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KEGG   Siniperca chuatsi (mandarin fish): 122863128
Entry
122863128         CDS       T08948                                 
Symbol
cacna1da
Name
(RefSeq) calcium channel, voltage-dependent, L type, alpha 1D subunit, a isoform X1
  KO
K04851  voltage-dependent calcium channel L type alpha-1D
Organism
schu  Siniperca chuatsi (mandarin fish)
Pathway
schu04010  MAPK signaling pathway
schu04020  Calcium signaling pathway
schu04218  Cellular senescence
schu04260  Cardiac muscle contraction
schu04261  Adrenergic signaling in cardiomyocytes
schu04270  Vascular smooth muscle contraction
schu04530  Tight junction
schu04912  GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:schu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:schu04040]
    122863128 (cacna1da)
Ion channels [BR:schu04040]
 Voltage-gated cation channels
  Calcium channel, voltage-gated (Cav)
   122863128 (cacna1da)
SSDB
Motif
Pfam: Ion_trans CAC1F_C Ca_chan_IQ GPHH PKD_channel FAM176 PFF1_TM
Other DBs
NCBI-GeneID: 122863128
NCBI-ProteinID: XP_044025226
Position
LG2:17118366..17184219
AA seq 2120 aa
MSANGPAPDPAPVAPEAPPASTPAPAAAPAPAPAAPPAPPALPAPASTTIPAGALAQKKR
QQYAKSKKQGSNANSRPPRALFCLNLNNPIRRACISLVEWKPFDIFILIAIFANCMALAV
YVPFPEDDSNSTNHDLETVEYAFLIIFTIETFLKIIAYGLVMHQNAYVRNGWNMLDFVIV
VIGLFSVVLELLTKEEKTEGEGESSHPSMHGHGGKPGGFDVKALRAFRVLRPLRLVSGVP
SLQVVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFIGKMHATCFIPGSEAIAEEEPA
PCAISGHGRQCSINISECREGWQGPNNGITNFDNFLFAMLTVFQCITMEGWTDVLYWMND
AMGLELPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQLEEDL
KGYLDWITQAEDIDPDNEDEADEESKRNRVTLADLTEKKKGRFGWFSQSSDTHASVPASE
TESVNTENQNGEDEKTPCCGPLCQKISKSKFSRRWRRWNRFCRRKCRLAVKSVPFYWLVI
ILVFLNTLTISSEHYNQPLWLTQVQDVANKVLLALFTCEMLVKMYSLGLQAYFVSLFNRF
DCFVVCGGITETILVELEIMSPLGISVFRCVRLLRIFKVTRHWQSLSNLVASLLNSMKSI
ASLLLLLFLFIIIFSLLGMQVFGGKFNFDETQTKRSTFDNFPQALLTVFQILTGEDWNAV
MYDGIMAYGGPSSSGMIVCFYFIILFICGNYILLNVFLAIAVDNLADAESLNTDEGDKKG
DKKEDDKDDKDEEEDNDDTAADEEDPEVPSGPRPVISDLVKKEKITPIPEGSAFFIFSST
NPFRVFCHRLINHHIFTNLILVFIMLSSVSLAAEDPIRNFSARNIVLGYADYVFTSMFTF
EIILKMTTYGAFLHKGAFCRNYFNLLDLLVVGVSLVSFGIQSSAISVVKILRVLRVLRPL
RAINRAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMFACIGVQLFKGKFYRCTDEAKSSP
EECKGTYILYKDGDVNQPTIHKRLWSNSDFNFDNVLMAMMALFTVSTFEGWPALLYKAID
SNRENLGPIYNYRVEISIFFIIYIIIIAFFMMNIFVGFVIVTFQEQGEKEYKNCELDKNQ
RQCVEYALKARPLRRYIPKNPYQYKFWYVVNSTGFEYIMFVLIMLNTLCLAVQHYGQSAL
FNYVMDILNMVFTAVFTVEMVLKLIAFKPRHYFADAWNTFDALIVVGSVVDIAITEVNKL
VEPTETPQVDEQGNTEDSARISITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPY
VALLIAMLFFIYAVIGMQVFGKVAMVDGTHINRNNNFQTFPQAVLLLFRCATGEAWQEIM
LACMPGKLCDPESDYNPGEEMTCGSGFAIVYFITFYMLCAFLIINLFVAVIMDNFDYLTR
DWSILGPHHLDEFKRIWSEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKLCPHRVACKRLV
AMNMPLNSDGTVMFNATLFALVRTALKIKTEGNLEQANEELRAVIKKIWKRTSMKLLDQV
VPPAGDDEVTVGKFYATFLIQDYFRKFKKRKEEGLVGAHPSQNNTAIALQAGLRTLHDIG
PEIRRAISCDLQDDELVDFIPEEDEEIYRRNGGLFGNHLMNGGHRRSNGHQTNATQRPLQ
VQPPPHYAHMEQPVGRLSRANAMSHPNQHHHHHHHHHRHHNSYGKSPKSTNINLNNANMS
SLPNGGHHRYYEHAPPNGYPGLRSSYYDYDKPRTPQGQRRRYYEAYVRSHGVDGRHPTIR
REEEFDEDRFSGEYYSGEEFYEDDSMLSGDRYQNSDTEYETPKGYHHPDSYYDDDEQPLY
RDSRRSPKRRLLPATPQGNRRPSFNFECLRRQSSQDELPHQRTALPLHLMQHQVMAVAGL
DSSRAHRLSPTRSTRSWATPPATPASKDQSPYYTPLIRVDHPYRESAASSQVSVRKSSWY
TDDPEFSQRTYSPVHLQVPPEYHNQYHQKRGSATSLVEAVLISEGLGRYAKDPKFVAATK
HEIADACEMTIDEMESAASHLLNGGMAPSHNGVNVFPILTPRDYELQDTAASYSDEEPET
EQRAPYEEDLADEMICITTL
NT seq 6363 nt   +upstreamnt  +downstreamnt
atgagcgccaacgggcccgccccagacccagcccccgtggccccagaggcccctcctgcc
tcaacccctgcccctgctgcggccccagccccagcccctgcagcaccacccgctcctcct
gccctgcctgccccagcgtccactaccatcccggcaggtgcgttggcacagaagaagcgg
cagcagtatgccaaaagcaagaaacaaggcagtaatgccaacagcaggccaccgagggct
ctgttctgcctcaacctcaacaaccccatacgcagggcctgcatcagcctggtggagtgg
aagccatttgatatctttatattaattgctatttttgccaactgtatggccttagctgta
tatgtccccttccctgaagacgattccaactccacaaaccatgacttggaaacagttgag
tatgccttcctcatcattttcacaattgagacctttctgaagattatcgcttatggtttg
gtgatgcaccagaatgcatatgtgcgaaacggttggaacatgctggatttcgtcattgtc
gtcataggactcttcagtgttgtcttggagctgttgaccaaagaggagaagacagaaggc
gaaggagaaagtagccatccgtcaatgcacgggcacgggggtaaaccaggtggatttgat
gttaaagcccttcgagccttccgtgtgctgcgacccctgcggctggtctcaggagtaccc
agtttacaggtggtgttgaactccatcattaaagccatggtccctctccttcacattgcc
ctcctggtcttgtttgtcattatcatctatgctattatcggcctggagcttttcatcggt
aaaatgcacgcaacctgctttattcctggctcagaagctatagcagaagaggaaccagct
ccatgtgcgatctcagggcacgggcgccagtgctccatcaacatcagcgagtgcagagaa
ggctggcaaggtcccaacaatggcatcaccaactttgacaacttcctgtttgccatgttg
actgtgtttcagtgtatcaccatggagggctggactgacgtgctgtactggatgaacgat
gctatgggcttagagcttccatgggtgtactttgtcagtcttgtgatcttcggctccttt
ttcgtgcttaacctggttttgggtgtgttgagcggagagttctccaaggagagagagaag
gccaaagctcgtggagacttccagaagctgcgtgagaagcagcagctggaggaggatctg
aagggttacttggactggatcactcaggctgaagacatcgacccagacaacgaggatgag
gccgatgaggagagcaagcgcaatcgggtgactctggctgaccttactgagaagaagaaa
ggaaggtttgggtggttcagccagtcgtccgacactcatgcgagcgttccagccagcgaa
acagaatctgtgaacaccgagaatcaaaacggggaggatgaaaagacaccatgctgcgga
cctctgtgtcaaaaaatttcaaagtcaaagttcagtcggcgctggcgccgctggaacagg
ttttgccgcaggaagtgccggttggctgtcaaatcggtgcctttctattggctggtcatc
atcctggtgttcctcaacactctcaccatatcatcagagcattacaaccagcctttgtgg
