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KEGG   Siniperca chuatsi (mandarin fish): 122881114
Entry
122881114         CDS       T08948                                 
Name
(RefSeq) collagen alpha-6(VI) chain-like
  KO
K06238  collagen type VI alpha
Organism
schu  Siniperca chuatsi (mandarin fish)
Pathway
schu04510  Focal adhesion
schu04512  ECM-receptor interaction
schu04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:schu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    122881114
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    122881114
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:schu04147]
    122881114
   00536 Glycosaminoglycan binding proteins [BR:schu00536]
    122881114
Exosome [BR:schu04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   122881114
Glycosaminoglycan binding proteins [BR:schu00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   122881114
 Hyaluronan
  Extracellular matrix or blood plasma proteins
   122881114
SSDB
Motif
Pfam: VWA VWA_2 Collagen Kunitz_BPTI vWA_SIBA-E
Other DBs
NCBI-GeneID: 122881114
NCBI-ProteinID: XP_044062815
Position
LG9:1340432..1399809
AA seq 2510 aa
MAKKTPRSKTNRPRKGRQKLTSRPSMKGRTSLLFFLIIAAYSYGIAAQAIECENATVADI
VFLIDGSTSIGTDSFQEVRYFLRNIIKALDIGPNKVRVGVAQYSDDPYQEFLLKDHMDKK
SLLAAVENLPYRKGGTETGKAINFLLTQYFTKDAGSRVSQRVPQIAVVITDGESTDDVVA
PAQRLRQQGVIVFGIGVGQINQKQLVSIANWPPDRFLFTINSYEALQRLTEGLLQTVCVS
VGQMKEALVDRFADVFFLVDNGMSQGLFSVFRSDLVKVINQMNVGASTYRVGLAQYGQDT
NVEFFLNAYQTKQETLVGVKRFRLRPESNEPRNLGSALEYASTRFFSKETGGRAHLGSRQ
FLVVLSAKDSDDPVSKAARKIKSEGITIIGMSAGATMDVIDRFASPGYAFDSSRLTRIKD
VIMIEKPETITEDCKGANVADIVFIVDESGSIGTDNFQLVRSFLHSIVSGLDVSPSNVRV
GIVTYNERPTAQVYLDTFNDKAEILQFIKILAYNGGGTYTGAALKFTQEELFIKKKGSRK
GVQQVAIVITDGKSQDSVSEAAIALRRAGVTIYAVGIENANEAELIEMASYPPYQHVFIE
KSFTKLKPLKQSLQKTLCSSIIHQAVTISTTTENIKEACEQKDEADIFFLMDDSGSIGNE
DFYDMKKFIIEFLHVFRIGPHHVRMGLVKYSDAATLEFDLTTHSDVVKLEKAVKGIAHKG
GGTNTGKALLSMGPYFEDAKRTRGHNVPRYLIVITDGKSSDKVLAPAESLRAQDVVIYAV
GVKDSNVTELEQIAGDPERTFFVSNFDALKSINNDIITDICSPDICKDIPVDVFFLTDSS
DSIDPEDFQKMKEFMISTINKSIIGQNKVHFGVMQFSTIQRLEFPLNRYYSKVEMEKVIN
DMQQMSEGTHTGKAITEVSKYFDATRGGRPNLSQKLIVITDGRAKDEVKGPAAALRAKGV
VVYAIGVGKAESSQLLELSGSLDRIYVGRTFDALKALESELALKICDPTRECKKIEKADI
IFLVDGSTSIDSTEFKSMQTFMQSIVNQTTVGKDLTRFGVILYSTETKLDFTLNTYDTRQ
GVLKAITNLVPPGGDTYTGKALAYSLEFFNTKHGGRKQRKVPQILMVITDGDATDHHKLK
