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KEGG   Salvelinus namaycush (lake trout): 120034082
Entry
120034082         CDS       T07522                                 
Name
(RefSeq) sodium channel protein type 4 subunit alpha B-like
  KO
K04837  voltage-gated sodium channel type IV alpha
Organism
snh  Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:snh00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:snh04040]
    120034082
Ion channels [BR:snh04040]
 Voltage-gated cation channels
  Sodium channel, voltage-gated (Nav)
   120034082
SSDB
Motif
Pfam: Ion_trans Na_trans_assoc IQ_SCN5A_C PKD_channel IQ Zip GPHH Trimer_CC
Other DBs
NCBI-GeneID: 120034082
NCBI-ProteinID: XP_038836436
UniProt: A0A8U0Q5C4
Position
Sna41:2052913..2088671
AA seq 1922 aa
MDKLRDPGVVAFLAQQNAKMVALLPPTGTEVFRRFTLESLAEIERRMAEEAEEQERKKAL
NIEVAEEDLPKPAVDLEAGKALPFIYGDPPPELFNTPLEELDPFYKSHKTFIVITKGNTI
FRFNAEPACYILTPFSILRRGSIKILIHSLFSMFIMLTIMSNCVFMTMSDPPAWSKTVEY
VFTGIYTFEATVKVLSRGFCVGDFTFLRDPWNWLDFMVISMAYLTEFVDLGNVSALRTFR
VLRALKTITVIPGLKTIVGALIQSVKKLADVMILTVFCLAVFALVGLQLFMGNLKQKCVY
WPPVEWRLNSTDMDNITVAFNDTDGFNDVMGYSGTNSSNSTWDFKAYIDDKVNHYFLPGM
LDPLLCGNASDAGNCPEGYTCMKAGGNPNYGYTSYDSFGWAYLALFRLMTQDFWENLFQL
TLRSAGKTYMIFFVVVIFLGSFYLINLILAVVAMAYAEQNEATMAEAKEKEEEYAMIMVQ
LKERREAEVKERHDRHHEHHEHAEVAGSQTSLSSRTSKKKKGEKADQEVADDEACTSSSL
YSEAIKDSNGGLVISPNANKVLADQESAVVLKRARDPKGSEDQLEVAGLQRKTPSSSSVY
SQDAMDDLEEELRPCPPCWYKCSDIFLKWNCCVPWVTFKKWMYFIVMDPFVDLGITICIV
LNTMFMAMEHYPMTPEFEEVLSVGNLVFTGIFTAEMVLKLFAMDPYYYFQVGWNIFDSII
VTMSLVELGLANVEGLSVLRSFRLMRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAI
IVFIFAVVGMQLFGKSYKECVCKISLDCELPRWHMHDFFHAFLIIFRVLCGEWIETMWEC
MEVAGQGMCLVVFMMVMVIGNLVVLNLFLALLLSSFSGDNLAAPEEDGEMNNLQIATSRI
TRGIDWAKAYIIEQVWIIIGKQPKEDGDGADGNGGSNGDVDGLPKDSLALKNVNSSDNPK
ADLELKMLDVWIDDVNPSGFLTNDNLTLDVPIAKMESDDDEDDCSEEEEGEGANGNAKED
TELKKPIAPDNASSICSTVDNPPEVEEEEEEEADPTSPENCWTEKCIGRCPCLDFDITTG
KGKTWWNFRKACFLIVEHNYFETFIIFMILMSSGALAFEDIYIEQRRTIKIILEYADQVF
TYVFIIEMLLKWVAYGFQAYFTNAWCWLDFLIVDVSLISLTANILGYAELGPIKSLRTLR
ALRPLRALSRFEGMRVVVNALVGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKYYYCFNT
TSEERFSADVVNNKTECFQLMEGNDDVRWMNAKVNYDNVAMGYLSLLQIATFKGWMDIMY
GAVDSRFVEDQPIYEDNVYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGKDIF
MTEEQKKYYNAMKKLGSKKPQKPIPRPQNKFAGLIFDLITQQFFDIFIMVLICLNMVTMM
VETDGQSKEKEDILFLINLVFIIVFTTECILKLIGLRQYFFSVGWNIFDFVVVILSIVGL
LLADLIEKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFL
IMFIFSIFGMSNFAYVKKEAGIDDMFNFETFGNSIICLFMITTSAGWDGLLSPILNSRPP
DCDPDVENPGTDVRGNCGSPGLGICFFCSYIIMCFLVVVNMYIAIILENFNVATEESGDP
LCEEDFEMFYETWEKFDPDASQFIAYDILSEFCDTLKDPLRIPKPNAIKLITMDLPIVPG
DKIHCLDILLALTTEVLGESVEMDAMKESMEEKFMANNPSKVSYEPITTTLRRKQEEVAA
VVIQRAYRKHLLRRSMKLASYKYREKKALTKEDEAPPETEGMIAIRMNKLYGSQQSLGVD
DTVVDMDSHEKRESNELTETQPPVETAEEPPPVELQNEILLHSAPFVIPVSIRNSQLKES
DV
NT seq 5769 nt   +upstreamnt  +downstreamnt
atggacaagctgagagaccccggtgtggttgcatttctcgcccagcagaatgccaagatg
gtcgccctgctccctcccacaggcaccgaagtgtttcgccgcttcacccttgagtcgctg