ctgacacaagtgcaggatgtggccaacaaggtgctgctagccctgttcacatgtgaaatg
ttggtgaagatgtacagtctcgggctacaggcctattttgtttcactgttcaaccgcttt
gactgctttgtggtgtgcggaggaatcactgaaaccattctggtcgagctggaaatcatg
tcgcccctcggcatctctgtgttccgctgcgtccggctgctgaggatcttcaaggtcaca
cgtcactggcagtctctaagtaacctggtggcgtctctgctcaactccatgaagtccatc
gcttccctgctgctgctgctcttcctcttcatcatcatcttctccctgctgggcatgcag
gtgtttggtggaaagttcaactttgacgagacacagaccaagaggagtacctttgacaac
tttccccaagcccttctcacagtgtttcagatcctgactggagaagactggaacgctgtt
atgtatgatgggatcatggcgtacggaggcccttcctcttctgggatgatcgtgtgcttt
tacttcatcatcctctttatctgtggaaactatatcctcctgaatgtcttcttggctatc
gctgtggacaacttggcagatgcagagtctctcaacacagacgaaggagacaagaaaggg
gataaaaaggaggatgataaagatgacaaggatgaagaggaggacaatgatgacactgca
gcagatgaggaggatccagaagttccatcgggaccccggccagtcatctctgacctggta
aagaaggagaagatcactcctatcccggaaggaagcgccttcttcatcttcagcagcaca
aacccgtttcgtgtgttttgccacagactcatcaatcatcacatattcaccaacctcatc
ctggtgttcatcatgcttagctctgtctcactcgctgctgaggatcctatccgaaacttc
tcagctcgcaatattgtcctaggctatgcagattatgtcttcactagtatgtttacattt
gagatcatattgaagatgacgacatacggagcctttctccataaaggagcattctgtagg
aattacttcaacctcctggacctcttagtggtgggagtttcccttgtctcctttggcatc
cagtcctcagccatctcagtggtgaagattcttagggtgcttcgtgttcttcgacccctg
agggccatcaaccgagccaaaggcctaaagcatgtggtgcagtgtgtgtttgtggccatc
aggactatcggtaacatcatgatcgtcaccactctgctccagttcatgttcgcctgcata
ggggtgcagctatttaagggaaagttctatcgctgcacggatgaagccaagtccagcccg
gaagagtgcaagggcacctacatcctgtataaggatggagatgtgaaccagccaaccatc
cacaaacgactgtggagcaacagcgacttcaactttgacaacgtcctcatggctatgatg
gctctgttcactgtgtccacttttgaaggctggcctgcgttactatacaaggcaatcgac
tccaacagggagaacctcggccccatttacaactaccgtgtggagatttccatcttcttc
atcatctacatcatcatcattgctttctttatgatgaacatctttgtaggttttgtgatt
gtcacatttcaggaacaaggagagaaagagtacaaaaactgtgaactggacaagaaccag
cgtcagtgtgtggagtacgctcttaaggctcgtccactgaggaggtacatccctaagaac
ccataccagtacaagttctggtatgtggtgaactccactgggtttgagtacatcatgttt
gtgctcatcatgctcaacacactctgcttggctgtacagcactacggccagtctgcgctc
tttaactatgtaatggacattcttaatatggtcttcactgcggtcttcactgtggaaatg
gttctcaaactcatcgctttcaaacccaggcactatttcgctgatgcttggaacacattt
gatgccttaattgttgttggtagcgttgtcgatatcgctatcactgaagttaataaactt
gtagagccaacggagactcctcaggtggatgagcaggggaacacagaggacagcgctcgc
atctccatcaccttctttcgtctgtttcgtgtcatgcggctggtcaagctcctcagcaga
ggggagggcattcgcaccctgctttggactttcatcaaatccttccaggctctgccatat
gttgctcttctgatagccatgctgttcttcatctacgctgtcattggcatgcaggtgttt
ggaaaggttgccatggtggacggtacgcacatcaacagaaacaacaacttccagaccttc
cctcaggctgtgctgcttctcttcagatgtgccactggagaggcatggcaggagatcatg
