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KEGG   Scophthalmus maximus (turbot): 118316309
Entry
118316309         CDS       T09850                                 
Symbol
cacna1db
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1D
  KO
K04851  voltage-dependent calcium channel L type alpha-1D
Organism
smau  Scophthalmus maximus (turbot)
Pathway
smau04010  MAPK signaling pathway
smau04020  Calcium signaling pathway
smau04218  Cellular senescence
smau04260  Cardiac muscle contraction
smau04261  Adrenergic signaling in cardiomyocytes
smau04270  Vascular smooth muscle contraction
smau04530  Tight junction
smau04912  GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:smau00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:smau04040]
    118316309 (cacna1db)
Ion channels [BR:smau04040]
 Voltage-gated cation channels
  Calcium channel, voltage-gated (Cav)
   118316309 (cacna1db)
SSDB
Motif
Pfam: Ion_trans CAC1F_C Ca_chan_IQ GPHH PKD_channel EFTUD2 PFF1_TM
Other DBs
NCBI-GeneID: 118316309
NCBI-ProteinID: XP_047187044
Position
3:complement(16227305..16292019)
AA seq 2256 aa
MPFIIRGRPLRGAQYADNRRTTPSTDASALWSESNTRLYQLNPAVQLQAPASTGKPVGSS
HGLLGPNSGIQVSCGTSSGVNSVLAWHAAISAARQAQGDAAKPDAGSQPAVCTTGPPPVG
SLAQRKRQQYAKSKKQGGSTNSRPPRALFCLTLNNPIRRACISLVEWKPFDIFILLSIFA
NCVALAIYIPFPGDDSNSTNQELETVEYAFLIIFTIETFLKIIAYGLVMHQNSYVRNGWN
MLDFVIVIVGLFSVVLEMITKDADSGGQSGGKPGGFDVKALRAFRVLRPLRLVSGVPSLQ
VVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFIGKMHATCYVIQSGALAEEESTPCA
VSGHGRHCLLNGSICREGWQGPNNGITNFDNFLFAMLTVFQCITMEGWTDVLYWMNDAMG
FELPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQLEEDLKGY
LDWITQAEDIDPENEEEGDEEGKRNRVTLADLTEKKKGKFGWFTQSTETQASMPTSETES
ANTENHTGEEDKSPCCGPLCQKITKSKCSRQWRRWNRFCRRKCRAAVKSVTFYWLVIILV
FLNTLTIASEHYNQPDWLTEVQDVANKVLLAMFTMEMLVKMYSLGLQAYFVSLFNRFDCF
VVCGGIIETILVELAIMSPLGISVFRCVRLLRIFKVTRHWASLSNLVASLLNSMKSIASL
LLLLFLFIIIFSLLGMQLFGGKFNFDETVTKRSTFDNFPQALLTVFQILTGEDWNTVMYD
GIMAYGGPASSGMVVCIYFIILFICGNYILLNVFLAIAVDNLADAESLNTAQKEEEEAKK
RKNSAKDTSTDKKRVEITEAHDGETKAQLDLDLQMPADVMLEEDKDLYPAIDSPVCGEDD
DNAELPEVPPGPRPQRLSELSIKEKTLPIPKGSAFFIFSSTNPFRVVCHKLINHQIFTNL
ILVFIMLSSVSLAAEDPIRNFSARNIILGYADYVFTSMFTFEILIKMTAFGAFLHKGAFC
RNYFNLLDLLVVGVSLVSFGIQSSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVA
IRTIGNIMIVTTLLQFMFACIGVQLFKGKFYRCTDDAKSSPEECKGTYILYNNGETALPM
VRERIWYNSDFNFDNVLMAMMALFTVSTFEGWPTLLYKAIDSNKENMGPIYNYRIEISIF
FIIYIIIIAFFMMNIFVGFVIVTFQEQGEKEYKNCELDKNQRQCVEYALKARPLRRYIPK
NPYQYKFWYVVNSTGFEYVMFVLIILNTLCLAIQHHGQSHLFNYAMDVLNMVFTGVFTVE
MILKLIAFKPRGYVGDAWNVFDALVVIGSVVDIILSQSAAIPVVKVIVEPGNTEDSARIS
ITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYVALLIAMLFFIYAVIGMQVFGK
