[go: up one dir, main page]
More Web Proxy on the site http://driver.im/
KEGG   Syngnathoides biaculeatus (alligator pipefish): 133500785
Entry
133500785         CDS       T09681                                 
Symbol
rxrbb
Name
(RefSeq) retinoic acid receptor RXR-beta-B isoform X1
  KO
K08524  retinoid X receptor alpha
Organism
sbia  Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03320  PPAR signaling pathway
sbia04148  Efferocytosis
sbia04920  Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:sbia00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    133500785 (rxrbb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:sbia03000]
    133500785 (rxrbb)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:sbia03310]
    133500785 (rxrbb)
Transcription factors [BR:sbia03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    133500785 (rxrbb)
Nuclear receptors [BR:sbia03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   133500785 (rxrbb)
SSDB
Motif
Pfam: Hormone_recep zf-C4 Nuc_recep-AF1
Other DBs
NCBI-GeneID: 133500785
NCBI-ProteinID: XP_061675899
Position
5:complement(4127124..4137493)
AA seq 421 aa
MSSQQPNSSAPNSPTNVIGSPFSVNSPMVSPSLGFGPISHTQLSASGAMSGMHSISSSED
IKPPFGLRPMSAHSPGIMLSQKRLCVICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLSYT
CRDNKECLVDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRNREREGELEFSMGINEEMP
VEKILEAETAVEQKTELHSDGGSAGNSPHDAVTNICQTADKQLFALVEWAKRIPHFCELP
LDDQVILLRAGWNELLIASFSHRSIALKDGVLLTSELQRDGAHSAGVGAIFDRESVQSAE
VGAIFDRVLTELVNKMRDMQMDKTELGCLRAIVLFNPDAKGLSNTGEVELLREKVYASLE
AYCKNKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQL
A
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgtcttcccagcagcccaacagctcggcccccaacagtcccaccaatgtcatcgggtcg
ccgttctcggtcaactctccaatggtgtccccctctctcggatttggacccatcagccac
acccagctctcagcttcaggcgccatgtcagggatgcattcaatcagcagctccgaggac
atcaagcccccgttcggcctgaggcccatgtctgcgcacagcccgggaatcatgttgtct
cagaagcgcctgtgtgtcatctgtggagatcgctcgtctggcaagcactacggcgtgtac
agttgcgagggctgcaaaggttttttcaagaggacggtccgcaaagacttgagctacacg
tgcagggacaacaaggagtgcctggtggacaaacgccagcgcaaccgctgccagtactgc
cgctaccagaagtgcctggccatgggcatgaagagggaagccgttcaagaggagcgccag
aggaaccgcgagcgggagggcgagctggagttcagcatgggcattaacgaggagatgcca
gtggagaagatcttggaggcggagaccgcggtggagcagaagactgagctccattcggac
ggaggctctgcgggcaactctccccacgacgcggtcaccaacatctgccagacggcagac
aagcagctcttcgccctggtggagtgggccaagaggatccctcacttctgtgagctgccc
ctcgacgaccaggtcatcctcctgcgtgcaggttggaacgagctcctcatcgcctccttc
tcccaccgctccattgccctgaaggacggcgttctgctcacctcggagctgcagcgtgac
ggcgctcacagcgcgggagtcggcgcaatcttcgacagggagagtgtgcagagtgcagag
gttggtgccatatttgacagggttctcaccgagctcgtcaacaaaatgagagatatgcaa
atggacaagacggagctgggctgccttcgtgcaatcgtcctcttcaacccagatgctaaa
ggtctgtccaacacgggggaggtggagctgctccgagagaaggtctacgcgtcgttggag
gcttactgcaaaaacaaatatcccgagcagcagggcaggttcgccaagctgctcctgcgc
ctgcccgcgctgcgctccatcggcctgaagtgcctggagcacctgttcttcttcaagctg
atcggcgacacgcccattgacactttcctcatggagatgcttgaagctcctcatcagctg
gcctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system