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KEGG   Silurus meridionalis (southern catfish): 124400064
Entry
124400064         CDS       T08004                                 
Symbol
cacna1db
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1D isoform X1
  KO
K04851  voltage-dependent calcium channel L type alpha-1D
Organism
smeo  Silurus meridionalis (southern catfish)
Pathway
smeo04010  MAPK signaling pathway
smeo04020  Calcium signaling pathway
smeo04218  Cellular senescence
smeo04260  Cardiac muscle contraction
smeo04261  Adrenergic signaling in cardiomyocytes
smeo04270  Vascular smooth muscle contraction
smeo04530  Tight junction
smeo04912  GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:smeo04040]
    124400064 (cacna1db)
Ion channels [BR:smeo04040]
 Voltage-gated cation channels
  Calcium channel, voltage-gated (Cav)
   124400064 (cacna1db)
SSDB
Motif
Pfam: Ion_trans CAC1F_C Ca_chan_IQ GPHH PKD_channel PFF1_TM
Other DBs
NCBI-GeneID: 124400064
NCBI-ProteinID: XP_046727525
Position
17:8331746..8448603
AA seq 2223 aa
MELGKGDDRERMLLLGLASSPNHELQDLRRKGKVVFQKTLGRCLNTTDRGASYAISTRAP
SSGDAPPLWSESPSLSRQSLPQSGALSWQAAITAARNARADGTQTITTSDSAPVGSLSQR
KRQQYAKSKKQGSATNSRPPRALFCLTLNNPIRRACISLVEWKPFDIFILLSIFANCVAL
AVYIPFPEDDSNSTNHDLETVEYAFLIIFTIETFLKIIAYGLVMHQNSYVRNGWNMLDFI
IVIVGLFSVVLELMTKEGDSGQSGGKPGGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSI
IKAMVPLLHIALLVLFVIIIYAIIGLELFIGKMHATCYMNGTRTLAEEDPSPCALSGHGR
KCTVNGSTCRDGWQGPNNGITNFDNFLFAMLTVFQCITMEGWTEVLYWMNDAMGFELPWV
YFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQLEEDLKGYLDWITQ
AEDIDPENEEDGDQEGKRNRVTMADLTQEKKAGKSGWFSQSTETQASMPTSETESVNTDS
PNGDVDKICCCGPVCQKITKSKFRSVNNRSWRRWNRFCRRKCRAAVKSTTFYWLVIVLVF
LNTLTISSEHYNQPVWLTEVQDVANKVLLAMFTCEMLIKMYSLGLQAYFVSLFNRFDCFV
VCGGIVETILVELEIMPPLGISVFRCVRLLRIFKVTRHWASLSNLVASLLNSMKSIASLL
LLLFLFIIIFSLLGMQLFGGKFNFDETMLKRSTFDNFPQALLTVFQILTGEDWNTVMYNG
IMAYGGPSSSGMMVCIYFIILFICGNYILLNVFLAIAVDNLADAESLNSAQKEEEEENKR
KKRARKSSMQRKEDDKEGEDGGTKVALEEDTGDEEREAVNSTEVDDDPDVPSEPRPQRLS
DFSLKEKVQPIPEGTAFFIFSHTNPFRMGCYRLINHQIFTNITLVFIMLSSFSLAAEDPI
RSTSSRNIILGYFDYAFTAIFTVEILLKVLGYADYVFTSIFTFEIILKMTAYGAFLHKGA
FCRNYFNLLDLLVVGVSLVSFGIQSSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVF
VAIRTIGNIMIVTTLLQFMFACIGVQLFKGKFYRCTDDAKSSEAECKGTFILYSIGDNAL
PQVRERKWLNSDFNFDNVLHAMMALFTVSTFEGWPDLLYKAIDSNRENMGPIYNYRIEIS
IFFIIYIIIIAFFMMNIFVGFVIVTFQEQGEKEYKNCELDKNQRQCVEYALKARPLRRYI
PKNHYQYKFWYVVNSTGFEYVMFILIILNTLCLAVQHHGQSHRFNYAMDILNMMFTGVFT
VEMILKLIAFKPRHYFTDAWNTFDALIVVGSVVDIAITEINQTEAPVVAVERGNTEDSGR
ISITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYVALLIAMLFFIYAVIGMQVF
GKIALMDGSHINRNNNFQTFPQAVLLLFRCATGEAWQEIMLACLPLKQCHSDSEITPGEE
KSCGSGFAIIYFISFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWSEY
DPEAKGRIKHLDVVTLLRRIQPPLGFGKLCPHRVACKRLVAMNMPLNSDGTVMFNATLFA
LVRTALKIKTEGNLEQANEELRSVIKKIWKRTSSKLLDQVVPPAGDDEVTVGKFYATFLI
QDYFRKFKKRKELGLVGRNPSSHNTAIALQAGLRTLHDIGPEIRRAISCDLQDEDLVDFN
PDEEEDIYRRNGGLFGNHVNHVNGDHRGSSTSTNVTQRPLHVPPLPFYVHVEPPPQPLYS
QNRPYSNPNLYFKSPKSSNSNLNNANVPCMPVLTNGGQYRPHTDRPTRSRVSSLGSYLNL
RSDLESQRKSHFKRPRYYETYIRSDSTAGFYPTICRQASVHGDVIDDDRASVEYYSGEEF
QEEDLMLAGDRRSYREYQDTVSSLESNPPHENQDPECFYDDDEQPICQEPKKSQMRRLLP
STPQVPRRPSFNFECLCRQRSQDEAPHSPSVHQHTALPLQLMQHQVMAVAGLDSSRARLS
PTRSIHSWSTPPDTPPSYTPLIQVDWHGAPPSASSTPALARRSSWYTQKGHDWSPKSVTP
TSSLLQIPPAYSSQYLQQRGSAHSLVEAVLISEGLGKYAKDPNFVAAAKHEIADACEMTI
DEMESAASNLLNGSLGNSMGSDGTGTPQSIIGHSLHNYSDEEAEPNSKYEEDLADEIICI
SNL
NT seq 6672 nt   +upstreamnt  +downstreamnt
atggagctcggcaaaggtgacgaccgcgagaggatgcttctgctcggtttggcctcgagc
cccaatcacgagcttcaagacctccgacgcaaagggaaggtcgtcttccagaagacgctt
ggacgatgtttaaacactactgacagaggggcaagctatgctatcagcacacgggcccct
tcctctggcgacgcacctccgctttggtcagaaagcccctccctctccagacagtccctc
ccccagtccggcgctctgtcctggcaagctgcgattactgcggcgagaaacgccagagcc
gacggcacccagaccataactacatcggacagtgctccggtcggctcgctgtcgcagcgg
aagaggcagcagtatgccaagagcaagaagcagggtagcgccaccaatagcaggcctcca
cgggcactcttctgcctcaccctcaacaacccgatacgcagggcctgcatcagcctggtg
gagtggaaaccctttgatatctttatattgttgtctatttttgccaactgcgtggcctta
gctgtttacatccccttccctgaagatgattccaactcgactaatcatgacctggagaca
gtagaatatgccttcctgatcatttttactatcgagacctttctgaagatcatagcctac
ggactcgtaatgcaccagaactcctacgtaagaaacggctggaacatgctggatttcata
atagtcatagtggggctgttcagcgtggtcctggagctgatgaccaaagagggagattca
ggtcagtccggaggaaagccgggtggctttgatgtcaaagctctgcgagcgttccgcgtt
ctccgaccgctccgacttgtctcaggagtgcccagtttacaggttgtgctgaactccatt
attaaagccatggttcctctgctgcacatcgctctgctcgtgctcttcgttatcattatc
tacgccatcattggtctggagcttttcatcgggaagatgcacgctacctgttacatgaat
ggcacacgtacgttagcagaggaagaccccagcccttgtgcactatcgggtcatggacgc
aaatgtacagttaatggcagcacgtgtagagacggttggcaggggcccaacaacggcatc
accaactttgacaacttcctgtttgcaatgctgactgtgttccagtgcatcaccatggag
ggctggacggaagtgctgtattggatgaacgatgccatgggttttgagctgccatgggtc
tacttcgtcagtctggtcatctttggttccttcttcgtccttaatctcgttttgggtgtt
ctcagtggagagttctctaaggagcgtgagaaagctaaggcacgcggagacttccagaag
ctgcgagagaagcagcagctggaggaggacttaaaaggctatctggactggatcactcag
gccgaagatatcgacccggagaacgaagaggatggagaccaagaggggaaacgcaaccgg
gtgacgatggccgatctcacccaggagaagaaggcaggaaagtcgggctggttcagtcag
tccacagagactcaggcgagtatgccaaccagcgagactgagtctgttaacacagacagt
ccaaatggagacgttgataagatctgctgttgtggaccagtctgtcaaaaaattactaag
tcaaagttcaggtcagtaaacaaccgtagctggcggcgctggaatagattttgtcgcagg
aaatgcagagcagcggtgaaatcgaccacgttctactggctggtcattgtcctggtgttt
