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KEGG   Seriola dumerili (greater amberjack): 111220529
Entry
111220529         CDS       T05606                                 
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1D-like
  KO
K04851  voltage-dependent calcium channel L type alpha-1D
Organism
sdu  Seriola dumerili (greater amberjack)
Pathway
sdu04010  MAPK signaling pathway
sdu04020  Calcium signaling pathway
sdu04218  Cellular senescence
sdu04260  Cardiac muscle contraction
sdu04261  Adrenergic signaling in cardiomyocytes
sdu04270  Vascular smooth muscle contraction
sdu04530  Tight junction
sdu04912  GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:sdu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:sdu04040]
    111220529
Ion channels [BR:sdu04040]
 Voltage-gated cation channels
  Calcium channel, voltage-gated (Cav)
   111220529
SSDB
Motif
Pfam: Ion_trans CAC1F_C Ca_chan_IQ GPHH PKD_channel DUF4834 PFF1_TM
Other DBs
NCBI-GeneID: 111220529
NCBI-ProteinID: XP_022599333
Position
Unknown
AA seq 2248 aa
MQEADEQSEGKTYASNRRTTPSTDASALWSESHTRLHLLHPPEPLQAPASTGKPVGSSYG
LLGANSGIQGLGGPGSGVSPVLAWHAAISAARQAQDDPAKHEMSSRPSVCTTGPAPVGSL
AQRKRQQYAKSKKQGGSTNSRPPRALFCLTLNNPIRRACISLVEWKPFDIFILLSIFANC
VALAIYIPFPGDDSNSTNQELETVEYAFLIIFTIETFLKIIAYGLVMHQNSYVRNGWNML
DFVIVIVGLFSVVLEMITKDADSGGQSGGKPGGFDVKALRAFRVLRPLRLVSGVPSLQVV
LNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFIGKMHATCYVVQTGALAEEEPTPCAVS
GHGRHCLLNGTGCREGWQGPNNGITNFDNFLFAMLTVFQCITMEGWTDVLYWMNDAMGFE
LPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQLEEDLKGYLD
WITQAEDIDPENEEEGDEESKRNRVTLADLTEKKKGKFGWFTQSTETQASMPTSETESVN
TENHNGEEDKSPCCGPLCQKITKSKCSRQWRRWNRFCRRKCRAAVKSVTFYWLVIVLVFL
NTLTIASEHYNQPDWLTEVQDVANKVLLAMFTMEMLVKMYSLGLQAYFVSLFNRFDCFVV
CGGIVETILVELAIMSPLGISVFRCVRLLRIFKVTRHWASLSNLVASLLNSMKSIASLLL
LLFLFIIIFSLLGMQLFGGKFNFDETVTKRSTFDNFPQALLTVFQILTGEDWNTVMYDGI
MAYGGPSSSGMVVCIYFIILFICGNYILLNVFLAIAVDNLADAESLNTAQKEEEEAKKRK
NSAKDTSTEKRRVEITESKDGETKVPAKALLEEDKELYPAIDSPVCDDDDNDDLPEVPSG
PRPQRLSELSIKEKTPPIPEGSAFFIFSSTNLFRVFCHKLINHQIFTNLILVFIMLSSVS
LAAEDPIRNFSARNIILGYADYVFTSMFTFEILIKMTAFGAFLHKGAFCRNYFNLLDLLV
VGVSLVSFGIQSSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIMIVT
TLLQFMFACIGVQLFKGKFYRCTDDAKNSPEECKGTYILYNNGDTALPMVRERIWYNSDF
NFDNVLMAMMALFTVSTFEGWPTLLYKAIDSNRENMGPIYNYRIEISIFFIIYIIIIAFF
MMNIFVGFVIVTFQEQGEKEYKNCELDKNQRQCVEYALKARPLRRYIPKNPYQYKFWYVV
NSTGFEYVMFVLIILNTLCLAIQHHGQSHLFNCAMDILNMVFTGVFTVEMILKLIAFKPR
GYVGDAWNVFDALVVIGSVVDIILSQSAALPVFKVIVEPGNTEDSARISITFFRLFRVMR
LVKLLSRGEGIRTLLWTFIKSFQALPYVALLIAMLFFIYAVIGMQVFGKIAMVDGTQINR
NNNFQTFPQAVLMLFRCATGEAWQEIMLACLPGKLCDSESDYNPGEERTCGSGFAIIYFI
SFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWSEYDPEAKGRIKHLDV
VTLLRRIQPPLGFGKLCPHRVACKRLVAMNMPLNSDGTVMFNATLFALVRTALKIKTEGN
LEQANEELRAVIKKIWKRTSMKLLDQVVPPAGDDEVTVGKFYATFLIQDYFRKFKRRKEQ
GLMGRHSWERLNTTMALQAGLRTLHDIGPEIRRAISCDLQEEGLVDPNGEEEAEIYRRNG
GLFGNHVNHVGGDQQGSSHPTTVTKRPLQILPFSCNSSTEPPQIGRRASSNYREGETEIN
SPPIQYNHHYHSPHPYNYPHCNSTCHQSPIPSNANLNNANVPSLLSMTTGRQQKCLLRRD
RPSSTKNGSSAITRSKGAQDKPWRSHSTRTRYREAYIRSESGGGLYPTICQQEPGGVDSD
DERGSGEYYSGEEFHEDDIMLTKNRLSNKDQLDAERDFDLEVSGGNHQPDSYYDDDQQLI
CQDSRRLPRRWLLPSPQASNRPTFSFECLRRRSSQDDAPPSPSCTALPLHLVQQQVMAVA
GLDVSRIHHLSPTRSLCSWATPPASPISLDCSPCYTPLIQVDWSSPGSVGSIPRAVKRSS
WYTEGQDGPPTRSHSPSRLQLPAESCTHFLQKRGSANSLVEAVLISEGLGKYARDPKFVS
ATKHEIADACEMTIDEMESAASNLLNGCTGNGNNGGAGNVTSDPHAATHFRDCSIRDCSI
RDYSDEEPYMAMKCEEDLTDEMICITSL
NT seq 6747 nt   +upstreamnt  +downstreamnt
atgcaagaagcagatgaacagtctgaaggtaaaacctatgccagcaatagaaggaccact
ccctccactgatgcttcggcgctctggtcagaaagccacacccgtctgcacctgctccat
ccaccggagcccctgcaggccccggccagcactggcaagcctgtcggctcctcttatggc
ctcctcggggccaatagcggcattcagggccttggtggccctggctccggtgtcagccca
gtccttgcttggcatgccgccattagtgctgcccgccaagcacaggacgatcctgcaaag
catgagatgagttcccggccctcagtttgcaccactggacctgctcctgtaggctcactg
gcccagaggaagaggcagcagtacgccaagagcaaaaaacagggaggatctacaaacagc
aggccacccagagcgctgttctgcctcaccctcaacaaccccatccgcagggcctgcatc
agtctggtggagtggaaaccatttgatatctttatactgctgtctatttttgccaactgt
gtggccttagccatctacatccccttccctggagatgactccaattctaccaaccaagaa
ctggaaacagtagaatatgccttcctgatcattttcactatagagacatttctgaagatt
attgcctatggcctggtcatgcatcaaaactcctatgtcagaaacggctggaacatgctg
gactttgtcattgtcattgtggggttgttcagtgtggttctggagatgataaccaaagac
gctgactctggtggccagtctgggggtaaacctggggggtttgacgtcaaggccctccga
gcatttcgtgtgttacgaccccttcggctcgtttctggagttcccagtttacaggtggtt
ttaaactccatcattaaagccatggttcccctgcttcacatcgctctgcttgtcctcttc
gtcattatcatctacgccatcattggcctggaactcttcattggcaaaatgcacgccaca
tgctatgtggtacagacaggtgcccttgcagaagaagagcccacaccgtgtgcagtgtca
gggcacggccgtcattgcctgctcaatggtacaggttgcagagagggatggcaaggtccc
aacaacggcatcaccaactttgacaattttttgtttgccatgctcactgtgttccagtgc
atcaccatggagggctggactgacgtcctctactggatgaatgatgcaatgggctttgag
ctgccgtgggtttactttgtcagtctggtcatatttggatccttctttgtgctcaacttg
gtcttgggtgtgttgagcggagagttttccaaagagcgagagaaggccaaggctcgggga
gacttccaaaagctccgtgagaagcagcagttagaggaagacctaaagggctacctggac
tggatcacccaggctgaggacatcgaccctgagaatgaagaggagggagacgaggagagc
aagcgtaaccgggtcacattggctgacctcactgagaagaagaaagggaagtttggctgg
ttcactcagtccacagagacacaggcaagcatgcccactagtgagacagagtcggtgaac
acagagaatcacaatggagaggaagataaatcaccctgctgtggaccgctgtgtcaaaaa
attactaaatcaaagtgcagtcgtcagtggcggcggtggaaccggttttgccggaggaag
tgtcgtgcagctgtaaaatcagtgacgttttactggctggtcattgtcttggtgttcctc
