[go: up one dir, main page]
More Web Proxy on the site http://driver.im/
KEGG   Struthio camelus australis (South African ostrich): 104152564
Entry
104152564         CDS       T08512                                 
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-4(VI) chain-like
  KO
K06238  collagen type VI alpha
Organism
scam  Struthio camelus australis (South African ostrich)
Pathway
scam04510  Focal adhesion
scam04512  ECM-receptor interaction
scam04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:scam00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    104152564
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    104152564
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:scam04147]
    104152564
   00536 Glycosaminoglycan binding proteins [BR:scam00536]
    104152564
Exosome [BR:scam04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   104152564
Glycosaminoglycan binding proteins [BR:scam00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   104152564
 Hyaluronan
  Extracellular matrix or blood plasma proteins
   104152564
SSDB
Motif
Pfam: VWA VWA_2 Collagen VWA_3 Kunitz_BPTI VWA_CoxE DUF1194 C19orf12
Other DBs
NCBI-GeneID: 104152564
NCBI-ProteinID: XP_009686261
Position
Unknown
AA seq 2542 aa
MDDWKPLLILLFVTTCCSIDAQQTACRKATLADIVFLVDTSASIGQENFQKVKKFLSTLV
SSLDIGLDAVRVGLAQYSDETYQEFFLNQYLLKSDVLKQIEDLPYRRGETYTGAALDFVS
TVYFTESAGSRAKGYIPQVAVLITNGESSDEVEEPARKLRDRDISIYVVAIGVQNKAEMK
QIASKPFNKFLYSIGNFDDLQDLSTKLLGNFCFAVKSQIEAFAKKYADVIFLVDSENMTP
STFEEVKHLISQTVSHLDVGLNKYSIGLAQFSGIGHTEFLLNTYENKEEVLDHIQHSVAF
SGGSSRTGSALEFLQETFFMDGAGSRLSEGTPQVVVVITPSGSRDSITAAAWALEEMGVK
VVSVDVGNSDREEAKVRVPSTMAYQIYEGESIDLVWQNIVSDMEASIQKLYDLDASVPAV
CSSATIADIVFLVEESSKIGAKNFQLIRAFLLKIVNALDIGPDNVRVGLVLYSNEPRLEF
SLNTFKDKSEILNYLKNLPYQGGQTYTGVAIEFLRKKVFTQEAGSREKQGVQQIAVVITN
GQSLDDYTEPASKLRRKGVTVYAVGIQNITENSKLDKIATYPPRKHVFSLKFFLQLSNIG
WKIKKRLCNEIVTKTFVVPLQLRSLKEGCVDTEEADIYFLIDGSGSIYPSDFEDMKTFMN
EMIRMFQVGASSVRFGVVQYSDEPRTEFMIGQHNQMTRLTQAIRNINQIGGGTRTGNALR
SMKSLFRMAARENVPQILIVITDGKSQDKVNQAAKELRQQEIVIYAIGVKEAVQKELAEI
AETKDRIFFVNNFDSLKLIKHDIVRDICSANVCKNMRADIVFLVDSSESIRPAEFQKVKD
FMQSFVTKVDVGLDNVRIGLLQFSSEMREEFQLDRYNTMTDLQRAIQEVQQIKSGTLTGK
ALTFAASYFDQSRGGRPELKQYLIVITDGESQDPVKTPARAIRDKGIAIYAIDMLQANNS
QLVEITGTQDKVFFENDLNFLEKQILFEICNVESLCKRAEVADIMFVVHGSSGITDLQFQ
NVQHLMEAIVNDSMVGVDKVQFGVLVYSSKQEVHFSLNSYFSKSQIREAIFNLKPLPGQP