PTSDALRDNQITVFSIGVKEAIRDQLETMAGGDISKVFYVDNFEALETLYKNISSVLCNS
TKPACEKDKADLVFLLDHSSSITRDNYKIMINFTKEVVNSFNVSEKSVHVGLAQFSDNPK
HEFDLDKYSKKEDVIIHIDNMEYRGGNTFIGKALDHIKDYFNTLRGGRSLVPKNLVLITD
GDSHDDVEDAADRVRALGIEVLVIGVGDVHDLQLLQITGTPERLFTVQNFNSLINIKKKV
VDTICKTPTDPPGCSIDIAMGFDISRRTGAPGEMLISGHTKLQTFLPEIVHYVSSVQGLC
CVTEPVNTNIAFQVVDRDGRSLYDTNFEVYNEDVVKKVMTLQMSEPTYFNTALLKSFNKR
FEMSNAGVKVLVIFTDGFDEDVMKLKHESELLRQSGVSALLTVALEGVRDPAQLQKVEFG
RGFGYKLPLSIGMPSVGSTILKQIDMVSDRECCNVMCKCSGHEGIHGSPGKPGIKGESGQ
KGQPGFPGEEGVIGERGPPGPSGPQGLQGCPGARGQKGYRGLSGNRGENGEDGLDGVDGE
QGLTGPDGARGERGHPGNPGIPGIRGEAGLKGQRGLRGDPGESGADNTVPGAKGEPGNPG
LPGPPGKDGRPGEGGIDGNPGPDGRRGAVGGKGAPGPPGAPGLRGSPGAPGPQGTRGENG
DRGPKGMSGFPGPQGGPGLPGDPGLAGRRGANGQKGQPGDPGVKGAPGSQGPRGQPGQDG
RDGYGSPGPKGAKGDPGFPGYPGLLGEDGLKGTKGYPGRKGNRGRGGNSGRPGESGVPGD
PGHPGHSGPRGPPGGKSMAECELVTYIRDNCACSHGHSECPAYPTELVFGLDMSEDVTPA
AFERQRSALLSLLEDINIAESNCPTGARVAVVGYSAYTKYLIRFHDYRRKKQLIESVKNI
ALERTSNTRQLGAAMRFVGQNVFKRVRAGILMRKVAVFFSNGPSQDVNDIVTAMMEYRGL
NIVPAVISLRNAPSVDRALQVDDTGNSIFTVLGRLQDLAADLSKVKNCAICYDPCKRLEQ
CAFIQDVPKPQEVDLDLVMVVDGSREVQADEYAGVQQLLGSVVEQLAVSPQPRRAGNQAR
VAVVQQSGTQATKVEFGLQAYQNHDLMKRHLIQKMQQQSGSSALGQTLEFSLKEVLLKAS
QPRRRRALLTVVGTQTGYRDRAKLHYISQKAKCEGVAMFVVTVSERYNRTQVEELASLPV
QQHLIHVGRLKADEQGYAQRFIRVFLTAINKGMNTYPPPSLKKTCNQLTDQEEEQFLNGQ
GSALLEEDLIMDEVAEKFQEQTGVQTQTAQLDVINTLTRRDRQSSLLGANLNDTCFLSQD
VGSCQNYTIMWFFDNEKGKCSRFWYSGCGGNENRFKSLKDCENLCLTKNP
NT seq 7533 nt   +upstreamnt  +downstreamnt
atggcgaagaagacgccgcgctccaaaacaaacaggccacgcaaaggaagacagaaactc
acgagccgtcccagcatgaagggaagaacgagtcttctattcttcctcatcatcgcagcg
tattcctatggcatcgctgctcaggcaatagagtgtgaaaatgccaccgtggctgacatc
gtcttcctaatcgatggctccaccagcattggcactgatagctttcaagaggtccggtat
tttctccgcaacatcatcaaggccctcgacatcggccccaacaaagttcgggtcggcgtg
gctcagtacagtgatgatccttaccaggagttcctgctgaaggatcacatggacaagaaa
tccctgctggctgcggtggaaaaccttccctaccgaaaaggaggcacagaaacgggcaag
gccatcaacttcctcctgacgcagtacttcaccaaagacgcagggagccgagtcagccaa
cgggtgcctcagatcgctgtggtcatcacagatggagagtccacggatgatgtggtagca
cccgcccagcgcctgaggcagcaaggagtcattgtgtttggcatcggggtgggacaaatc
aaccaaaagcagcttgtgtccatcgccaactggcctccagatcgcttcctgtttaccata
aatagctacgaggctctgcagaggctgacagagggtctgctgcaaactgtatgtgtctct
gtggggcaaatgaaagaagctttggtggacaggtttgcagatgttttcttcctggtggac
aatggcatgtctcaaggactgttctccgtgtttagatctgaccttgtcaaagtgatcaat
