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KEGG   Scomber japonicus (chub mackerel): 128359037
Entry
128359037         CDS       T09718                                 
Name
(RefSeq) sodium channel protein type 4 subunit alpha-like
  KO
K04837  voltage-gated sodium channel type IV alpha
Organism
sjo  Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:sjo04040]
    128359037
Ion channels [BR:sjo04040]
 Voltage-gated cation channels
  Sodium channel, voltage-gated (Nav)
   128359037
SSDB
Motif
Pfam: Ion_trans IQ_SCN5A_C Na_trans_assoc PKD_channel
Other DBs
NCBI-GeneID: 128359037
NCBI-ProteinID: XP_053175429
Position
5:complement(4761834..4789745)
AA seq 1295 aa
MGSLANKCSLDFRTFSNFTSYEDFLADQEYKYYRPGQLDALLCGNMSTAGVCPEGYMCLR
TRSNPNYGYTNFDTFFWSLLSALRMMTHDFWYNLAELTVRATGMTAIVYFAIVIFPASYY
LLSLFMGMVAMTTAEHSEASAAEAKRREEDFAEVLQALKKCEVEEVRSSHLTKDHRSRSP
CCSSFSGHFPKCGCWQWLQQRLYTFVTDPFFELGIVICLIVNIMFLSMEHYPMTETFEGV
LSRTDLFFVFIYTLEMILKLVAMGLSGYFKMSWNVFEFAIVCSSLSELILADIEGYAMMR
SFGLLRVIRLAKWWPAFNMLLRIMRNSMGALRNLTLLLVLMVFFFSVAGMQLFGQDYTRC
VCKISADCELPRWHMVDFYHSFLMVFRTMCGDWIETLWDCMEVSSHSVCMIFHITVLVFG
KLLILGLFMGLLLSNLAAPEEDKEGEEKNKLKIAMNRIKKAWTRVKPNNTDGTEPDTVTS
KGDGRKEYLALTSVTTEQPASKKVEEKKGDKNQDRHTLEDCCCDMCYQCCSFPETNTCRG
VLRIWSNLRRCCLSIVEHIYFKWFITLIVVLSSTTLVAEDIYLESRQILKAILKYADLVF
TIVFVVEMILKMVGYGLKRYFTKNWCWLDFSVVVVSLISLTVDMLELPAFTLKGLKTLRS
LRMVSRFRNTRVVMNALVCVLPSLFEVLLVGLTVWLFFGVIGVELFAGRFYHCINETSQD
YFPAEEVENKTECFFFSEEEIDVRWKNMPLNFDHLLAAYLSLLNLATGAWYDVMYAAVDS
RKVEDQPEYEANLYMYLFYVTFVISCFFFLNLFIRVLIDTINKLRHKICKNIFFTEGQKN
MYKIQKKKLNQTPIPPRPQNKCRAGVFSLVTSWYFEVFMVAVICINIVVLMFETNDDSEE
KEEVLHWIHFIIVVIFLIESILKIVAFGRDYFKDWLNIWDFVLVLLSILNIFFADFFYFY
FMDIYSPLSMIRLVRVFRALRLHPIAAGIRSLLWALKMSFPALFNIGLLFIMTMFTYAVV
GMSQFRYVKKSAMIDDLVNFETFGNSMMTMFLISTITGWDGLLFPFMSMPPDCDPFLENT
GTSVRGDCPNTYFGIIFLTSYIIICFVLMLSVFFVIILEIFDMFAEDDDEALSNDDLQMF
YDTWKRFDSNASQCIQYSQLSEFCDALKDTLRIPKPNTIKLINMDLPLLPGDKIHYMDIL
LALRTQVFGVSGQVDDLKANMEKKFKAENSSEVPYNPISSTLRRKKEEAAAAAIQRVYRK
WRLASKDGKEGLSSQMNGGSKQTEKEPATNGEMRT
NT seq 3888 nt   +upstreamnt  +downstreamnt
atgggaagcctggcgaacaaatgtagtcttgatttccgcacgttcagcaacttcaccagc
tatgaggactttctcgcagatcaagaatacaaatactacaggcctggacagttagatgcc
cttctttgtggaaacatgtctactgccggggtctgtccggagggatacatgtgtctgcgt
acaagaagcaacccaaattatggatacaccaactttgacacatttttttggagcctcctg
tctgctttaagaatgatgacccatgacttctggtacaacctcgccgagcttactgtgcgt
gccacaggtatgaccgccatagtctactttgcgatagtcatcttccccgcctcctactac
ctgctcagcctctttatgggcatggttgccatgacgacggctgagcacagtgaggccagt
gccgccgaggccaagcggagagaagaagatttcgccgaggtcctgcaggcgctgaagaag
tgcgaggtggaggaggtgagatcatcacacttgacaaaggaccacagatcgcgttctcca
tgctgttcgtccttttccggtcacttcccgaagtgtggctgttggcagtggctccaacag
cggctctacaccttcgtcacggatccatttttcgaacttggcatcgtcatttgcctcatc
gtcaacatcatgtttttgtctatggaacattatccgatgacagaaacgtttgaaggagtg
ctgagcagaacagatttgttcttcgtattcatctacacccttgagatgatcctcaaactt
gttgccatgggcctgtctggctacttcaagatgagctggaatgtctttgaattcgccatc
gtctgctcgagtctgagcgagctgatattggctgacattgagggttatgcgatgatgaga
agcttcggattgttacgagtcatccggctggccaagtggtggccggccttcaacatgctg
ctgcggatcatgaggaactcgatgggggctctgaggaacctgactctgcttctcgtcctc
