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KEGG   Scophthalmus maximus (turbot): 118289218
Entry
118289218         CDS       T09850                                 
Symbol
scn4ab
Name
(RefSeq) sodium channel protein type 4 subunit alpha B isoform X1
  KO
K04837  voltage-gated sodium channel type IV alpha
Organism
smau  Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:smau00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:smau04040]
    118289218 (scn4ab)
Ion channels [BR:smau04040]
 Voltage-gated cation channels
  Sodium channel, voltage-gated (Nav)
   118289218 (scn4ab)
SSDB
Motif
Pfam: Ion_trans Na_trans_assoc PKD_channel IQ_SCN5A_C GPHH
Other DBs
NCBI-GeneID: 118289218
NCBI-ProteinID: XP_035471915
Position
17:complement(20729126..20757117)
AA seq 1761 aa
MAPLLPPVGAEVFRRFTSASLEEIQRRHEAEEKEHQKRKEKNIEIAEEDIPKPASDLEAG
KPLPFIYGEPPPELLNTPLEELDPFYQSQKTFIVLSKGNIIYRFNAESSCYMLSPFSRLR
TGAIRILIHFCFSLFIMVTILTNCVFMTMSDPPSWSKTVEYVFTGIYTFEATIKILSRGF
CVGDFTFLRDPWNWLDFMVISMAYLTEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVG
ALIQAVKKLADVMILTVFCLSVFALIGLQLFMGNLRQKCVLIPPLLSSHTSDTDLKSHYH
DNITLGNQTHGNGTGSSNFDFYEYINNPENHYYLSGHLDPLLCGNSSDAGVCPEGFFCLK
AGRNPNYGYTSYDSFGWAFLALFRLMTQDFWENLFQLTLRAAGKTYMIFFVVVIFLGSFY
LINLILAVVAMAYAEQNKASIAEAKQKEEEYEEILEALKRRGEEAACRAALSDKTNSIQG
DEEEHTAMEDMRPCPACWYTFADVFLKWNCCSCWQWLKKRLYTFVMDPFVDLGITICIVL
NTVFMAMEHYPMTDEFEELLSIGNLVFTGIFTAEMVLKLLAMDPYYYFQVGWNIFDSIIV
TMSLVELGLANVQGLSVLRSFRLMRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAII
VFIFAVVGMQLFGKNYKDCVCRIAEDCELPRWHMNDFFHAFLIIFRVLCGEWIETMWDCM
EVAGQTMCLIVFMMVMVIGNLVVLNLFLALLLSSFSGDNLAAPEDEGENNLQIAINRINR
AVAWTKSWILEHIWTMLGKNKHANRDHIVVDSDNDNMTKEVVPLTFVTSDQQRSEVNNLS
CSHGNMTSSYHNITFLRVPIAESESESDCDTPDSEDEEDDEENKNHSQCDESSVCSTVQK
PPAVHEDEDDEDHDSNTPEDCCTDKCYHHCPLLDIDMSQVRGKVWSNFRRTCFCIVEHNY
FETFIIFMILLSSGALAFEDIYMEQRRVIKMLLEFADQVFTYVFVIEMILKWIAYGFKTY
FTNAWCWLDFLIVDVSLVSLTANILGYSDLGAIKSLRTLRALRPLRALSRFEGMRVVVNA
LVGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKFYYCFNETSGQMFHPDEVNNKTECLAL
INENSDIRWKNLKVNYDNVGMGYLSLLQVATFKGWMDIMYAAVDSREVESQPMYEGNLYM
YLYFVCFIIFGSFFTLNLFIGVIIDNFNQQKSKLGGTDIFMTEEQKKYYNAMKKLGSKKP
QKPVPRPGNKFQGLVFDLVTTQFFDILIMVLICLNMVTMMVETDEQSQEKELLLYWVNLV
FIIIFTSECSLKIIALRQHYFAVGWNIFDFVVVILSIVGLLLADIIEKYFVSPTLFRVIR
LARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFAYVKKEA
MIDDMFNFENFGNSMICLFMITTSAGWDGLLSPIMNTAPDCDPDIENPGSMVRGNCGSPA
VGIIFFTTYIIMSFLVVVNMYIAIILENFNVATEESADPLCEDDFEMFYETWEKFDPNAS
QFIQYSKLSDFCDTLQDPLRIPKPNTIKLINMDLPLVPGDKIHCLDILLALTAQVLGDSG
AMDNLKSSMEEKFMANNPSKVSYEPISSTLRRKQEEVAAVVVQQAYRKHLLRRAVKLASF
KYREKTGGHREEDSLLERKGLIFKRISQLYGNGQEPGSGDSGEDPRPPARVELHSEVLLR
AAPPVIAPDLLQDENLRESTV
NT seq 5286 nt   +upstreamnt  +downstreamnt
atggctcctctactgccccctgttggtgctgaggtcttcagacgcttcacttcagcctca