gcggagatcgagaggcggatggccgaagaagcagaggagcaggagagaaaaaaggccctg
aacattgaggtggcagaggaggacctgccaaagccagccgtcgacctggaggccggcaag
gccctgccattcatctacggagacccgccacctgaactgttcaacacgcccctggaggaa
ctggatcctttctacaaatcacacaaaacctttattgtcatcaccaaagggaatacaata
ttcaggttcaatgctgagcctgcctgctatattctaacacccttcagtattctcaggaga
ggatccatcaaaattctcatacattcattatttagcatgttcatcatgttaacaatcatg
tccaactgtgtgttcatgacgatgagtgaccctccggcatggagtaaaactgttgaatat
gttttcactggtatctatacctttgaggcaacagttaaagtgttgtccagaggcttctgt
gttggagatttcacattccttcgagatccatggaactggctggattttatggtgatcagc
atggcgtacctcacagagttcgttgacctgggcaacgtgtctgccctcaggacgttccgt
gtgctccgagcccttaaaacgatcactgtaattcccggtctgaaaaccattgtgggcgct
ttgatccagtcggtgaagaagctggctgatgtgatgatcctgacagtgttctgcctggct
gtgttcgctctggtcggccttcaactgttcatgggaaacctgaagcagaagtgtgtttac
tggccccctgtggaatggcgtttgaactctaccgacatggacaacatcactgtggccttc
aacgacaccgatggttttaatgacgtcatgggctacagtggcacaaacagcagcaacagc
acgtgggacttcaaggcgtacatcgacgataaagtgaaccattacttccttcctggaatg
ttagaccctcttctttgtggaaacgcttctgatgctggaaattgccctgaaggatacacg
tgtatgaaggccggagggaatcccaactatggatacacaagctacgacagttttggatgg
gcctaccttgccctatttcggcttatgacacaggacttctgggaaaatctattccagctg
actcttcgctcagcagggaaaacatacatgattttctttgtggtggtgatcttcctgggc
tcgttctacctgatcaacctgatcctggctgtggtggccatggcgtatgcggagcagaac
gaggccaccatggccgaggccaaggagaaggaggaggagtacgccatgatcatggtgcag
ctgaaggaacggagagaagcggaggtcaaagagagacatgacaggcatcatgaacaccat
gaacacgctgaagttgctggcagtcagacgtcactgtccagtagaacgtctaagaaaaag
aaaggtgaaaaggcagatcaagaggtcgctgatgatgaggcgtgtacgtcctccagcctt
tatagcgaggctataaaggactccaacggaggcctcgtgatcagtcccaacgccaacaag
gtcctggcagaccaggagtctgctgttgtgttgaagagggcccgtgatcccaaggggagc
gaggaccagctggaagtagcaggcctgcagaggaagacacccagttcatccagtgtttac
agccaagatgccatggacgatttggaggaggaactgagaccttgtccgccttgctggtac
aagtgttcagacatattcctgaaatggaactgctgtgtgccctgggtgactttcaagaag
tggatgtacttcatagtgatggacccattcgtggacttgggtatcaccatctgcattgtg
ctcaacaccatgttcatggccatggagcactaccccatgacaccagagtttgaagaagtg
ctgagtgtggggaacttggtcttcacaggaatcttcacagcagagatggtgctgaagctc
ttcgccatggatccgtactactacttccaggtcgggtggaacatcttcgacagcatcatt
gtgacaatgagcctggtggagctggggctggccaacgtcgagggtctgtccgtgctccgt
tccttccgtctgatgcgtgttttcaagctggccaaatcctggcccacactcaacatgcta
atcaagatcatcggtaattcagtgggcgcactgggtaacctcaccctggtcctggccatc
atcgtcttcatcttcgccgtggtgggcatgcagctcttcggcaagagctacaaagagtgt
gtctgcaagatctccttggactgcgagctgccccgctggcacatgcatgacttcttccac
gcttttctcatcatcttccgggtgctgtgcggagagtggatcgagaccatgtgggagtgc
atggaggtggccggacagggcatgtgtctcgtcgtcttcatgatggtcatggtcatcggt
aacctagtggtgttgaacctcttcttggccttgctgctgagctcgttcagcggtgacaac
ctggcggctccagaggaggacggggagatgaacaacctgcagatcgccaccagcaggatc
accaggggcatcgactgggccaaggcctacatcatcgagcaggtctggatcatcatcggg
aagcagcctaaggaggatggagacggggctgacggtaatgggggtagtaacggggatgtg
gacggcctcccaaaggacagcttggctttgaaaaatgtaaactccagtgacaacccaaag
gctgatttagagcttaaaatgctggacgtttggatagacgacgttaacccaagtggattt
cttacaaatgacaatttgaccctggatgtgcctattgccaaaatggagtcggatgatgat