caaatgaatgttggagcgtccacctaccgtgtcggtttggcccagtacggtcaagatacc
aacgtcgaattctttctcaatgcttatcaaactaaacaggagaccctggttggtgtcaaa
cgtttccgcctgcgcccagaatccaacgagccacgtaacctgggcagtgctctggagtac
gctagcactcgctttttcagcaaagagacggggggccgtgcacacctaggctcccgacag
ttcctagtcgttttgagtgcaaaagactcagacgatcctgtgtctaaggcggctcgtaag
atcaaatcagaagggataactatcattgggatgagcgcaggtgcaacaatggatgtaata
gaccgttttgccagccctgggtatgcatttgattcttccagactaactcgtataaaagat
gtcatcatgattgagaaaccggagaccattactgaagattgcaaaggagccaatgtggca
gacatcgtgttcattgttgatgagtcgggaagcattggaaccgacaacttccagctggtg
cgctctttcctgcactcaattgtgagcggcctggatgtcagtccgtctaacgtccgagta
ggcattgttacatacaacgaaaggcccacagcacaggtctacctcgacacgttcaatgac
aaggccgaaatcctgcagttcatcaagatcctcgcttacaatggaggtggtacctacact
ggagctgccctaaagttcactcaggaagaactcttcattaagaaaaagggaagcaggaag
ggtgtccagcaggtggcaatagtgatcaccgacggtaaatcccaggattctgtgagcgaa
gcggcaatcgctcttcgtcgggctggtgtcaccatttacgctgtaggaatcgaaaatgcc
aacgaggccgaactgatagagatggcgtcttaccccccttatcagcacgtttttattgag
aaaagtttcaccaagcttaaacccctgaagcagagccttcagaaaaccctgtgcagtagc
atcattcaccaagctgtcacaatcagtacaaccacagaaaacatcaaagaagcatgtgaa
caaaaggatgaagcagacatcttcttcctgatggacgactcaggaagcattggtaacgaa
gacttctatgacatgaagaagttcatcattgagtttcttcatgtcttccgtattgggcca
caccatgtccgcatggggcttgttaaatactcagatgcggcaactttggaatttgacctg
acaacccactcagatgttgttaaactggagaaagctgtgaagggtattgcacacaaagga
ggtgggacaaacacaggaaaagcgctattatccatgggaccctactttgaagacgcaaag
agaactcgtggtcacaatgtcccacggtacctgatcgtcatcaccgatggaaaatcctcc
gataaggtcttggctcctgcagaaagtttgagggcacaggatgtcgtcatctatgccgtc
ggggtgaaagattcaaacgtgactgagctggaacagattgctggcgaccccgagaggact
ttctttgttagtaattttgatgccctgaagtccatcaacaatgacatcatcacagacatc
tgttctccagatatttgcaaagacataccggttgacgtctttttcttaactgatagctct
gacagcatcgatccagaagacttccagaaaatgaaagaattcatgatatctaccattaac
aagtccatcatcgggcagaataaggtgcattttggtgtcatgcagttcagcaccatccaa
agactagagtttcccctcaaccgctactacagcaaagtggaaatggaaaaagtcatcaat
gatatgcagcagatgagtgaaggcacgcacacaggaaaggccatcacagaggtgtcgaag
tatttcgatgcaaccagaggagggcgtcctaatctgagtcagaagctgatagtgataacc
gatggccgggccaaagacgaggtcaaaggccccgctgcagctctgagggccaagggagtg
gtggtctatgccattggagtggggaaagctgaatcttcccagctgttagagctcagtggt
tcattggacaggatatatgttgggaggacctttgatgcgctgaaggccctggagagcgaa
ttggccttgaagatctgcgatccaacgagagaatgtaagaagatagagaaagctgacatt
attttcctggtggacgggtccacaagcatagattcaacagagttcaaaagcatgcagaca
