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KEGG   Sinocyclocheilus grahami (golden-line barbel): 107556936
Entry
107556936         CDS       T04918                                 
Name
(RefSeq) retinoic acid receptor RXR-alpha-A-like isoform X1
  KO
K08524  retinoid X receptor alpha
Organism
sgh  Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03320  PPAR signaling pathway
sgh04148  Efferocytosis
sgh04920  Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:sgh00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    107556936
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:sgh03000]
    107556936
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:sgh03310]
    107556936
Transcription factors [BR:sgh03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    107556936
Nuclear receptors [BR:sgh03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   107556936
SSDB
Motif
Pfam: Hormone_recep Nuc_recep-AF1 zf-C4 tRNA_bind_3
Other DBs
NCBI-GeneID: 107556936
NCBI-ProteinID: XP_016095688
Position
Unknown
AA seq 498 aa
METKPFLSLGFLKPHCSMPPQRGRAEACTCFSGMCALHQRRLSTDCSGQMTSSPLSSPTS
HRGMHPSLLSPTSLGHSGSLHSPISTLSSPMNGLGSPFSVISSPMGPHSMVSPGMGYGPS
ISPQLNSPMNSVSSSEDIKPPLGINGVMKVPVQPLGTPLSLSKHICAICGDRSSGKHYGV
YSCEGCKGFFKRTVRKDLTYTCRDSKDCIIDKRQRNRCQYCRYQKCLAMGMKREVLLHTA
VQEERQRAKDRNENEVESTSSVNEDMPVEKILEAELAVEPKTETYIETNVPMPSNSPNDP
VTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSISVKDGI
LLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLS
NPGEVEALREKVYASLEAYCKQKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGD
TPIDTFLMEMLEAPHQMT
NT seq 1497 nt   +upstreamnt  +downstreamnt
atggaaaccaaacctttcttgtcattggggttcctgaaaccccattgctcgatgccacct
cagagaggacgagcagaagcatgcacgtgtttcagcggaatgtgtgctcttcatcaacgc
aggctttctacagactgctcgggacagatgacgtcctctcctctcagctctcccacatcc
caccgggggatgcacccatcactgctgagcccgacttctttaggccactcagggtctctg
cactcccccatcagcactctgagctcacccatgaacggcctgggctctcccttctctgtc
atcagctcacccatggggccacattccatggtgtcacccgggatgggctacggccccagc
atcagcccacagctgaactcgcccatgaactctgtcagcagctcagaagatatcaagccg
cccctgggcatcaacggtgtgatgaaggtgccagtccagcccttgggcacccccctttcc
ctctccaaacacatctgtgccatctgcggcgaccgctcctcaggtaaacactacggtgtg
tacagctgcgaggggtgcaagggtttcttcaagaggactgtgcgtaaggacctgacttac
acttgtcgagacagcaaggactgtattatcgacaagcgccagcgcaaccgctgccagtac
tgccgctatcagaagtgtttggccatgggaatgaagagagaagtgttgttacatacagcc
gtccaggaggagcgccagcgagccaaggaccgcaacgagaacgaggtggagtcgaccagc
agtgtgaacgaagacatgcctgtggagaagatcttggaggcggagcttgctgtggagccc
aagacggagacttacattgaaaccaatgtaccaatgccctcgaattcacccaatgatcca
gtcacaaacatctgtcaggccgcagacaagcagctcttcactctagtggaatgggccaag
aggatcccgcatttttcagagctcccgctggacgaccaggtcattcttctacgagcagga
tggaatgagctcctcattgcgtcattttcacaccgttcaatatcagtgaaagatgggata
ctgttggccacaggattgcatgtgcaccggaacagcgcccacagcgccggagtaggagcc
atatttgacagggtgctgacggaattggtgtcaaagatgagagacatgcagatggataaa
acagagctagggtgccttcgagccatcgtcctcttcaacccagactccaaaggcctgtca
aacccaggtgaggtggaggcgctgagagagaaggtctatgcctctctggaagcctactgc
aaacagaagtaccctgaacaacctggaaggtttgctaagctgttgctgcggctccctgcc
ctgcgttccattggactgaaatgtttggagcatctgttcttcttcaagctcataggagac
acgcccatcgataccttcctcatggagatgctagaggcgccccaccaaatgacataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (19)   

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