gaggatgactgctctgaagaggaagaaggtgaaggcgcaaatggaaacgctaaagaggat
actgagttaaagaaacctattgcaccggacaatgcctcttcaatatgcagcacagtggac
aatccccctgaagtggaggaagaggaggaagaagaggcagaccccaccagccctgagaac
tgctggaccgagaaatgcattgggcgatgcccttgccttgattttgacatcaccacgggc
aaagggaagacttggtggaacttcaggaaggcatgcttcctcattgtggagcacaactac
ttcgagaccttcatcatcttcatgatcctgatgagtagtggagctttggcttttgaagac
atatacattgaacagcgcaggaccataaaaattatcctggaatatgccgatcaagtcttc
acctacgtgttcattattgagatgctcctgaagtgggtggcttacggattccaggcctac
ttcacaaacgcatggtgctggctggacttcctcattgtggatgtgtctttgattagctta
acggctaacatcctgggctatgctgaacttggaccaatcaaatctcttcgaactttaagg
gctttgcggcccctccgcgccctgtccagatttgagggaatgagggtggtggtgaacgct
ctggtgggggccattccttccatcttcaacgtgcttctagtgtgcctcatcttctggctc
atcttcagcatcatgggagtcaacctgtttgctgggaagtactactactgcttcaacacc
acgtctgaggagaggttctctgctgacgttgtgaacaacaagaccgaatgcttccaacta
atggagggtaatgacgatgtgcgctggatgaacgcaaaggtcaactatgacaacgtggcc
atgggctacctctccctcctgcaaatagcaacgtttaaaggatggatggatataatgtat
ggcgctgtggattcacgttttgtggaagaccagcccatatatgaggataatgtttacatg
tacatctactttgtcatattcatcatctttgggtccttcttcaccctgaatctcttcatc
ggtgtcattatcgacaacttcaaccaacagaaaaagaagtttggagggaaagacattttc
atgacagaggaacagaagaaatactacaatgccatgaaaaagcttggttccaagaagcca
cagaaacccattcccagaccccagaacaaattcgcaggccttattttcgacctgatcacc
caacaattcttcgacatcttcatcatggtgctgatctgcctcaacatggtaacgatgatg
gtggagacggacggccagagcaaggagaaggaggatatactcttcctcatcaacctggtg
tttatcatcgtcttcaccacagagtgtatcctcaagttgatcggactgcggcaatatttt
ttttccgtcggatggaatatttttgattttgtcgtagtcattctctccatcgttggttta
ctgctggcggacctcatagagaagtattttgtctcacctacccttttccgtgtcataaga
ctggccaggattggtcgagttctgagactcatccgaggagctaaaggcatccggacactg
ttgtttgccctgatgatgtcacttcctgctctcttcaacattggcctcctgctcttcctc
atcatgtttatcttctccattttcggaatgtccaactttgcgtatgtcaagaaggaggcc
ggaatagacgatatgttcaattttgaaacttttggcaacagtataatttgtctgttcatg
atcacaacctcagccggttgggatggtctcctctcacccattctgaatagtagacctccg
gactgtgacccggacgtggaaaatcccggcacagatgtaagaggcaactgcggcagccct
ggtttgggaatttgttttttctgcagctacatcatcatgtgtttccttgttgtggtcaac
atgtacattgccattattctcgagaacttcaatgtggccacagaggagagtggcgacccg
ctgtgtgaggaagacttcgagatgttctacgagacctgggagaagttcgaccctgacgcg
tcacaattcatcgcctatgacattttgtcggagttctgtgacacgcttaaagacccgctc
aggatccccaaacccaacgcaatcaagctgatcaccatggaccttcccattgtccctggg
gataagatccactgtctggacatcctgctggcgctgaccacagaggtgctgggagagtca
gtggagatggatgccatgaaagaaagcatggaggagaagttcatggccaacaacccctct
aaagtgtcatacgagccaatcaccaccaccctgaggcgaaagcaggaggaggtagcagct
gttgttattcagagagcctatcgtaagcatctgctgagacgttcgatgaaactcgcttcc
tacaagtaccgcgagaagaaagcgttaaccaaggaggacgaagcgccgccagagacggag
ggaatgattgccatcaggatgaacaaactgtatggaagccaacaatccctcggagtggat
gacaccgttgtagatatggattctcatgaaaaacgggagagcaacgaactgacagagaca
caacctcctgtggagaccgctgaagagccgccgcctgtggagcttcagaacgagatcctc
ttgcactctgccccctttgtcatccctgtctcaatccgtaactcacagctgaaagagtcc
gatgtttga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (13)   

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