcaagcgctcaatcctgcatgcctccttcatgcgccgc
tccaagaggcagataaggcgggaggagaacgaggagcccccggagacggagggacttctg
gtgcgaaagatgaacgtgctctatgggagcgacctggaccttgccgcagagatggaattg
gctgggttgcgagcacaacccatatcggtccctttggtgtccaatcggccatcggacctt
cccaagcaaacacagaccaccaggccggagcctggcagaccactcctcttggtggtcccc
gttgaggtcaccagtgaggtggtgttacactcagcccctgtgacgtctgatccaccattg
gacctcccagagcaaacacaaccatcagggtcggagcccacagggctggaacctacctgg
ccggagcctgctgggccaaacctcttggtgttccccgtagaggtcaccccctattcgcgt
agccatgagtcaatagacaacctgcgagagtcgattgtataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

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