FTARALSFARQRFGMSYGGRASSLAVSRILILITDEPTVPSDRVNLPAAARALKDDGIDL
VAVGVNTASRAELQEVTGDQERLFFAQSYDSLENIHENLMQIVCEKSQPVCSNQVADLVF
LMDGSESISKSNFSIMKTFMKEIVDSFVISKDKVHVGVVQYSQDPQKEFSLNDFYTDTII
KEQIDSIEQLQSSTFTGKGLRFVRSLFEPANGGRNNQGVSQNLVVITDGYSADKVEDAAQ
ALRSDGIHISAVGIGIINSFELLQIAGDERRVYTVENFDALKAIKRNIVDEVCESGDPPS
QDCNIDLSIGIDISGRIRPVSTLLLKQKLQAFLPKLLLQMKSLPSVSCNVGSPVNVKFKF
QVLVWTNQFIFDSDLEDYNEEIIQKFLDAQTTVDTYLNANILQTLWEKFFSVTSAKVKVL
LLFSDGLDDSLENLRKAVNSLRLKGLDALLIVGVDSTQNLTELREIEFGRGFGYSEPLSV
GFADIESILQRNLDIIAERKCCNVVCKCLGENGDHGNQGHPGTKGSTGYRGSPGHPGEEG
GIGERGPVGFNGTQGERGCSGARGHKGSRGYRGSQGEYGESGFDGTDGEQGEHGSPGPSG
EKGRPGKRGRKGSTGESGERGETGLRGDRGDPGISNNVPGPMGEKGNPAQQGDPGPQGLQ
GEQGDAGADGAEGRRGPPGIKGEQGDLGESGYPGDPGLPGPQGPRGPQGIRGPPGPQGMP
GSLASLGPPGPPGSVGKQGARGAKGEPGDPGEKGIVGPAGQRGMPGMDGRDVYGPEGSKG
AKGQSGFIGYPGPEGEEGDPGIPGAEGPKGVRGRRGNAGTPGSVGDVGDQGPPGPMGTKG
PRGTITMEPCELVNFTRENCPCSSDTDTCPVYPTEVVFALDMSEDVTPAAFERMRNIVMS
LLRTIKISASNCPTGARVSIVSFNTNTRYLIRFSEFQKSNLLLQAVQRVPLERSTGKRNI
GAAMRFVARNVFKRVRQGILTRRVAIFFANGPSQDDTVISTAALELSALDIIPVVIAFSE
VPNVRRAFSIDDTRRFQLFVWERQQSESLESITYCTLCYDKCKPSTNCEVPIPPPVLVDM
DITYIMDSSCSISSEEFQRAKDFVSNMLDQFVIASQPSESYGGTRVALVQQAPRGELPDR
SQSPVALEFDLVTYNNKDLMKKHIQESVQQLEGPSTIASALQWTVENVFFKAPRQRKHRV
IFTIVGSKTSMWDRERLREISLGAKCQGFTLFTLALGNDVSESELIELSSCPVDQHLLSL
GRVSTSEMAYAQRFSRAFLNLLQQEINSYPSPELQEECESLDRGDTQQQVSAIERVPFPG
SDEASYSHDLEEVETTENRVLEKVITTTTEPVYTLPKMRYGYGKNEYFTQEDSKEKKSQK
YGDAQKENEENLEATVETRAAYKDYDVCDLLQDSGECQDXVLKWYYNKGQKTCGQLWYXG
CGGNKNRFETQEECKVLCIESS
NT seq 7629 nt   +upstreamnt  +downstreamnt
atggatgactggaaaccacttcttattcttctctttgtaaccacctgctgctctatagat
gcacagcagactgcttgcagaaaagccactttggcagacattgtctttctagtggataca
tcagcaagcattggccaggaaaactttcagaaggtgaagaaattcctctccactttggtt
tcaagccttgacattggccttgatgcagtccgagttgggctggcacagtacagtgatgag
acttaccaagagttctttctgaatcaatatttgctgaaaagtgacgttctgaagcagatt
gaggatttgccatataggaggggagaaacttacacaggtgcagctctggattttgtcagc
accgtgtatttcactgaatctgctggtagcagagctaagggttacatcccacaggtagcc
gttctaatcaccaatggagaatccagtgatgaagtcgaagagcctgccaggaaactgaga
gacagagacatctctatctatgtggttgcaattggtgtccagaataaagctgagatgaag
caaatagccagcaaaccttttaataaatttctgtatagcattggtaattttgatgatctt
caagacctctccacaaaacttttgggaaacttctgctttgcagttaaaagccaaatagaa
gcatttgcaaaaaaatatgctgatgttattttccttgttgactctgagaatatgacgcct
tcaacttttgaggaagtgaaacatttaatctcccagacagtcagccatctagatgttggg
