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KEGG   Sarcophilus harrisii (Tasmanian devil): 100923258
Entry
100923258         CDS       T02286                                 
Symbol
SCN4A
Name
(RefSeq) sodium channel protein type 4 subunit alpha
  KO
K04837  voltage-gated sodium channel type IV alpha
Organism
shr  Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:shr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:shr04040]
    100923258 (SCN4A)
Ion channels [BR:shr04040]
 Voltage-gated cation channels
  Sodium channel, voltage-gated (Nav)
   100923258 (SCN4A)
SSDB
Motif
Pfam: Ion_trans Na_trans_assoc IQ_SCN5A_C PKD_channel IQ GPHH
Other DBs
NCBI-GeneID: 100923258
NCBI-ProteinID: XP_003768502
Position
4:323078347..323137508
AA seq 1812 aa
MASPPVPLLVPPGPDCLRPFTPESLQAIEKRAIEEEARLLRNKQLEIEDPERKPRSDLEA
GKNLPLIYGDPPPEIIGIPLEDLDPYYSDKKTFIVLNKGKAIFRFSATPALYMLSPFSGI
RRLAIKILIHSLFSLFIMITILANCVFMTMSEPPPWSKNVEYTFTGIYTFESLIKMLSRG
FCIDDFTFLRDPWNWLDFSVIMMAYLTEFVDMGNISALRTFRVLRALKTITVIPGLKTIV
GALIQSVKKLSDVMILTVFCLSVFALVGLQLFMGNLRQKCVKWPPPISDINETWYDNGTA
LFSNDTGFGNDTLYSNFTFDWDAYINDEGNFYFLDGANDALLCGNSSDAGHCPEGYECMK
AGRNPNYGYTSYDTFSWAFLALFRLMTQDYWENLFQLTLRAAGKTYMIFFVVIIFLGSFY
LINLILAVVAMAYAEQNDATLAEEQEKEAEFQQMLEKLKKHQEEQEKLVSAQAALESGEG
DGDQIQGKDCNGGLDSGEVQSNPQRQSCSMDSAVSDAMEELEEAHQKCPPWWYKCAHTLL
VWNCCAPWVKLKKILHLIVMDPFVDLGITICIVLNTVFMAMEHYPMTPEFEHVLTVGNLV
FTGIFTAEMVLKLIAMDPYEYFQQGWNIFDSFIVTLSLVELGLANVQGLSVLRSFRLMRV
FKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKIDSS
CSLPRWHMHDFFHSFLIVFRILCGEWIETMWDCMEVAGQPMCLTVFLMVMVIGNLVVLNL
FLALLLSSFSADSLAASDDDGEMNNLQIAIGRITWGIDYAKAFILALLHGQILAPGDMKT
KKAEEGEGGEEEKKEQQQQQQQEEEEDLKKDNHILNHIDVVESPPTSIELDHMNFINNPY
LTVQVPIASEESDLEMPTEEETDTFSEAEEIKKPPPLKCDGNSSVCSTADYKPPEEEEQP
QEEENPEGELPEECFTEACVKRFPFLYVDITSDRGKIWWNLRKACFRMVEHNWFETFIVF
MILLSSGALAFEDIYIEQRKVIRTILEYADKVFSYVFVLEMLLKWVAYGFKVYFTNAWCW
LDFLIVDVSIISLVANWLGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALLGAIPS
IMNVLLVCLIFWLIFSIMGVNLFAGKYYRCINTTTSEIFDISEVNNKSDCFKLMDTGEVR
WVNVKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSREIEEQPQYEVNIYMYIYFVFFI
IFGAFFTLNLFIGVIIDNFNQQKKKFGGKDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPQ
NKIQGMVYDFVTKQMFDIMIMFLICLNMVTMMVETDDQSQLKIDILYNINMVFIIIFTGE
CVLKMVALRHYYFTVGWNIFDFVVVILSIAGLALSDLIQKYFVSPTLFRVIRLARIGRVL
RLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFAYVKKESGIDDIFNF
ETFGNSIICLFQITTSAGWDGLLNPILNSGPPDCDPELENPGSSVKGDCGNPSIGICFFC
SYIIISFLIVVNMYIAIILENFNVATEESSEPLGEDDFEMFYETWEKFDPDATQFIAYSR
LSDFVDTLQEPLKIAKPNKIKLITLDLPMVPGDKIHCLDILFALTKEVLGDSGEMDALKQ
TMEEKFMAANPSKVSYEPITTTLKRKQEEVCAVKIQRAYRRHLLRRSMKQASYLYRHSGD
SSGFEAPEKEGLIADAMNKMYGNNSSQKEEDKAKGEAGPALGLMPIDAPNSSQPSPEPQG
QGVRPGVKESLV
NT seq 5439 nt   +upstreamnt  +downstreamnt
atggcaagcccacctgtgcctttacttgtgccccctggacccgactgcttgcgtcccttc