tttatgcagtcaatagtgaaccaaaccacagttggcaaggacctgactcgttttggggtc
attctctactccactgaaacaaagttggattttactctaaacacctatgacaccagacaa
ggcgttcttaaagcaataacaaatttggtgccaccaggaggagacacctacacaggcaag
gccttggcatactcattagagttctttaacactaaacatggcggccggaaacaacggaag
gtgcctcagattctcatggtgatcacagacggggatgccaccgaccatcacaaactaaag
ccgacatctgatgcactgcgagacaaccagatcaccgtcttcagtatcggagtgaaagaa
gcaatcagggaccagttggagaccatggctggtggcgacatatccaaagttttctatgtg
gacaattttgaggccttagaaactctgtacaagaatatttcttctgtcctctgcaattcc
actaagccagcttgcgagaaagataaggccgacctggtctttctactcgatcattctagc
agcatcaccagagacaattacaaaatcatgataaacttcacgaaagaagtagtgaacagc
tttaatgtcagtgaaaagtctgtgcatgttggacttgcacagttcagcgataatcctaaa
catgagtttgacctcgacaagtactccaagaaggaggatgtgatcatacacatcgacaat
atggaataccggggtggaaacacctttatcggaaaggctttggatcacattaaggattac
ttcaacacgttacggggcggccgtagtttggtccccaagaatctggtgttgataacagat
ggcgattctcatgatgacgtggaggacgcggctgatcgtgtcagggctctggggatcgag
gtgttggtcatcggtgttggagacgtccacgaccttcagctcctgcagatcactggcact
ccggagaggctgtttactgtgcagaacttcaacagcttgataaacatcaagaaaaaggtg
gtcgacaccatctgcaaaacccccacagatccccctggctgcagcatagacatcgccatg
ggttttgatatttctcgaagaactggagctcctggtgagatgctgatcagcggccacacc
aagctccagaccttcctgccagagatcgtccattacgtttcctcggtacaaggcctgtgc
tgcgtgacggaacctgtcaataccaacattgccttccaagtggtggatcgtgatggacgt
tccctgtacgacacaaactttgaagtctacaacgaagatgtggtgaagaaagtcatgacc
ctgcagatgtcggaacctacctactttaacactgccctgctgaaatccttcaacaagagg
tttgaaatgtccaacgctggtgtgaaggtgctggtgatcttcacagacggattcgatgaa
gacgtgatgaaactgaagcatgaatcagagctgctgcgacagtctggggtcagcgctctg
ctgactgtggctctggagggagtgcgtgaccccgcccagctgcagaaggtggagtttggt
cgaggattcggctacaagcttcctctcagcatcggcatgccgagcgtcggcagcaccatc
ctcaaacagattgacatggtgtcagatagggagtgctgcaacgtcatgtgcaaatgttcg
ggacatgaaggcatccatgggtctccaggcaaaccggggataaagggtgagtctggacag
aagggtcaaccaggcttcccgggagaggagggagtcattggtgagcgagggcctcctggg
ccaagtggacctcagggcctccagggctgtcctggagccagaggacagaagggctaccga
ggactttcgggcaacaggggtgaaaatggagaagacggactggacggagtcgacggagag
caggggctgacgggaccggatggcgctcgaggagagagaggacacccaggaaacccaggt
atcccaggtatcagaggggaggcggggctgaaaggacagcgaggactgagaggagatccg
ggtgaatcgggtgctgataacaccgtcccaggagccaagggagagcccgggaacccaggt
ttaccgggtccacctggaaaggacggacggccaggtgagggtggaatcgatggaaacccg
ggtccagatggaagaagaggcgcagtcggtgggaagggtgcacctggacccccgggagca
ccaggacttcggggcagcccaggtgctcctggtccacagggaaccagaggggaaaacggt