cttaacaagtacagcattggcctagcccagtttagtgggataggacacactgagtttttg
ctgaacacgtatgaaaataaagaagaggtacttgaccacattcagcatagtgttgcattt
tctggaggctcctcgaggactggaagtgccctggagttcttgcaggaaacctttttcatg
gatggtgctggaagccgactcagtgaaggcactccacaagttgtagtggtcatcacaccc
tccggatccagagacagtatcacggcagcagcttgggcgttagaagagatgggggtaaaa
gttgtctcagttgatgttggaaactctgatagggaagaagcaaaggtgagagttccctcc
accatggcttaccagatttatgaaggagaaagtattgatctcgtgtggcaaaacattgtc
agtgatatggaagcctccattcagaagctttatgacctcgatgcaagtgtgccagcagtg
tgttccagtgcgactattgcagatattgtgtttcttgtggaagaatccagcaaaattggg
gcaaaaaacttccagctcattagggcttttctgttaaaaattgttaatgccctggatatt
ggcccagacaatgtaagagttggattagtactatacagtaatgaaccaaggctagagttc
agcctgaacacattcaaggacaaatcagaaatcctgaactatctgaagaacttaccatat
caaggcgggcaaacatacactggagtagctattgaattcctgaggaagaaggtttttact
caagaagcaggtagcagggaaaaacaaggagtgcagcaaatcgctgttgttatcactaat
ggccaatccttggatgattacactgaaccagcatctaaactaaggcgtaaaggtgttact
gtctatgctgtgggcatccagaatatcacagagaatagcaagctcgataaaattgcaact
tatcccccaaggaagcacgtcttcagcctgaagttttttctacagctgtcaaatattgga
tggaaaataaaaaaacgactttgtaatgagattgtgacaaaaacttttgtagtcccatta
caattgcggagtctgaaagaaggttgtgtagacacagaggaagctgacatttatttcttg
attgatggctctggcagcatatatccatctgatttcgaggacatgaaaacattcatgaat
gagatgatcaggatgtttcaagttggtgccagcagtgttcgctttggcgtggttcagtat
tcagacgagccgaggacagagttcatgattggccagcataaccaaatgacgaggttaaca
caggcaattaggaatatcaatcaaataggtggaggcacccgaactggaaatgctttaagg
tctatgaagagtctattcagaatggctgccagggaaaatgttccacagatccttatagta
attacagatggaaaatcccaagataaggtgaatcaggcagcaaaagaattgaggcaacaa
gaaattgttatatatgccattggtgttaaggaggctgttcaaaaagagctggcagaaata
gcagagacaaaagacagaatattttttgtgaacaactttgattccctgaagcttattaaa
catgacattgtgcgagatatctgttcagcaaatgtctgcaagaatatgagagctgacatt
gttttcctggtggacagctcagagagtattcgtccagctgagtttcagaaggtgaaggat
ttcatgcagtcatttgtgaccaaagtggacgttgggcttgataatgttcgaatcggcttg
ctgcaattcagctctgaaatgagagaagagttccagcttgacagatataacaccatgact
gatctgcagagagccattcaggaagtgcagcagattaaatcaggaacacttactgggaaa
gcgctgacctttgctgcctcttactttgaccagtctaggggagggcgtcctgaattaaaa
cagtacctaatagtgatcactgatggggaatcccaagatccagtgaaaaccccagccagg
gccatacgggacaaaggtatcgccatctatgccattgacatgctccaggcaaacaattcc
cagcttgtggagatcactggcactcaagacaaagtattctttgagaatgaccttaacttc
ctggaaaagcagattctctttgaaatttgcaatgtagaaagtttgtgcaaaagggcagaa
gttgccgatatcatgtttgtagtgcatggatcatctggcattacagacctgcagttccag
aacgtgcagcatctcatggaagcaatagtcaatgactcaatggttggagtggacaaagtt