ctagaagaaatccaacgtcgacatgaagctgaagaaaaggagcatcagaaaaggaaggag
aagaacattgagatagcagaggaagatattcctaaaccagcaagtgacctggaggctggc
aagcccctcccattcatctatggagaaccgcctcctgagctactcaacaccccgttggag
gagctagatcccttctaccaatcacaaaagactttcatcgttctcagtaaaggaaacatc
atctacaggttcaatgccgagtcgtcctgttacatgctgagtccgttcagtcgtctgaga
accggcgccatcaggatcctgatacacttttgtttcagtttattcatcatggtgacgatt
ctgacgaactgtgttttcatgactatgagtgatcctccgtcgtggagcaagactgtggaa
tacgtgtttactggcatttacacgtttgaagcaacaatcaaaattttgtcccgaggattc
tgtgtgggagatttcaccttccttagagacccctggaactggctcgacttcatggtcatc
agcatggcgtatctgacagagtttgtagatttgggaaatgtttcagccttgaggacgttc
agagttcttcgagccctgaagaccatcacggtcatccctggtctgaagacgattgtcgga
gctctcattcaggcagtgaagaagttggcggacgtcatgatcctgacggtgttctgcctc
agtgtattcgctctgattggtctgcagctcttcatgggaaacctgaggcaaaagtgtgtc
ctgattccaccgctgcttagcagccacacatctgatactgatctcaaatcccattaccat
gacaacatcacccttggaaaccaaacccatggcaatggaacaggaagcagtaactttgat
ttctatgagtacattaacaacccagagaaccattactacctgtctggtcacctggatcct
ctgctgtgtggaaacagttctgatgctggggtctgtccagagggtttcttctgtctgaaa
gcagggaggaatccaaactacggttacacaagctatgactcttttggttgggcgttcctg
gctctgttcagactgatgacccaggacttctgggaaaacctcttccagctaacgttgagg
gcagcaggtaaaacctatatgattttcttcgtggtcgtcattttcctgggctcgttctac
ctcatcaacctgatcctggcggtggttgccatggcgtacgctgagcagaacaaggcgtcc
attgccgaggccaaacagaaggaggaggagtacgaggagatcctggaggcgctgaagagg
agaggcgaggaggcggcctgcagggcagcgctctctgacaaaacaaattccatacagggt
gatgaggaagaacataccgccatggaagatatgaggccgtgtcctgcttgttggtacacc
ttcgctgacgtcttcctgaagtggaattgctgcagttgctggcaatggctcaaaaagcgt
ctctacaccttcgtaatggacccgtttgttgacctcggcatcaccatctgcatcgtcctc
aacactgtcttcatggccatggagcattatccaatgacggatgagtttgaggagctgttg
agcatcggaaacctggtcttcacagggatcttcacagcggagatggtcctcaaacttctg
gccatggacccttattactacttccaggtgggctggaacatctttgacagcatcattgtc
actatgagtctggtggagctgggattggccaatgttcagggtctgtcggtgctgcgctca
ttccgattgatgcgagtctttaagctggccaagtcgtggccgaccctcaacatgctgatc
aagatcattgggaactctgtcggggctctggggaacctgactctggttctggccatcatc
gtcttcatctttgctgtcgttgggatgcagctgtttgggaagaactacaaagactgtgtc
tgtcgaatcgcagaagactgcgagcttcctcgctggcatatgaatgacttctttcatgct
ttcctcatcatctttagggtcttgtgtggagagtggattgagaccatgtgggattgcatg
gaggtcgcaggtcagaccatgtgtctgattgtcttcatgatggtcatggtcatcggaaac
ctggtggtcctgaatctgttcctggccttgttgctcagctcattcagtggggataatctg
gcggctccagaagatgaaggtgaaaacaacttgcaaattgccataaatcggatcaacagg
gctgtagcttggaccaaatcctggattttagagcacatctggaccatgttgggaaagaat
aaacatgccaaccgagaccacattgtggttgacagtgacaacgacaatatgacaaaggag
gttgtaccattgacctttgtgacctcagaccagcaacgctcagaggtcaacaatctcagc
tgtagccatggcaacatgaccagcagttaccacaacatcaccttcctgagggtgcccata
gctgagtctgagtctgagtctgactgcgacacacctgacagtgaagatgaggaggatgac
gaggagaataaaaatcactctcaatgtgacgagtcgtcagtttgcagcactgtacagaaa
ccccctgcagtccatgaggatgaagatgatgaagatcatgattcaaacacacctgaggac