atggtcttcttcttctccgtggccggcatgcagctgtttggtcaggactacaccagatgc
gtctgcaagatcagcgccgactgtgagcttcctcgctggcacatggtagacttctatcac
tccttcctcatggtcttcaggaccatgtgcggagactggatcgagacactgtgggactgc
atggaggtctcgagtcactcagtgtgtatgatcttccacatcacggtcctggtcttcgga
aagctgttgatcctgggtctgttcatgggcttgttgttatctaatctggcagctccagaa
gaagacaaagaaggagaagaaaaaaataaattaaagatcgccatgaaccgcatcaagaag
gcctggacccgtgtcaaacccaacaacactgatgggaccgaacctgatacagttaccagc
aagggagacggcaggaaggaatacctggctttgacttctgtgaccacagagcagccggcg
tcaaagaaagttgaggagaagaaaggcgataaaaatcaggacagacacacactcgaggac
tgctgctgtgacatgtgctaccagtgctgttcgttcccggaaacaaacacgtgccggggt
gtattgaggatctggtctaacctcaggagatgctgtttgtccatcgtagaacacatatac
tttaagtggttcatcaccttgatcgtcgtgctgagctctacaactctggtggctgaggac
atctacctggaatcccgtcaaattttgaaggcgatactgaagtacgcagacctggtgttt
actattgtgttcgtggtggagatgattctcaagatggttggctacggattaaagagatac
ttcaccaaaaactggtgctggcttgacttctccgtcgtagtggtgtccctgatttctttg
acagtcgacatgctggaattgcccgcttttactttgaagggcttgaagactctgaggtct
ctgaggatggtgtctcgcttcaggaacacaagggtggtgatgaacgccctggtctgcgtc
ttaccgtccctctttgaggtgctgctggtcggtttgaccgtctggttgttcttcggcgtg
atcggagtggaattattcgcaggaaggttttatcactgtattaacgagacatctcaggat
tatttcccagctgaagaggtggaaaacaagacagagtgtttctttttttctgaagaagag
attgatgttcgctggaagaacatgccgttaaacttcgaccacctgcttgctgcctacctg
tcactgctaaatctggctaccggtgcctggtatgacgtcatgtacgcagctgtggactcc
agaaaggtggaggaccagccggagtatgaagccaatttatacatgtacctgttctacgtc
accttcgtcatcagctgcttcttctttttgaacctcttcatcagagtcctaatcgacacc
atcaacaagctgagacacaagatatgtaaaaacatcttcttcacggaggggcagaaaaac
atgtacaagatacagaagaagaagttaaaccagactccgatacctcctcgacctcagaat
aagtgccgtgctggcgtcttcagcctggtgaccagctggtatttcgaagtcttcatggtc
gcagtgatctgcatcaacattgtggttctgatgtttgagacgaacgacgacagcgaagag
aaggaagaagtcctgcattggatacatttcatcatcgtcgtcatcttcctcatagagagc
atcctgaagattgtcgctttcggacgggactacttcaaagactggctgaacatctgggac
tttgtgctcgtcctcctgtctatcctaaacatcttctttgcagatttcttctacttttac
ttcatggacatctacagtccgttgagcatgatccgattggtccgtgtcttccgtgccctc
cgtctccaccccatagccgctgggatccgatcgctgctctgggctctgaagatgtcattt
cctgccctcttcaacatcggcctcctcttcatcatgaccatgttcacctacgccgtcgtc
ggcatgtcacagttccgctatgtcaagaaaagcgccatgatagacgacctcgttaacttt
gagacatttgggaacagcatgatgacgatgtttctcataagcacgataaccggatgggac
ggtctgctctttcccttcatgtccatgcctccagactgcgatcctttcttagaaaacacg
ggaacctcagtcaggggagactgtcccaacacgtacttcggcatcatcttcttaacgtcc
tacatcatcatctgcttcgtgctgatgctcagcgtgttcttcgtcatcatcctggagatc
ttcgacatgttcgcagaggacgacgacgaggcgctgagcaacgacgacctccagatgttt
tatgacacctggaagaggttcgactccaatgcttcgcagtgcatccagtacagtcagctc
tcagagttctgcgatgctctgaaggatactctaaggattcccaaaccaaacaccatcaaa
ctgatcaatatggacctgcctttgctccctggagataagatccactacatggacatcctg
ctggccctcagaacccaggtgtttggtgtttcaggacaggtggacgatctcaaagccaac
atggaaaaaaagttcaaggccgaaaactcatctgaggtgccgtataacccaatcagcagc
accctgcgcaggaaaaaggaagaggcggcggcagcagccatccagagagtgtacaggaag
tggaggctggcgtccaaagatgggaaggagggactaagcagtcagatgaacggaggcagc
aagcagacggagaaagagcctgccactaacggggagatgagaacctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

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