gatcgtggaccaaaaggaatgtctggctttcctggacctcagggtggaccaggactaccc
ggagatccaggattagccggacgccgtggcgctaacggacagaagggccaaccaggagat
ccgggtgttaagggtgctccgggatcacagggacccagaggacagccaggtcaggatggc
agagacggttatggaagtccaggacccaaaggtgccaagggagatccgggttttcctggt
taccctggtctgctgggcgaggacggtctgaagggaaccaaaggatatccaggacgcaaa
gggaaccgaggtcgaggggggaactcgggcaggcccggagagtcaggcgtgcctggagac
ccgggacatccaggacacagtggtcccagaggtcctcctggaggcaaaagcatggctgag
tgtgagctggtcacctacatcagagacaactgtgcatgttcccacggtcattcagagtgc
ccggcgtaccccaccgagctggtgttcggtctggacatgtccgaggacgtgacccccgca
gccttcgagaggcagcgctccgccctcctctccctgctggaggacatcaacatcgccgaa
agcaactgtccgactggcgctcgcgtcgctgtggtgggatacagcgcctacaccaagtac
ctgatccgcttccatgactaccgccgcaaaaaacagctgatcgaatctgtgaagaacatc
gccctggagaggacgtccaacactcgccagctgggggccgccatgcgctttgtgggtcag
aacgtcttcaaacgcgtccgagcaggaatcttgatgaggaaggtggcagtttttttctcc
aatgggccgtctcaggatgttaacgacatcgtcaccgccatgatggagtaccgcggcctc
aacatcgtcccggcggtcatctctctgaggaacgctccgtctgttgatcgagcattgcag
gttgatgacacaggaaactccatcttcacagtgctggggaggctgcaggacttggctgct
gacctgagcaaggtcaagaactgtgcaatctgttatgacccctgcaaacgtttagagcag
tgcgccttcatccaggacgtcccgaagcctcaggaggtcgacttggacctggtcatggtg
gtggacggctccagggaggtgcaggctgatgagtacgctggtgtccagcagctgttgggc
tctgtggtggaacagctggccgtgagcccgcagccccgccgggccggcaaccaggcccgg
gtggctgtagtccagcagagcggcacccaggctaccaaggtagagtttggcctgcaggcc
taccagaaccacgacctgatgaagaggcatctgatccagaaaatgcagcagcagagcggc
tcctctgcgctgggacagacgctggagttctccctgaaggaggtgctcctgaaggccagc
cagccccggaggaggagggcgctgctgactgtggtgggcacccagacgggttaccgggac
cgagccaagctgcactacatctcccagaaggccaagtgcgagggggtggcgatgtttgtg
gtgacggtcagcgagcgctacaaccggacgcaggtggaggagctggccagtctgcctgta
cagcagcacctgatccacgtcggcagactgaaggccgacgagcagggctacgcccagcgc
ttcatcagagtcttcctcaccgccatcaacaagggaatgaacacgtatcctcctccttca
ttaaaaaagacctgcaaccagctgacagaccaggaagaagaacagttcttaaatggtcag
gggtcggcactgctggaggaggatttgattatggatgaggtggcggagaagtttcaggag
cagacgggagtacagactcagactgctcagctggatgtcatcaacacattgaccagaagg
gaccgccagagttcgctcttaggagctaacctcaacgacacctgtttcctcagccaggat
gtcggcagctgccagaactacaccataatgtggttctttgacaacgaaaagggtaaatgc
tcccgcttctggtacagcggctgtggtggcaacgaaaatcgcttcaagtcactgaaggat
tgtgagaacctctgtctgacgaagaatccatga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (9)   

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