[go: up one dir, main page]
More Web Proxy on the site http://driver.im/
KEGG   Seriola lalandi dorsalis (Yellowtail amberjack): 111655951
Entry
111655951         CDS       T06058                                 
Symbol
rxra
Name
(RefSeq) retinoic acid receptor RXR-alpha
  KO
K08524  retinoid X receptor alpha
Organism
slal  Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03320  PPAR signaling pathway
slal04148  Efferocytosis
slal04920  Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:slal00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    111655951 (rxra)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:slal03000]
    111655951 (rxra)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:slal03310]
    111655951 (rxra)
Transcription factors [BR:slal03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    111655951 (rxra)
Nuclear receptors [BR:slal03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   111655951 (rxra)
SSDB
Motif
Pfam: Hormone_recep Nuc_recep-AF1 zf-C4 tRNA_bind_3
Other DBs
NCBI-GeneID: 111655951
NCBI-ProteinID: XP_023263292
Ensembl: ENSSLDG00000021267
Position
Unknown
AA seq 496 aa
METKPFLSLGFLKPQCSLAPPMQRGRSGEACSCFSGVCPLHQRRLSSDSSGQMTSSPLGS
PTSHRGMHPSLLSPTSMGPSGSLHSPISTLSSPMNGMASPFSVISSPMGPHSMNSPGMGY
GPSVSPQLNSPMNSVSSTEDIKPPLGLNGVMKVPAQPSGTALSLTKHICAICGDRSSGKH
YGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCVIDKRQRNRCQYCRYQKCLAMGMKREAVQ
EERQRAKDKNENEVESTSCANEDMPVEKILEAEQAVEPKTETYIETNLGVPSNSPNDPVT
NICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILL
ATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNP
GEVEALREKVYASLEAYCKQKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTP
IDTFLMEMLEAPHQMT
NT seq 1491 nt   +upstreamnt  +downstreamnt
atggaaaccaaaccattcttgtcattggggttcctgaagccccagtgctcgttggctcct
cccatgcagcggggtcgctcaggcgaggcatgttcctgtttcagtggcgtgtgtcccctc
catcagcgtcgcctatcctcagactcttcaggccagatgacctcctcgcccctgggctca
cccacatcccaccggggaatgcacccgtctcttctcagcccgacgtccatggggccctct
ggctctcttcactctcccatcagcacgctgagttcacccatgaacggcatggcctcacct
ttctccgtcatcagctcacccatgggccctcactccatgaactcgccaggcatgggctac
ggccccagcgtcagcccccagctgaactctccgatgaactcggtcagcagtacggaggac
attaagcccccgctgggcctcaacggtgtgatgaaggtgcccgcccagccctcaggcaca
gccctgtcgctcacaaaacacatctgcgccatctgtggtgaccgctcctcaggtaaacac
tatggggtatacagctgtgagggctgcaaaggttttttcaaaaggacggtgcgcaaagac
ctgacctacacctgtcgtgataacaaggactgtgtcatcgataaacgccagaggaaccgc
tgccagtactgtcgctaccagaagtgtttagccatgggcatgaagagagaagccgttcag
gaggagcgccagcgagccaaggacaaaaatgagaacgaggtggagtccaccagctgcgcc
aacgaggacatgcccgtggagaagatcctggaagccgagcaggcggtggaacccaaaacg
gagacctacattgagaccaaccttggtgtgccatcaaactcgcccaacgacccagtgaca
aatatctgtcaggcggctgacaaacaactcttcacactggtggagtgggccaagaggatc
ccccacttctctgagctgccgctggacgaccaggtcatccttctacgagcaggttggaat
gagctcctcattgcatcattttcgcaccgttcgatagcggttaaagacgggattctgttg
gcaaccgggctgcatgtacaccgcaacagcgctcatagtgccggagtgggagccatcttt
gacagagtgctcacagaactggtgtctaagatgagggacatgcagatggataagacagaa
ctggggtgccttcgagctatagtccttttcaacccagactcaaaaggtctgtccaaccca
ggtgaggtagaagccctaagagagaaagtctatgcgtctttagaggcctactgcaaacag
aaatacccagagcagcctggcaggtttgccaagctgttgctgcggttaccagcgctgcgc
tcgatcggcctgaagtgtctggagcacttgttcttctttaagctcatcggcgacacgccc
atcgacaccttcctcatggagatgctagaggctccacatcaaatgacataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system