actcctgagtccctgcaggccatagagaagcgggcaatagaagaggaggcaagactcctt
cgaaataagcagctcgagattgaggaccctgagaggaagccacgaagtgacctggaagca
gggaagaatctacccctcatctatggagaccctccacctgagatcattggcatccccctg
gaggatctggatccctactacagtgacaagaagaccttcatcgtgttgaacaagggcaag
gccattttccgattctcagccaccccagccctgtatatgctgagccccttcagtgggata
aggcgtttggccatcaaaattctcatccattcattgttcagcttgttcatcatgatcacc
atcctggcaaactgtgtatttatgaccatgagtgaacccccaccctggtctaaaaacgtg
gagtacacctttacaggaatctacacttttgagtctctcatcaagatgctctctcgaggt
ttctgcattgatgacttcacatttctccgggacccctggaattggctagacttcagtgtc
atcatgatggcgtatctgacagaatttgtggatatgggcaacatctcagccctgagaacc
tttcgtgtgcttcgagccctgaagactataacagtcattccaggactgaagacaattgta
ggggcgctgatccagtccgtgaagaagctgtcagatgtgatgattctcacagtcttttgc
ctgagtgtttttgccttagttgggctacagctgttcatgggaaatctcaggcaaaagtgt
gtgaaatggccacccccaatcagtgatatcaatgagacttggtatgacaacgggacagcc
ttgttcagcaatgacacaggttttggtaatgacacgttatacagcaactttacctttgac
tgggatgcctacatcaatgatgaagggaatttctatttcctggatggtgccaatgatgcc
ctgctctgtggaaatagcagtgatgcagggcactgccctgagggctatgagtgcatgaag
gctggccggaatcccaactatggctataccagttatgacaccttcagctgggcctttctt
gccctcttccgactcatgacacaagactactgggagaacctcttccagttgacccttcga
gcagctggcaagacctacatgatcttctttgtagtcatcatcttcctgggctccttctat
ctcatcaacctcatcctggcggtagtagcaatggcctacgcagaacagaatgatgctacc
ctggcagaggagcaagagaaggaggcggagttccagcagatgctagagaaactcaagaag
catcaggaggaacaggagaaactggtcagtgctcaagcagccctggaaagtggtgagggg
gatggagaccagatccaggggaaggactgcaatggcggactggattcaggagaggtacaa
tctaacccccaaagacaaagctgcagcatggatagtgccgtctcggatgccatggaagag
ttggaggaggcccatcagaagtgcccgccatggtggtacaagtgtgcccatacattgttg
gtgtggaattgctgtgctccgtgggtcaagctaaagaagattttgcacctgattgtcatg
gacccctttgtggacttgggcatcaccatctgcattgtgctcaacaccgtcttcatggcc
atggagcattaccccatgactcccgagtttgagcatgtgctcactgtgggcaatctggtt
ttcacaggcatcttcactgcagagatggtgctgaaactgattgcgatggatccctatgag
tacttccaacaaggatggaacatctttgacagttttattgtcaccttgagcttggtagag
ctgggactggccaatgtgcaagggctgtctgtgcttcggtccttccgcttgatgagagtc
ttcaaactggccaaatcctggcccacactgaatatgctcatcaagatcattggcaactct
gtgggagctttggggaacctgacattggtgttggccatcattgtcttcatcttcgctgtg
gtgggcatgcaactctttgggaagagctacaaggagtgtgtgtgtaagattgattccagc
tgcagcctgccccgctggcatatgcatgacttcttccattcctttctcatcgtcttccga
atactgtgtggcgaatggatcgagaccatgtgggattgtatggaggtggccggtcagccc
atgtgtctcactgtcttcctcatggtcatggtcattggaaatcttgtggttctgaatctg
ttccttgccctgctcctgagctccttcagtgctgacagcctggcagcctctgacgacgat
ggggagatgaacaaccttcaaattgccattggacgtatcacctggggcattgattatgcc
aaagccttcatcctggctctcttacatggtcagatcctggctcctggggacatgaagact
aaaaaggctgaggagggagaaggtggcgaagaagagaagaaggagcagcaacagcagcag
cagcaagaggaagaggaagacttaaaaaaggacaatcacatcctgaaccacattgatgtg
gtagaatccccaccaaccagtattgaacttgaccacatgaactttatcaacaacccatac
ttgacagtgcaggtgcccatcgcttctgaggagtctgacctagagatgcccacagaggag
gaaacggacacattttctgaggctgaagagatcaagaagccaccacccctcaagtgtgat