aacactctcaccatcgcctctgagcactacaaccagccagactggctgactgaagtgcag
gacgtagccaacaaagttctccttgcaatgtttaccatggagatgctggtgaagatgtac
agtttgggactgcaggcctactttgtgtccctgtttaaccgctttgactgtttcgtggtg
tgtggaggcatcgtagagaccatcctggtggagctggccatcatgtctcctttgggcatt
tctgttttccgctgtgtacgcctccttaggatcttcaaagttacacgtcattgggcatct
cttagtaacctggtggcctctctgctcaactccatgaagtctatcgcctccctgttgctg
ctgctcttcctcttcatcattattttctccctgcttggcatgcagctgtttgggggcaag
ttcaacttcgatgagactgtgaccaagaggagcacgtttgataacttccctcaggccctg
ctcactgtgttccagatcttgacaggagaagactggaatacagtgatgtacgatggtatc
atggcatatggtggtccctcctcctctggaatggtggtctgcatttacttcatcatcctt
ttcatctgtggaaattacatcctgctaaatgtcttcttggctattgctgttgacaacctg
gcagatgcagagagcctcaacacagcacagaaggaggaagaagaggcaaagaagaggaag
aacagcgccaaggatacaagcacagaaaagaggagagttgaaataacagaatccaaggat
ggtgagaccaaggtgccagcaaaggccttgctagaggaagacaaagagttgtatcctgcc
attgactccccagtgtgtgatgatgacgataatgatgacctcccagaagtcccctctggg
ccccgcccccagaggctgtctgaactcagcatcaaagaaaagactccgccaatcccagag
ggcagcgccttcttcatcttcagcagcactaacctgtttcgtgtattctgccataagctg
atcaaccatcagatctttaccaacctcatcctggtcttcatcatgctcagctcggtctct
ctggctgctgaggaccccatacgcaacttctctgctcgcaatattatcctaggctatgca
gactatgtcttcactagtatgtttacatttgagatccttattaagatgacagcatttgga
gcgttccttcataaaggggcgttctgtagaaactacttcaacctattagacctgctagtc
gttggtgtgtctctggtgtccttcggcattcagtcctctgctatctccgtggtcaagatt
ctgcgtgttttgagagtcctccgcccactcagggccatcaacagagccaaaggactcaag
cacgtggtccagtgtgtgtttgtggccatcaggaccatcggtaacatcatgattgtcacc
accctgctgcagttcatgttcgcttgtatcggtgtgcagctcttcaaggggaaattttat
cgatgcacagatgatgcaaagaacagcccagaggagtgcaagggtacatacattctctac
aacaacggggacacagcactgcccatggtgagggagaggatctggtacaacagtgacttc
aactttgacaacgtcctcatggccatgatggctctctttactgtctccaccttcgaagga
tggcccaccttgttgtataaagccatcgattccaacagagagaacatgggtcccatctac
aactaccgcatcgagatctccatcttcttcatcatctacatcatcatcatcgccttcttc
atgatgaacatctttgttggtttcgtcattgtcaccttccaggagcagggggagaaggag
tataagaactgcgaactggacaagaaccagcgtcagtgtgtggagtatgctcttaaagct
cgtcctctgcggcgctacatccccaaaaacccctaccagtacaaattctggtatgtggtc
aactccactggttttgagtacgtcatgtttgtcctaatcatcctcaacaccttgtgtctg
gctatacagcaccatggtcagtctcatctgtttaactgtgctatggacattctcaacatg
gtcttcactggagttttcactgtggaaatgatcctcaagctcatcgccttcaaacccaga
ggctatgtcggggacgcctggaatgtcttcgatgccctggtggtgattggcagtgtagtc
gacatcatactcagccagtcggcagcccttcctgtcttcaaggtgatagtggagccaggg
aacacagaagacagcgctcgcatctccatcaccttcttccgcctgttcagggtgatgcga
ttggttaaactgctgagcaggggggagggcatcaggactctcctgtggacattcatcaag
tccttccaggctcttccttatgttgccctcctgattgccatgctgtttttcatatatgct
gtaatcggaatgcaggtgtttgggaaaatagccatggtggatggaacacaaatcaaccgc
aacaacaactttcaaacctttcctcaagctgtgctgatgctcttcaggtgtgctacaggt