IAMVDGTQINRNNNFQTFPQAVLMLFRCATGEAWQDIMLACLPGKLCDSESDYNPGEERT
CGSGFAIIYFISFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWSEYDP
EAKGRIKHLDVVTLLRRIQPPLGFGKLCPHRVACKRLVAMNMPLNSDGTVMFNATLFALV
RTALKIKTEGNLDQANEELRAVIKKIWKRTSMKLLDQVVPPAGDDEVTVGKFYATFLIQD
YFRKFKRRKEQGLVGRRSWERLNTTMALQAGLRTLHDIGPEIRRAISCDLQEEGLVDANG
DEAEEIYRRNGGLFGNHVNHVCGDQGGSSHPTTTTQRPLQILTLSCSSSTEPAQTGSRAS
GNDREAETEMNSSPIQYNHHYHPPHANKSPHCNSPGNQSPIPSNANLNNANVPSLLSMTS
GRQQKCLLRRDRPSSAKNGSSACTYGKGAHAGQAKAHKLVKSHSTRTRYYEAYIRSESGG
GLYPTIRREVPGGGDSDEERGSGEYYSGEEFREDDIMITRDRLSNKELDAEGDFDLEVST
GNHLPDDDDQQLIYQESRRSPLRWFLPSPQASNRPTFSFECLRRRSSQDEAPPSPSCTAL
PLHLVQQQVMAVAGLDASRIHRLSPTRSLRSWATPPASPISLDRSPGYTPLIQVDWRSPG
SVCSIPGAVKRSSWYTDGQDGPPSRSHSPSRLHLPAECCSHFLQKRGSATSLVEAVLISE
GLGKYAKDPKFVSATKHEIADACEMTIDEMESAASNLLNGSKGSDTNGGTENVSPDTQAT
AHLRDRSIRDYSDEEPYVAGKCDEDLTDEMICITSL
NT seq 6771 nt   +upstreamnt  +downstreamnt
atgccgttcattataaggggaagacccctgaggggggcacagtatgccgacaacagaagg
accactccctccactgatgcctcggcgctctggtcagaaagcaacacacgcctgtatcag
ctcaatccagcagtgcaactgcaggctccggccagcactggcaagccagttggctcctct
catggcctccttgggcccaatagcggcattcaggtttcctgtggcactagctccggtgtc
aactcggtcctcgcttggcatgctgccattagcgccgctcggcaagcacagggtgatgct
gctaaaccggacgcaggttcacagcccgcggtttgcaccactggaccgcctcctgtaggc
tcactggcgcagaggaagaggcagcagtacgccaaaagcaaaaaacaaggaggatctacc
aacagcaggccaccccgagctctgttctgcctcaccctcaacaacccgatccgcagggcc
tgcatcagtctggtagagtggaaaccatttgatatctttatactgctgtctatttttgcc
aactgtgtggccttagccatctacatccccttccctggagacgactccaattctaccaac
caagaactggaaacagtagaatatgccttcctcatcattttcactatagaaacatttctg
aagattattgcctacggcctggtcatgcaccaaaactcctacgtcagaaacggttggaac
atgctggactttgtcattgtcattgtggggttgttcagtgttgttctggagatgataacc
aaagacgctgactctggtggacagtctggaggcaaacctggggggtttgacgtcaaggcc
ctccgagcctttcgcgtgctacgacccctccgcctcgtttctggagttcccagtttacag
gtggttttaaactccattatcaaagccatggttcccctgcttcacattgctctgctcgtt
ctcttcgttattatcatctacgccatcatcggcctggaactcttcattggcaaaatgcat
gccacatgctatgtgatacaatcaggtgccctcgctgaagaagagtccacgccgtgcgcg
gtatcagggcatggccgtcactgcctgctcaatggttcaatctgcagggagggctggcaa
ggccccaacaacggcatcaccaactttgacaattttttgtttgccatgctcactgtgttc
cagtgcatcaccatggagggatggactgacgtgctctactggatgaatgatgcaatgggc
tttgagctgccttgggtctactttgtcagtctggtcatctttggatccttctttgtactc
aacttggtcttgggagtgttgagcggagagttttccaaagaacgagagaaggccaaggct
cggggagacttccaaaagctacgtgagaagcagcagttggaggaagacctgaagggctac
ctggactggatcacccaggccgaggacatcgaccccgagaacgaagaggaaggagacgag
gagggcaagcgtaaccgggtcacgctggctgacctcactgagaagaagaagggaaagttt
ggctggttcactcagtccacagagacacaggcgagcatgcccactagtgagacagagtcg
gcgaacacagagaatcacacgggagaggaggacaaatctccctgctgcggaccgctgtgt
caaaaaattactaagtcaaagtgcagtcgtcagtggcggcgatggaaccggttttgccgc