gggaactcctcggtatgcagcacagctgactacaaaccacctgaggaagaagagcagccc
caagaagaggaaaaccctgaaggagagctccccgaggagtgtttcactgaggcttgtgta
aagagattccctttcctctatgtggacatcacctcggatcgggggaaaatatggtggaac
cttcgaaaggcttgcttcaggatggtggaacacaactggtttgagacattcattgtgttc
atgattctacttagcagtggagccttagcattcgaagatatctacattgaacaacggaag
gtgatccgaacgatcctagagtatgcggacaaggtcttctcctatgtatttgtcttggag
atgctgctcaagtgggtggcttatggctttaaagtgtatttcaccaatgcctggtgctgg
cttgacttcctcattgtagatgtctccatcatcagcctggtagccaactggttgggctat
tctgaacttggtgccatcaagtcactccggacacttcgggcccttagaccactccgggcc
ctgtccagatttgaaggcatgagggtggtagtgaatgccctcctgggtgccatcccttcc
atcatgaatgtgttgcttgtttgcctgatcttctggctcatcttcagcatcatgggtgtc
aacttgtttgcggggaagtattaccgatgcatcaatactaccacctcggaaatttttgac
atctctgaagtcaacaacaagtcagattgcttcaaactgatggacacaggggaggttcga
tgggtcaatgtcaaggttaactttgacaatgtgggccttggctacctctcactcctgcag
gtggctactttcaagggctggatggacatcatgtacgcagctgtggattctcgagagatt
gaagaacaaccccagtatgaagtgaatatttatatgtacatctacttcgtcttcttcatc
atctttggagcattcttcaccctcaatctcttcattggagtcatcattgacaacttcaat
cagcaaaaaaagaagtttggaggaaaggacatcttcatgacagaggaacagaagaaatat
tataatgccatgaaaaaactgggctccaagaagccacagaagccaattcctcgacctcag
aacaagattcagggcatggtgtatgactttgtgaccaagcagatgtttgacatcatgatc
atgttcttgatctgtctcaacatggtcaccatgatggtggagacagatgaccagagccag
ctcaagattgacatcctttacaatatcaacatggtcttcatcatcatcttcacgggcgag
tgtgtgctcaagatggtagcgctgcgtcattactacttcactgttggctggaacattttt
gactttgtggttgtgatcctctccattgcgggtcttgccctttctgacttgatccagaaa
tactttgtttcgcccactctgttccgagtaattcgtctggctcggatagggcgcgtcctg
agactgatccgaggtgccaaaggtatccggaccttgctcttcgccctcatgatgtctctc
cccgccctcttcaacattggtctgctcctcttcctcgtcatgttcatctactccatcttt
ggcatgtcgaactttgcctatgtgaagaaagagtctggcattgatgacattttcaacttt
gagacctttggcaacagcatcatttgccttttccagattaccacctcagctggctgggat
gggcttctgaaccccatccttaacagtgggccccccgactgtgaccctgagctggaaaac
ccaggcagcagcgtcaaaggtgattgtggcaatccttccatcggcatctgcttcttctgt
agctacatcatcatctccttcctcattgttgtcaacatgtacatcgccatcattctggag
aacttcaatgtggccactgaggagagcagtgagccactgggggaagatgactttgagatg
ttctatgagacatgggaaaagtttgacccagatgccacacaattcattgcctacagtcgc
ctctctgactttgtggacaccctacaggagcctctgaagatcgccaaacccaacaagatc
aaactcatcactctggatctgcctatggtccctggagacaagatccactgcctcgatata
ctctttgctctaactaaagaggttctaggagactctggtgagatggatgccctcaagcag
accatggaggagaagttcatggcagccaacccatccaaggtctcctatgaacccatcacc
actacactgaagaggaagcaggaggaggtatgtgctgtgaaaatccaaagagcctaccgc
cgacatttacttaggcgttcaatgaagcaagcctcttatctctatcggcatagtggagat
agcagcgggtttgaggctccagagaaggaggggctgattgccgatgccatgaacaagatg
tatgggaataacagctcccagaaagaagaagacaaagcaaaaggggaggctggtcctgcc
ctgggtctcatgcccattgatgccccaaactcaagccagccatccccagaaccacagggg
caaggagtccgcccaggggtcaaggagtcacttgtctaa

  All links  
Gene (37)   
   RefGene (34)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (45)   

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