gaggcctggcaagagatcatgctggcctgtctgccagggaagctgtgtgattcagagtca
gactacaaccccggagaggagagaacctgcggcagtggtttcgccattatctacttcatc
agcttctacatgctctgtgcttttctgatcatcaacctatttgtggctgtcatcatggat
aactttgactatctgacccgtgattggtccattcttggcccacatcacctggatgagttt
aaaaggatctggtccgaatacgaccctgaagccaagggcaggataaagcaccttgatgtt
gtgactctgctaaggaggatccaacctccgctgggctttggcaagctctgccctcacagg
gtggcgtgtaagcgtctggtggcaatgaacatgcccctgaacagtgatggcactgtcatg
tttaatgccactttgtttgctctggtccgaactgctctcaagattaagactgaggggaac
ctggagcaagccaatgaggagcttagagctgtgatcaagaagatctggaagaggaccagc
atgaagctgctggaccaagttgtgccccctgcaggcgatgacgaggtaacagtggggaag
ttctatgccaccttccttatacaggactacttcaggaagttcaagaggcgcaaagagcaa
ggtcttatgggacggcactcatgggagaggctgaacaccaccatggctttacaagccggc
ctgcgcacgctgcatgacatcggaccagagatccgtcgagccatatcttgtgacctgcag
gaggaggggctagtagatcctaatggagaagaagaggcggaaatttacaggcgtaatggt
ggtttgtttggcaaccatgtgaaccatgttggtggcgatcagcaaggctcctctcacccg
accaccgtcaccaaacgcccactgcaaatcctgcccttctcctgcaactcctcgactgaa
cccccccaaattggcaggagagccagcagcaattatagggaaggagagacagagattaac
tctccacccatccagtataatcatcattatcattcccctcatccgtataattaccctcac
tgtaattccacttgccatcagtcgccaataccctccaatgccaacctcaacaatgccaat
gtgccctcgcttctctccatgaccactgggaggcagcagaagtgtctgttaaggcgtgac
cgtccgtcctccactaaaaatggatcatcagcaataactcgcagcaaaggagcacaggac
aagccttggaggtcacactccacaaggacacgctaccgcgaggcctacattaggtcagaa
agtggtggtggactttaccccaccatttgtcaacaggagccggggggcgtggacagcgat
gatgagcgaggctcaggagagtactacagcggagaggagtttcatgaagacgacatcatg
ctcacaaagaacaggttgagcaacaaggaccaacttgatgcagaaagagactttgacctt
gaggtttctgggggcaaccaccagcctgatagttactatgatgatgatcaacagctgatc
tgccaagacagcaggcggttacccaggagatggttgttaccctcacctcaagcctccaac
agaccaacatttagttttgagtgtctccgcagaagaagtagtcaggatgatgctcctccc
tctccatcctgcacagctcttccactacacctggtgcagcaacaggtaatggctgtggct
ggtctcgatgttagcagaattcaccatctgtctccaacgaggtcgctgtgctcctgggcc
acgcctcctgcttcacccattagcctggactgctcgccctgctacacaccgctgatacag
gtggactggagcagtcctggcagtgttggcagcatccctagagcagtgaagaggagctca
tggtacacagaaggccaggatggccctcccacccgcagccactctccatcacgtctgcag
ctacctgcagagagctgcacacacttcttgcagaagagaggcagtgccaacagtctggtg
gaggctgtattgatctctgagggtctggggaaatacgccagagaccccaagtttgtgtca
gcgaccaaacatgagattgcggatgcctgtgagatgaccattgacgagatggagagtgct
gctagtaatcttctgaatgggtgtacgggtaatggcaacaatgggggggcagggaacgtc
acctcagacccacatgccgccacacattttagagactgcagtatccgtgactgcagtatc
cgtgactacagcgatgaggagccgtacatggctatgaaatgcgaggaggacttaacagat
gagatgatatgcatcacgtcactatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (8)   
   KEGG PATHWAY (8)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (7)   
   Pfam (7)   
All databases (26)   

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