agaaagtgtcgtgcagcggtgaaatcagtgacgttttattggctggtcatcatcttggtg
ttcctcaacactctcaccatcgcctctgagcactacaatcagccagactggctgactgaa
gtacaggacgtggccaacaaagttctcctggcaatgttcaccatggagatgctggtgaag
atgtacagtttggggctgcaggcctactttgtgtccctgttcaaccgctttgactgtttc
gtggtgtgcggaggcatcatagagaccatcctggtggagctggccatcatgtctcctttg
ggcatctctgttttccgctgtgtacgtctccttaggatcttcaaagttacacgtcattgg
gcctctctcagtaacctggtcgcctctctgctcaactccatgaagtctatcgcctccctg
ttgctgctgctcttcctcttcatcatcatcttctccctgcttggcatgcagctctttggg
ggcaagttcaacttcgacgagaccgtgaccaagaggagcacgtttgataacttcccccag
gctctgctcactgtgttccagatcttgacaggagaagactggaatacggtgatgtatgat
ggtatcatggcatacggtggtccggcctcctctggaatggtggtctgcatttacttcatc
atcctctttatctgtggaaattacatcctgctgaatgtcttcttggcaatcgccgttgac
aacctggcagatgcagagagcctcaacacagcacagaaggaggaagaggaggccaagaag
aggaagaacagtgccaaggatacaagcacagataagaagagagttgaaataacagaagcc
catgatggcgagaccaaggctcaactcgacctcgatctacagatgccggcagacgtcatg
ctggaggaagacaaagacttgtatcctgccattgattctccagtgtgtggtgaggatgat
gataatgcagaactcccagaggtgccccctggaccccgcccccagaggctatctgaactc
agcatcaaagaaaagaccctgcccatcccgaagggcagcgccttcttcatcttcagcagc
actaacccgtttcgtgtagtctgccataagctgatcaaccatcagatctttaccaacctc
atcctggtcttcatcatgctcagctctgtctctctggctgccgaggatcccattcgcaac
ttctctgctcgcaatattatcctaggctatgcagactatgtcttcactagtatgtttaca
tttgagatccttattaagatgacagcattcggagcgttccttcataaaggggcgttctgt
agaaactacttcaacctattagacctgctggtcgttggtgtgtctctggtgtcgttcggc
attcagtcgtctgccatctctgtggtgaagattctccgcgttctgagagtcctccgtcct
ctcagggccatcaacagagccaagggactcaagcatgtggtccagtgtgtgttcgtggcc
atcaggaccatcggcaacatcatgatcgtcaccaccctgctgcagttcatgttcgcttgt
atcggtgtgcagctctttaaggggaaattttatcgatgtacagatgacgccaagtccagc
ccggaggagtgcaagggaacatatattctctacaacaacggggagacagcactgcccatg
gtgagggagaggatctggtacaacagtgacttcaactttgacaacgtcctcatggccatg
atggctctcttcaccgtctccacctttgaaggatggcccaccctgctgtacaaggccatc
gactccaacaaagagaacatgggtcccatctacaactaccgcattgagatctccatcttc
ttcatcatctacatcatcatcatcgccttcttcatgatgaacatctttgttggtttcgtt
attgtcaccttccaggagcagggggagaaggagtacaagaactgcgagctggacaagaac
cagcgtcagtgtgtggaatatgctctgaaagctcgtcctctgcgacgctacatccccaaa
aacccctaccagtacaagttctggtacgtggtcaactccacgggttttgagtacgtcatg
tttgtcctaatcatcctcaacaccttgtgtctggccatacagcaccatggtcagtctcat
ctatttaactatgccatggacgtcctcaacatggtcttcaccggggttttcactgtggag
atgatcctcaagctcatcgccttcaagcccagaggctatgtcggggacgcctggaacgtc
ttcgatgccctggtggtcattggcagtgtagtcgacatcatactcagccagtcggcagcc
attcctgtggtcaaggtgatagtggagccagggaacacagaggacagcgctcgcatctcc
atcaccttcttccgcctgttcagagtgatgcgattggtgaaactgctgagcaggggggag
ggcatcaggactctgctgtggaccttcatcaagtctttccaggctcttccctatgtcgcc
ctcctgattgccatgttgttcttcatatatgctgtgataggaatgcaggtgtttgggaaa
atagcgatggtggatggaacacaaatcaaccgcaacaacaactttcaaaccttccctcaa