ctcaacactctcaccatatcctctgaacactacaaccaaccagtctggcttactgaagta
caagatgtcgccaacaaagttttgctggccatgttcacttgtgagatgctgattaagatg
tacagcctgggtctacaggcgtacttcgtgtctctgttcaaccgatttgactgtttcgtg
gtgtgcggaggcattgtggagaccattctcgtagagctggagatcatgccacctctcggc
atctccgtgttccgttgtgtccgtctactccggatctttaaagtcacccgtcactgggca
tctctgagcaacttagttgcctctctgctgaactccatgaagtccatcgcctcgttgtta
ctgctgctcttcctcttcatcatcatcttcagcctgcttggcatgcagctgtttggtgga
aaattcaactttgacgaaacaatgctcaaacggagcacctttgacaacttccctcaggcc
ttgctcactgtctttcagatcctgacaggtgaggactggaacacagtgatgtataatggg
atcatggcatatggaggcccttcttcttcaggcatgatggtgtgcatctatttcatcatt
cttttcatctgcggaaactacatcctgcttaacgtctttttggccattgctgtggacaac
ctggctgatgcggagagcctgaactcagcacaaaaagaggaagaggaagagaacaagagg
aagaagagagccaggaaaagtagcatgcagagaaaggaagatgataaagagggtgaagat
ggaggaactaaggttgcattagaagaggacacaggagatgaagaacgagaggctgttaat
tctacagaggtggatgatgacccagatgtgccatcagaaccccgtccccagaggctgtca
gactttagcctcaaagagaaggtccagccaattcctgagggaaccgctttcttcattttt
agccacactaatccattccgtatgggctgctatcgcctgatcaaccaccagatcttcacc
aacattaccctcgtcttcatcatgctcagctccttctcgctggcagccgaggaccccatt
cggagcacctcatcacggaacatcattcttggttattttgactatgccttcacagctatc
tttacagtagagatcctactgaaggtcctaggctatgccgattatgtcttcactagtata
tttacctttgagatcatattaaagatgacggcctatggtgcgttcttgcacaaaggagca
ttctgcagaaactacttcaacctgctggacttgctagttgttggagtctctttggtgtcg
tttggcatacagtcctcagccatctctgttgtaaagattctaagagtattgcgagtgctt
cgtcctcttcgagccatcaacagggccaaaggactgaaacacgtggtgcagtgtgtgttt
gtggccatcagaaccatcggcaacatcatgatcgtcaccactctgctgcagttcatgttc
gcctgtattggggtgcagctctttaaggggaagttttaccgctgtacagacgacgccaaa
tccagtgaagcagaatgcaaggggacattcatactgtacagtattggtgataatgcactg
ccacaagtgcgggagagaaagtggttaaacagtgacttcaactttgacaatgttctgcat
gctatgatggctctctttactgtgtcgacctttgagggctggccagacctcctatacaaa
gctatagactcaaaccgagaaaacatggggcccatttacaactaccgcatcgagatctcg
atcttcttcatcatctacatcatcatcatcgccttctttatgatgaacatctttgtgggt
tttgtcatcgtcaccttccaggagcagggagagaaagagtacaaaaactgtgaactggac
aagaatcagcgtcagtgtgtggagtatgctttgaaagctcgtccgttgcgcagatatatt
ccaaagaaccactaccagtataagttctggtacgtggtaaattccactggttttgaatat
gtcatgttcattctcatcatcctcaacacactctgcctggccgtacagcatcatggccag
tctcaccgctttaattatgccatggacatcctcaacatgatgttcacaggagtatttaca
gtggaaatgattctcaaactcatcgccttcaaacctaggcactattttaccgatgcatgg
aacacgtttgatgccttaattgttgttggtagcgtcgttgacattgcaatcacagagatc
aatcagaccgaagctcctgtagtggcagtggagcgagggaacactgaggatagcggacga
atttccatcacattctttcgtctgtttcgagtcatgcgtttggtcaagctgctgagcaga
ggagagggcattcggacactactatggactttcatcaagtcatttcaggctctgccgtat
gtcgctttgctgatagccatgctcttcttcatctacgcagtaatcgggatgcaggtgttc
gggaagattgccttgatggatggctcgcacattaatcgcaacaacaacttccagactttt