cagtttggtgttttggtgtatagctccaagcaggaggtgcatttctcactgaattcatac
ttctccaagtctcagatcagagaagcaatattcaacttgaagcctctgccaggccagccc
ttcacagcaagggctttgagctttgccaggcaaagatttggtatgagctatggtggacgt
gcatcttctcttgctgtctccaggatcctcattcttattactgatgaaccaactgtacca
tcggatagagtcaaccttcctgcagctgcaagagctttgaaggatgatggaatcgattta
gttgctgttggagtgaacacagcaagcagagcagagcttcaagaggttactggagatcaa
gaacgattattctttgcacaaagctatgattcactggaaaacatacacgaaaatcttatg
cagatagtgtgtgagaaatctcagccagtttgcagcaatcaagtagcagatctggtattc
ttgatggatgggtcagaaagtatatcaaaaagtaacttttctatcatgaagacgttcatg
aaggaaattgtggacagttttgttatttcaaaggacaaagtacatgttggggtagtccag
tacagccaagacccccaaaaagaattttctcttaatgacttctatactgacaccatcata
aaggaacagatcgacagcattgagcagttgcagtcctctacattcactggcaaagggctg
aggtttgtccggagcctttttgagcctgccaatggaggccgcaataaccaaggagtctca
cagaaccttgttgtgattacagacgggtactctgctgacaaggtggaggatgcagcacaa
gctttgaggagcgatgggatacatatctctgcagttggcatagggattataaattctttt
gagctgcttcaaatagcaggtgatgaaaggagagtgtacacagtggagaactttgatgca
ttgaaagctatcaagaggaatattgttgatgaggtctgtgaatctggagatcctcctagc
caggactgcaacatagatctttctataggaattgatatttcagggcgcatacgaccagta
tccacactgcttctgaaacagaaattacaagcgtttctccccaagcttttactccagatg
aaatcactgccaagtgtcagttgtaatgttggctctccagtcaacgttaagttcaagttc
caagtgctggtgtggaccaaccaattcatctttgactctgacttggaagactataatgaa
gagatcatccagaagttcttagatgcacagaccactgtagacacctaccttaatgcaaac
atcttacaaaccctttgggagaagttctttagtgtgacctctgctaaagtgaaggttctg
ttactattttccgatgggctggatgattcactggaaaatctaagaaaagcagtcaactcc
cttcgcctcaaagggcttgatgcacttttaatagttggtgtggacagtacacagaacttg
actgaacttcgggaaatagagtttggcagagggtttggatacagcgaacctctgagtgtt
ggatttgcagatattgaaagcatcttgcagagaaaccttgatattattgcagaaaggaaa
tgctgtaatgttgtttgtaaatgccttggagaaaacggtgatcacggcaaccagggacac
cctggaaccaagggaagtacaggttacagaggatctcctggccatcctggtgaggagggt
gggattggagagagaggtccagtcggtttcaatgggactcaaggagagaggggatgttca
ggtgccagaggtcataaggggtccagaggctatcggggaagccagggtgaatatggtgag
agtggatttgatggcactgatggagaacagggagaacatggatctcctggtccttctggt
gagaaaggcaggccaggaaaacggggtagaaaaggctccacaggagaatcgggtgagcga
ggagagactggtctaagaggagatcgtggggatcctgggattagcaataatgttcccggt
cctatgggtgaaaaagggaacccagcacagcagggggatccaggaccacaaggactccaa
ggagagcagggtgatgctggtgctgatggtgcagaaggtcgaagagggcctccgggcata
aagggtgaacaaggagatctgggggaatcaggttacccaggagatcctggtttgccaggc
ccacagggcccaagaggaccacaaggtatcagaggacctccaggaccacaaggcatgcca