tgttgtaccgacaagtgttatcatcactgtccactcctagacatagacatgtcccaggtc
agaggcaaggtctggtctaacttcaggagaacatgtttctgcatcgtagaacacaactac
tttgagaccttcatcatcttcatgatcctgctgagcagtggagctctggcgttcgaggac
atctacatggagcagcgtcgggtcataaagatgcttctggagttcgcagaccaggttttc
acttacgtatttgtgatcgagatgattctcaagtggatcgcatacggattcaagacctac
ttcaccaacgcctggtgctggctggacttcctcatcgtagatgtgtctctggtgtctctg
acagccaacatcctgggatactctgacctgggagccattaagtctctgaggactctgagg
gctctgaggccgctgagggccctgtcccgcttcgaaggcatgagggtagttgtgaacgct
ctggttggagcgatcccgtctattttcaacgtgcttcttgtctgtttgatcttctggctc
atcttcagcatcatgggggtgaatctatttgcagggaagttttattactgtttcaatgag
acatcagggcagatgtttcaccctgacgaggtcaacaacaagacagagtgtctcgctctg
atcaacgaaaactctgacatccgctggaagaacctgaaggttaactacgacaatgtggga
atgggctacctgtctttgctgcaagtggccacgtttaaaggctggatggacatcatgtac
gcagcagtggactccagagaggtggagtcccagccgatgtacgagggtaacctgtacatg
tacctgtactttgtctgtttcattatctttggctccttcttcaccctcaacctcttcatc
ggagtcatcatcgacaacttcaaccagcagaaatccaagttgggaggaacagatattttc
atgacggaggagcagaagaaatattacaacgccatgaagaaactgggttcaaagaaacct
caaaaacctgttccacgccctgggaacaagttccagggtctggtctttgacctggttacc
acgcagtttttcgacatcctcatcatggtgctaatctgcctcaacatggtgaccatgatg
gtggagacggatgagcagagccaggagaaagaactcctcctgtactgggtcaaccttgtc
ttcatcatcatcttcacttccgagtgctctctgaagatcatcgcactcaggcagcactac
tttgctgtcggctggaacatttttgactttgtggtcgtcatcctatccatcgtaggcctc
ctcctcgctgacatcatagagaagtattttgtttcacccacgctctttcgtgtgattcgt
ttggctcgaattggtcgagtccttcgtctcatccgtggagctaaggggatccgcaccctg
ttgtttgccctgatgatgtcacttcctgccctcttcaatattggcctcctcctcttcctc
attatgttcatcttctccatcttcgggatgtcaaactttgcctacgtgaagaaggaagct
atgatcgatgacatgtttaactttgagaacttcggtaacagtatgatctgtttgtttatg
atcaccacgtcggctggatgggacggtctgctgagtcccatcatgaacacggcaccggac
tgtgacccagacattgagaaccccggatcaatggtgcgagggaactgtgggagcccagcg
gtgggcatcatcttcttcaccacttacatcatcatgtccttcttggtggtggttaacatg
tacattgccattatcctggagaacttcaatgtggccacagaggagagcgctgacccgctg
tgtgaggacgactttgagatgttttatgaaacctgggagaagtttgaccccaacgcctcg
cagtttattcagtacagtaagctgtcagacttctgcgatactctgcaggatcctctgagg
attcctaaaccaaacaccatcaaactgatcaacatggatctgcctctggttcctggagac
aagattcactgtctggatattctgctcgctctcactgcacaagtgctgggtgattcagga
gcaatggataatctcaaatccagcatggaggagaaattcatggccaacaacccgtccaag
gtgtcgtatgaaccaatcagcagcaccctacgaaggaaacaggaagaggtcgcagcggta
gtggtccagcaggcgtacaggaaacacctcctgcgacgggcggtcaaactggcgtccttc
aaataccgggagaagacagggggacatcgagaggaggattcactgctggagagaaaagga
ctcatctttaaacggatcagtcagctgtatggaaatggacaggagcctggttctggtgat
tcaggtgaggacccacgtcctcccgcccgggtggagcttcacagtgaggttctccttcgc
gctgctccaccagtcatcgcccctgacttattgcaagatgagaacctgagggagtctacc
gtgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (8)   
   RefSeq(nuc) (4)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (23)   

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