ccacaagctgtcctcctgctgtttaggtgtgctacaggagaggcttggcaggaaattatg
ctggcatgtttgcctcttaaacagtgtcactctgattctgaaatcacgcctggagaggag
aaatcatgtggcagtggttttgcaatcatttacttcatcagcttctatatgctctgtgct
tttttgatcatcaatttgtttgtggccgtcatcatggacaatttcgactacctgacacgc
gactggtcaatcctcggcccacatcacttggatgaattcaagaggatttggtctgaatat
gacccagaggccaaaggcaggattaaacacttggatgttgtgacattattgcgaaggatt
cagccaccactgggattcggtaaactttgcccacatagggtggcatgtaagaggctggtt
gccatgaacatgcctctaaacagcgacggtactgtcatgtttaatgccaccctttttgct
ctggtcagaacagctctgaagatcaaaactgaaggaaatttggaacaagccaatgaggaa
ctgaggtctgtcatcaagaagatctggaagagaactagttcaaaactcctggatcaagtg
gtcccacctgcaggagatgatgaagtaacagtggggaagttctatgccacattcctgata
caggactactttaggaaattcaagaaacgcaaagagctaggccttgtgggccggaaccct
tccagtcataacaccgccattgcgctacaggctggtctgcggacactgcatgatataggc
cctgagattcgcagagccatatcctgtgacctacaagatgaagacctggtagactttaac
ccagatgaagaagaagatatctatcggagaaatggtggcctttttggaaaccacgtcaat
catgtcaacggggatcacagaggctcatccacgtccactaacgtcacccagcgccccctc
cacgtcccaccccttcccttctatgttcatgttgagcctcctccacagcccctttactcg
caaaaccgcccatattcaaaccctaacttgtactttaagtcccctaagtcctcaaactcc
aacctcaacaatgccaatgtgccatgcatgcctgtcctgaccaacggagggcagtaccgc
cctcatacagatcggcccaccagaagccgggtgtcttccctgggttcctacctcaacctc
aggagtgatttagaatcacagcgaaagtctcattttaagagaccacgatactatgagacc
tatattaggtcagactcaacagctggtttttaccccaccatctgccgccaagcctctgtc
cacggtgatgtaattgacgatgatagagcttcagtggagtattacagtggggaggagttt
caggaggaggacctcatgctggctggtgacaggaggtcatacagagagtatcaggacacg
gtgagcagtttggagtcaaaccctcctcatgagaaccaagaccctgagtgtttttatgat
gatgatgagcagcccatttgccaggaacctaagaaatcgcagatgagaaggcttctgccc
tcgacacctcaggttcctcgtagaccttccttcaactttgagtgtctgtgcagacaaaga
agccaggatgaggctcctcattctccatcagttcatcagcacactgcactacctctgcaa
ctaatgcagcatcaggtgatggctgtagccggtctagactccagccgagcacgactctct
cctacacgctcgatccactcatggtccacgcccccggacacgcccccatcctacacccct
ctcatccaggtggactggcatggagctccacccagtgccagcagcactccagcattggct
cgccgcagctcctggtacacccagaagggccatgattggtcacccaaatcggtcacaccc
acttcctccctcttacagatcccacctgcctacagcagtcagtatctgcagcagagaggc
agcgctcatagtctggtggaggcagtgttgatatcggagggactgggaaaatatgcaaag
gacccaaattttgtggcagcagccaaacacgagatcgcagacgcatgcgagatgactatt
gatgaaatggaaagcgcagcaagcaacttgctaaatggaagtctgggcaatagcatggga
tcagacggcaccggcacgccccagagcatcataggccacagtctccacaactacagcgat
gaggaggcggagccaaacagtaaatacgaagaggacctcgcagacgaaattatatgcatc
tcaaatttatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (8)   
   KEGG PATHWAY (8)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (34)   
   RefSeq(pep) (34)   
DNA sequence (34)   
   RefSeq(nuc) (34)   
Protein domain (6)   
   Pfam (6)   
All databases (88)   

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