ggctctctggctagtctaggacccccaggtcctcctggctctgttgggaagcaaggtgca
agaggagcaaagggtgagcctggtgaccccggagagaagggtattgtgggaccagctgga
cagagaggcatgcctggcatggatggcagagatgtctatggtcctgaagggagcaaagga
gcaaagggacaatctggattcatcggctatcctggtccagagggagaagagggagaccca
ggtatcccaggagctgaaggacccaaaggagttaggggtagaaggggaaatgctggcaca
ccgggttctgttggagatgtgggggaccaagggccaccaggacctatgggtaccaaggga
ccaaggggcaccattacaatggaaccttgtgaacttgtgaattttacacgagaaaactgc
ccttgctcatcagatacagacacatgtccagtttatccaactgaagtggtgtttgccctt
gatatgtctgaagatgttactccagcagcgtttgaaagaatgaggaacattgtcatgtct
ttgcttaggacaattaagatcagtgcaagcaactgcccaacaggcgctcgtgtctccatt
gtttctttcaataccaacacgcgctatctcatccgattctcagaattccaaaagagcaac
ttgctactgcaagcagtccagagagtaccactagagagatccactggaaaacgtaatatt
ggggcagccatgaggtttgttgcaaggaatgtctttaaacgggttcgtcagggcatcctc
acaagaagagttgccatattttttgccaatggtccatcgcaggatgatactgtcatcagc
acagctgcacttgagttaagtgccttggatatcattccagtggttattgccttcagtgaa
gtgccaaatgtcaggcgtgccttctcaattgatgatactagaagatttcagttatttgtt
tgggaaagacaacaaagtgaaagtttggagagcatcacatattgtactctttgctatgat
aaatgcaaaccaagtaccaactgtgaggtgcccattcctcctcctgttctggtggatatg
gatatcacttacatcatggacagctcttgcagcatcagcagtgaagagtttcagagagcc
aaagactttgtgagcaacatgctagatcagtttgtcattgcctcacagccaagcgagtcg
tatggaggcaccagagtggcactggtgcaacaggctcccagaggcgagctgcctgacaga
agccaaagccccgtggccctggagtttgatctagtcacatacaacaataaagatttgatg
aagaaacatatccaagagtccgttcagcaattggaaggaccatccaccattgcttctgca
ttacagtggacagttgaaaacgtattttttaaagcccccagacagagaaagcacagggtc
atatttacaatagttggaagcaaaacaagcatgtgggacagagagaggctgagagagatt
tcacttggggctaagtgccaaggattcaccttgttcactctagcgcttggcaatgatgtg
agtgagagtgagctgatagagctgtcaagctgccccgtagaccagcacttactgtctttg
ggcagagtttcaacatctgagatggcatatgctcagaggtttagccgggcattcctaaat
ctcctacaacaggaaataaacagttatccttctcctgaacttcaagaagagtgtgaaagc
ttagatcggggagacacgcaacagcaagtatctgcgattgaaagggtgccttttcctggc
tcagatgaagctagttacagtcatgatttggaagaagttgaaacaactgaaaatagagtc
ctggagaaagttataacaactaccacagaacctgtatacacattgccaaaaatgagatat
ggttatgggaagaatgagtatttcacgcaggaagattctaaagaaaaaaagtcacaaaag
tatggagacgctcagaaggagaatgaggaaaacttagaggcaacagtagaaactagagct
gcttataaggattatgatgtgtgtgacctgcttcaggacagcggagaatgtcaagattaa
gttctgaagtggtactacaacaaagggcagaaaacgtgtggtcagctttggtatnggggc
tgtggaggcaacaaaaatagatttgaaacacaagaagagtgtaaagtcttgtgtatagaa
tcttcctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (20)   

Download RDF
DBGET integrated database retrieval system