gctgtcctgatgctcttcaggtgtgctacaggtgaggcctggcaggacatcatgctggcc
tgtctgccggggaagctgtgtgattcagagtctgactacaaccccggagaggagagaacc
tgcggcagtggctttgccattatctacttcatcagcttctacatgctctgtgcttttctg
atcatcaatttatttgtagccgtcatcatggataactttgactatctgacccgcgattgg
tccattttggggccgcatcacctggatgagtttaaacggatctggtcagaatacgaccct
gaagccaagggccggataaagcatctggatgtggtgactctgctgaggagaatccagcct
ccgctgggcttcggcaagctctgccctcacagggtggcctgtaagcgtctggtggcgatg
aacatgcccctgaacagtgatgggacggtcatgtttaatgccactttgtttgcactggtc
cgcactgctctcaagattaagactgagggtaacctggatcaggccaatgaggagcttcga
gctgtgatcaagaagatctggaagaggacaagcatgaagctgctggaccaagtggtgccc
cctgcaggcgatgacgaggtaacagtggggaagttctatgccaccttcctgatacaggac
tacttcaggaagttcaagaggcgcaaagagcaaggtcttgtgggaaggcgctcgtgggag
aggctgaataccaccatggctctgcaagccggtctgcgcacgctacatgacattggacca
gagatccgtcgagccatatcatgtgacctgcaggaggaggggctagtagatgctaatgga
gacgaagcggaggaaatctacaggcgtaatggcggtttgtttgggaaccatgtaaaccat
gtctgtggcgatcagggaggctcctcccacccgaccaccaccacccaacgcccgctgcag
atcctcaccctctcctgcagctcctccacggaacccgcccagactggcagcagagccagc
ggcaatgacagggaggcagagacagagatgaactcctcacccatccagtataatcatcat
tatcacccccctcatgcgaataagtcccctcattgtaattcccctggcaatcaatcgcca
ataccctccaatgccaacctcaacaatgccaacgtgccctcgcttctctccatgaccagt
gggaggcagcagaagtgtttgttaaggcgagaccgcccgtcctccgccaaaaacggatca
tcagcgtgcacctacggcaaaggagcgcatgctggtcaagcaaaggcgcacaagctggtc
aagtcccactccaccaggacacgctactatgaggcctacattaggtcagagagcggtggt
ggactttaccccactattcgccgagaggtgccggggggcggggacagcgacgaggagcgg
ggctcaggagagtactacagtggagaggagttccgcgaggacgacatcatgatcacaagg
gacaggctgtccaacaaggaactagatgcagagggagacttcgacctcgaggtttctacg
ggcaaccacctgcctgatgacgatgatcaacagctgatctaccaagagagcaggcggtca
cctctgagatggttcttaccctcacctcaagcctccaacagaccaacatttagttttgag
tgtctccgcagaagaagtagtcaggacgaagctcctccctctccgtcctgcacggctctt
ccactacacctggtgcagcagcaggtaatggcggtggccggtcttgatgccagcagaatt
caccgtctgtctccgacgaggtcgctgcgctcctgggccacgcctcctgcttcacccatc
agcctcgaccgctcgcccggctacacgccgctcatacaggtggactggcgcagtcccggc
agcgtctgcagcatccccggtgcagtgaagaggagctcatggtacacagacggccaggac
ggccctcccagccgcagccactctccgtcacgtctgcacctgcccgcagagtgctgctca
cacttcctgcagaagagaggcagtgccaccagtctggtggaggctgtgttgatctctgag
ggtctgggcaaatacgccaaagaccccaagtttgtctccgcgaccaaacacgagattgca
gacgcctgcgagatgacaatcgacgagatggagagcgccgccagtaatctcctgaacggg
agtaagggcagtgacaccaatgggggaacggagaacgtcagcccggacacacaagccacc
gcgcatcttagagaccgcagcatacgtgactacagcgacgaggagccgtatgtggctggg
aaatgcgacgaggacttgacagatgagatgatatgcatcacgtcgctatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (8)   
   KEGG PATHWAY (8)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (23)   

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