ttggcctgtatgccggggaaactgtgtgacccagagtccgactacaaccccggggaagag
atgacatgtggcagtggatttgcaatagtttacttcatcaccttctacatgctctgcgcc
ttcttgattatcaatttgtttgtggccgtcatcatggacaactttgactatctaacacgt
gattggtccattcttggtccacaccacctcgatgaattcaagagaatttggtcagagtac
gacccagaggcaaagggcagaattaaacatctggatgttgtaacactccttcgtcgtatc
cagcctcctctcgggttcggcaaactgtgccctcacagagtcgcttgcaagaggctggta
gccatgaacatgcctctgaacagcgacggcacagtcatgtttaacgccactttgtttgca
ctggtgcgcaccgccctgaagatcaaaacagaaggtaatctggagcaggccaacgaggag
ctgcgagctgtcatcaagaaaatctggaagagaaccagcatgaagctgctggatcaagtg
gtgccccctgctggtgatgatgaggtaaccgtggggaagttctatgccaccttcctgata
caggactactttaggaaattcaagaaacgtaaagaggaaggcctggtgggtgctcacccc
tcccagaacaacacagctatcgctttacaggctggccttcgcacgctgcatgatattggg
cccgaaattcgccgagcgatatcatgtgatctgcaagatgacgagctagtagactttatt
ccagaggaagacgaggaaatttataggcgtaacggcggactcttcggtaaccatctcatg
aacggtggtcatcggcgatccaacggccatcagaccaacgccacacagcgacctctacag
gtgcagcctccacctcactacgcccatatggagcagccggtgggacgcctgtctcgagcc
aacgcaatgtcccaccccaaccagcaccatcaccaccaccaccatcaccaccgccaccac
aactcctacggcaagtctcccaaatccaccaacatcaacctcaacaacgccaacatgtcc
agtctgcccaatggaggacaccatcgttactatgaacatgcacctcccaatggctaccca
ggtcttcgaagctcctactatgactacgacaagcctcggacaccccagggtcaaagaagg
cgctactatgaggcctatgttaggtcccacggagtggatggacgacaccccaccatccgc
agggaggaggagtttgatgaagaccgcttctctggggagtattacagcggggaggagttt
tatgaagacgacagtatgctgtcaggggacaggtaccagaacagtgacacggagtacgag
actcccaaaggttaccatcaccctgacagttactatgacgatgacgagcagcctctctac
cgcgactcacggaggtcaccaaagagacgtctgcttcctgccactcctcaaggtaacagg
aggccatccttcaactttgagtgtctgcgcagacaaagtagccaggacgagcttccacat
cagcgtactgctctaccactgcacctcatgcagcaccaggttatggctgtagcaggcctg
gactccagcagagcccaccgcctctccccgacccgctccacccgctcctgggccactccc
cctgccacccctgccagtaaagaccagtcaccatactacacccctctcatccgtgtggac
cacccatacagggagagtgctgctagcagccaagtgtcggtgcgcaagagctcctggtac
acagacgaccccgagttctcccagaggacgtactcacctgtccacctgcaggtgccacct
gagtaccataaccagtatcaccagaagagaggcagcgccaccagccttgtggaagcggtt
ttgatatcagaagggcttgggagatatgccaaggaccccaagttcgtcgctgccacaaag
catgagatagcagatgcgtgtgagatgacaatagatgaaatggagagtgcagccagtcat
ctgctgaacggagggatggccccaagccacaatggggtcaacgtgttccccattctgact
ccaagggattatgaactgcaggacaccgcagccagctacagcgacgaggagccagagaca
gaacagagagctccttatgaggaggacctggcagacgagatgatctgcatcacaacttta
tag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (8)   
   KEGG PATHWAY (8)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (14)   
   RefSeq(pep) (14)   
DNA sequence (14)   
   RefSeq(nuc) (14)   
Protein domain (7)   
   Pfam (7)   
All databases (49)   

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