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KEGG   Salmo salar (Atlantic salmon): 106599103
Entry
106599103         CDS       T04363                                 
Name
(RefSeq) retinoic acid receptor RXR-gamma-A-like
  KO
K08524  retinoid X receptor alpha
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa03320  PPAR signaling pathway
sasa04148  Efferocytosis
sasa04920  Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    106599103
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:sasa03000]
    106599103
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:sasa03310]
    106599103
Transcription factors [BR:sasa03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    106599103
Nuclear receptors [BR:sasa03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   106599103
SSDB
Motif
Pfam: Hormone_recep Nuc_recep-AF1 zf-C4 tRNA_bind_3
Other DBs
NCBI-GeneID: 106599103
NCBI-ProteinID: XP_014045641
UniProt: A0A1S3R1B0
Position
ssa03:complement(15076653..15099785)
AA seq 449 aa
MVGPPHHHPYHHHHHHHHHHHPSIISASVNPGQPLPSPMSTLGSPFNGQGGSPYSVITSS
SLGSPGVSIPPTPTMGFSTLSSPQMNSLNNVSSSEDIKPPPGLAGLGHMNSYGCMSPGSM
SKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLSYTCRDSKQCLIDKRQRNRCQYC
RYQKCLAMGMKREAVQEERQRGREKSDNEVESTSSFNEDMPVEKILDAELAIEPKTEAYM
EASAGNSKNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASF
SHRSVTVKDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKMKDMQMDKTELGCLRAI
VLFNPDAKGLSNPTEVEALREKVYASLESYTKHRYPEQPGRFAKLLLRLPALRSIGLKCL
EHLFFFKLIGDTPIDTFLMEMLEAPHQIT
NT seq 1350 nt   +upstreamnt  +downstreamnt
atggtggggccccctcaccaccacccctatcatcaccaccatcatcatcatcatcatcac
cacccctccatcatcagtgcctctgtcaaccccgggcagcccctcccgtctcccatgagc
accctgggctcaccgttcaacgggcagggcggctcgccgtactccgtcatcacctcgtcc
tctctgggctccccaggtgtctccatcccccctactcccaccatgggcttcagcacgctc
tccagcccacagatgaactctctgaacaatgtgagcagcagtgaggacatcaagcctcct
ccaggcctagctggactgggtcacatgaacagctacggctgcatgagcccagggtccatg
tccaagcacatctgtgccatctgtggggaccgatcctcagggaaacactatggcgtgtac
agctgtgaaggctgcaagggcttcttcaagagaaccatcaggaaggatctcagctacacg
tgtcgagacagcaagcagtgcctgatcgacaagcgccagcgcaaccgctgccaatactgc
cgctatcagaagtgtctggctatgggcatgaaaagagaagcggtgcaggaggagcgtcag
cggggccgggagaagagtgataacgaggtggagtcgaccagtagttttaacgaggacatg
cctgttgagaagatactggacgcggagctggctatcgaacccaagactgaagcctacatg
gaggcgagcgcaggcaactctaagaacgacccggtcaccaacatctgccaggcagcagac
aagcagctgttcaccctggtggagtgggccaagaggatcccccatttctctgagctgccc
ctggacgaccaggtcatcttattacgggcaggttggaatgagctgctcattgcctcgttc
tcccaccgctctgtgacagtgaaggatggtatcctattggccacggggctccacgtacac
cgcagcagtgcccacagtgccggggtgggctccatctttgacagggtgctgacggagctg
gtgtctaagatgaaagacatgcagatggacaagactgagctgggctgcctccgagccatt
gtcctcttcaacccagatgccaagggcctgtctaatcctacagaggtggaggccctgaga
gagaaggtgtacgcctcactggagtcctacactaaacacagatatccggagcagcctggc
agatttgccaagctgttgctgcgtttgcctgcactacgctccattggcctcaagtgtctg
gagcacctcttcttcttcaagctgataggagatacgcccatagatactttcctcatggaa
atgctcgaagcgccgcaccagatcacatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (7)   
   UniProt (1)   
   RefSeq(pep) (6)   
DNA sequence (8)   
   RefSeq(nuc) (6)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (53)   

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