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KEGG   Salmo salar (Atlantic salmon): 106585776
Entry
106585776         CDS       T04363                                 
Symbol
rxra
Name
(RefSeq) retinoid X receptor alpha
  KO
K08524  retinoid X receptor alpha
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa03320  PPAR signaling pathway
sasa04148  Efferocytosis
sasa04920  Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    106585776 (rxra)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:sasa03000]
    106585776 (rxra)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:sasa03310]
    106585776 (rxra)
Transcription factors [BR:sasa03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    106585776 (rxra)
Nuclear receptors [BR:sasa03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   106585776 (rxra)
SSDB
Motif
Pfam: Hormone_recep zf-C4 Nuc_recep-AF1
Other DBs
NCBI-GeneID: 106585776
NCBI-ProteinID: XP_014027854
UniProt: A0A1S3PKF7
Position
ssa24:33054252..33097663
AA seq 511 aa
METKPFLSFGFLKSQCSVAPPPQRWCPGETGGSPTACLCQTGICPLHQHRRPTAPSGQLS
SPSLSSHHAHRGMGAHPLHPSLLIPSSVSSSGPPHSPICTLSSPITSLALPFSVSSRPAG
HHSTSSSMGFSPQLSFPVISSSSSIISTEDIKPPLGQNRVLKVPAQPTCTCLSLNKHICA
ICGDRASGKHYGVYSCEGCKGFFKRTVRKELTYTCRDNKDCLIDKRQRNRCQYCRYQKCL
AMGMKREAVQDERQRAKEKSESEADSLGCANEDMPVERIEEAELAVEPKTKTYIKGSLGV
PTNSPNDPVTNICQATDKQLFTLVEWAKMIPHFSELALDDQVILLRAGWNELLIASFSHR
SITVNDSILLANGLQVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDRSELGCLRAIVLF
NPDSKGLSNPGEVEALREGVYASLEAYSKHKYPDQPGRFAKLLLRLPALRSIGLKFLEHL
FFFKLIGDTPVDTFLMEMLEAPHQMTKQHCS
NT seq 1536 nt   +upstreamnt  +downstreamnt
atggaaaccaaaccattcctttcttttggcttcctcaagagccaatgctcggtagcccca
cctcctcagcgatggtgcccgggggagacaggcggctcgcccacagcatgcttgtgccaa
acaggcatttgcccacttcaccagcacaggagacccacagccccctccggtcagctgtcc
tcaccatcgctcagctcacaccacgcccataggggaatgggtgctcaccccttgcaccca
tctttgctcatcccgtcctctgtgagctcctcaggccctccacactcacccatctgcacc
ctgagctcgcccatcaccagcctggctttgcccttttctgtcagcagccgtccagcggga
caccactctacctcctccagcatgggcttcagcccgcagctcagcttcccagtgatctcc
agtagcagcagcattatcagcacagaggacatcaaacccccactgggccaaaacagagtg
ctaaaggttcctgctcagcccacatgcacctgtctctcccttaacaaacacatctgtgcc
atctgtggagaccgcgcctcaggtaaacactatggagtatatagctgtgaaggttgcaag
ggcttcttcaagagaacagtgaggaaagagctgacgtacacctgtcgagacaacaaggac
tgtctgattgacaagcgccaacgcaaccgatgtcagtactgccgctaccagaagtgtctg
gccatgggcatgaagagagaagctgtgcaggacgagcgccagagagccaaggagaagagt
gagagtgaggcggactcgttaggttgtgctaacgaggacatgcctgtggagaggatagag
gaggcggagctcgctgtggagccaaagaccaagacatacatcaaggggagcctgggcgtg
cccaccaactcacccaacgaccctgtgaccaatatatgccaggcaacagacaagcagctc
tttaccttggtggagtgggccaagatgatcccccacttctcagagctggctctggacgac
caggtcatcctcctaagagcagggtggaatgagctcctcatagcttctttctcccatcgc
tccatcactgtgaacgacagcattctgctggcaaacggactccaagtgcatcgcaacagc
gcccacagtgcaggggtgggggccatctttgacagagtgctgactgagctggtgtctaaa
atgcgagacatgcagatggacaggtctgagttagggtgccttcgagccatcgttctcttc
aacccagactccaaaggcttgtcaaacccaggggaggttgaggctctcagagaaggggtg
tatgcttcactggaggcgtactctaaacacaaataccctgatcaaccaggaagatttgcc
aaactgttacttcgattgccagccctacgttccattggcctcaagtttctggagcacctg
ttcttcttcaaactgataggggatacacccgttgacacattcctcatggaaatgttggaa
gctccacaccaaatgacgaaacagcactgcagttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (37)   
   KEGG ORTHOLOGY (1)   
   RefGene (33)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (52)   

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