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KEGG   Strigops habroptila (Kakapo): 115617092
Entry
115617092         CDS       T08851                                 
Symbol
RXRA
Name
(RefSeq) retinoic acid receptor RXR-alpha
  KO
K08524  retinoid X receptor alpha
Organism
shab  Strigops habroptila (Kakapo)
Pathway
shab03320  PPAR signaling pathway
shab04148  Efferocytosis
shab04920  Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:shab00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    115617092 (RXRA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:shab03000]
    115617092 (RXRA)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:shab03310]
    115617092 (RXRA)
Transcription factors [BR:shab03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    115617092 (RXRA)
Nuclear receptors [BR:shab03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   115617092 (RXRA)
SSDB
Motif
Pfam: Hormone_recep Nuc_recep-AF1 zf-C4 tRNA_bind_3
Other DBs
NCBI-GeneID: 115617092
NCBI-ProteinID: XP_030363062
Position
15:599772..693555
AA seq 467 aa
MDTKHFLPLDFSNQVNSSSLNSPTSRGPMATPSLHPSIGPGIGSSLGSPGQLHSPISTLS
SPINGMGPPFSVISSPMGPHSMSVPSTPSLGFGTSSPQLNSPMNSVSSTEDIKPPLGLNG
VLKVPAHPSGTMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNK
DCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRGKDRNENEVESTSSANEDMPVEKI
LEAELAVEPKTETYIEANMGLTPSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLD
DQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVS
KMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEAYCKHKYPDQPGRF
AKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQMT
NT seq 1404 nt   +upstreamnt  +downstreamnt
atggacaccaaacacttcctgccgctcgatttctccaaccaagtcaattcctcgtccctg
aactctcccacaagccgggggcccatggccaccccatccctgcacccgtccatcgggccg
ggcatcggttcctcgctgggctccccgggccagctccactcgcccatcagcaccctgagc
tcgcccatcaatggcatgggacctccgttctccgtcatcagctcccccatgggcccgcac
tcgatgtccgtcccctccacacccagcctgggattcggcaccagcagcccacagctcaac
tcgcccatgaactccgtcagcagcacagaagacattaagccccccctggggctcaacgga
gtcctcaaagtgccagcacatccctcaggaacgatggcctccttcaccaagcacatatgt
gccatctgcggggacagatcttcaggaaagcattacggggtttacagctgtgagggctgc
aaaggcttcttcaagcgcacggtgcggaaggacctgacctacacgtgccgcgacaacaag
gactgcctgatcgacaagcgccagcgcaaccgctgccagtactgccgctaccagaagtgt
cttgccatgggcatgaagcgagaagccgtccaagaggagaggcagcggggcaaggaccgc
aacgagaacgaggtggagtcgacaagcagcgccaacgaggacatgcccgtggagaagatc
ttggaggctgaactcgcggtggagccaaagacagagacgtacatcgaagcaaacatgggc
ttgacgccgagctcgcccaatgacccggtgacaaacatatgccaggcagcagacaaacag
ctcttcaccctggtggagtgggccaagaggatcccccacttctcggagctgcccctggac
gaccaggtcatcttgcttagagcagggtggaacgagctcctaatcgcctccttctcccac
cgctccatagccgtgaaagacgggatcctgcttgccaccgggctgcacgtgcaccggaac
agcgcgcacagcgccggcgtcggggccatcttcgatagagtactgacagaactcgtgtca
aaaatgcgagacatgcagatggacaagacagagctaggctgcctgcgagccattgtcctc
ttcaaccccgactcaaaaggtctctccaacccagctgaggtggaggcgttgcgggagaag
gtgtacgcgtcgctggaggcttactgcaaacacaagtaccccgaccagcccgggaggttc
gccaagctcctgctgcgtctcccagccctccggtccatcggcctcaaatgcctggagcac
ctcttcttcttcaagctaataggcgacacgccgatcgacaccttcttgatggaaatgctg
gaagcacctcaccaaatgacttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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