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KEGG   Sinocyclocheilus anshuiensis: 107677507
Entry
107677507         CDS       T04917                                 
Name
(RefSeq) collagen alpha-1(VI) chain-like
  KO
K06238  collagen type VI alpha
Organism
sanh  Sinocyclocheilus anshuiensis
Pathway
sanh04510  Focal adhesion
sanh04512  ECM-receptor interaction
sanh04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:sanh00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    107677507
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    107677507
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sanh04147]
    107677507
   00536 Glycosaminoglycan binding proteins [BR:sanh00536]
    107677507
Exosome [BR:sanh04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   107677507
Glycosaminoglycan binding proteins [BR:sanh00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   107677507
 Hyaluronan
  Extracellular matrix or blood plasma proteins
   107677507
SSDB
Motif
Pfam: VWA Collagen VWA_2 VWA_3 VWA_CoxE
Other DBs
NCBI-GeneID: 107677507
NCBI-ProteinID: XP_016327918
Position
Unknown
AA seq 1007 aa
MALNGYILTALCALWGGIIAQDVQLISFRECPVDLFFVLDTSESVALRAKPPEFYINQIK
AFTKLFIDQLINLPQPCDRNVTWNSGALHYSDDTELVMGLVDLNTRRLDLKAAIDKIKYI
GKGTYTDCAIKEGISELLRTGSHYHENKYIVVVTDGHPVTGYKEPCGGIQEAANEARQHA
IKVFAVAISPDQEDTRLSVIATDANYRQNFTAADNSRSTQMSTISTIIDLITNETKDVCC
SFDCNAPGGPLGLPGDPGQRGEDGRPGMPGEKGDVGAPGNVGDPGPIGYQGMKGDQGIRG
DKGERGHKGFKGDKGQHGLDGVDGRKGEAGFTGLPGCKGSPGPDGLQGEPGPKGDPGQYG
PKGERGDPGKDGEPGRPGNYGSSGPKGDGGPRGANGDKGERGDDGLQGPDGTRGDRGTPG
EKGEQGSRGNRGPRGDPGEPGPRGEQGREGSAGPNGDPGEPGRAGSPGYRGDEGATGPEG
AKGPRGIKGAPGDRGLMGERGEDGPPGNGTEGCHGFQGYPGPRGDQGAPGGKGTPGPKGD
DGEPGDPGSDNNRPGPPGPKGAKGHRGSEGSSGPPGPPGPQGADECEILDIIMKMCSCCE
CKCGPLDIVFIVDSSESIGASNFAIAKDFIVTVMDRLKLKQFGANESRIGVVQYSGANAQ
EVVQLGDPNIKTLTDLKQAVKDLRWLAEATYTGEALQYSLNNMINKLVTERSVVIILTDG
RSDTKRDTVPLNVLCGKGLKVGGVGVTDYAERKPNPEQLEEVVCKDDPREGFSFVLNNFG
LLLDDSFLQNLTERICEDKKCPTYTCPISFNDNTDVLIMMDSSASVGSKNFEMTKEFAQM
LAKRFLSAERGGFQVRVGVGQYSNNANFEAEFSSNTTQVGAQITEAKFQNAGTQVTNALN
FAIERFRGGRTRKKKLLVFSDGRSQGVNNIQIEKSMEQVSNAGIELYVLAVGNQVNEVHL
RTLVSRGRPYDNIYANRHLFKVPDYRSLVTGVFYQTVSRKISLESRG
NT seq 3024 nt   +upstreamnt  +downstreamnt
atggcgcttaatggatatatattgaccgctctgtgcgcactttggggagggatcatcgct
caggatgtccaacttatctcattcagagagtgtcctgtggacttgttctttgtgttggac
acgtctgaaagtgtggccctcagagccaaacctccagagttttacatcaaccagatcaag
gccttcacaaagctgttcattgatcagctaataaacctaccacagccatgtgatcgtaat
gtgacgtggaattctggagctctgcattacagtgacgacactgagctggtgatgggacta
gttgacctgaacacaaggcgtctcgacctgaaggcagccatagacaaaatcaaatacatt
ggaaaaggaacgtacaccgactgtgccatcaaggagggtatctctgagctgctccggacg
ggctcccattatcatgagaataagtacatagtggtggtcacggatggtcaccctgtgacc
ggctacaaggagccatgtggtgggatccaagaggctgccaatgaggcacgacaacatgct
atcaaagtgttcgctgtggccatctcacctgaccaggaggacaccagactctctgtcatt
gccacagatgcgaactatagacagaacttcaccgctgcagacaactcccgctccacgcaa
atgagcactataagcaccatcatcgacctgatcacaaacgaaacaaaggatgtgtgctgc
tcctttgactgcaacgctcctggaggccctctgggactccctggtgatccaggacaaaga
ggagaggatggaagaccaggcatgccaggagagaaaggagatgttggtgctccgggaaat
gttggtgatcctggtcctatcggttaccaaggaatgaagggagaccaaggaataagaggt
gataagggagagagaggtcataaaggcttcaagggagacaaaggtcaacatggtcttgat
ggtgttgatggacgtaagggtgaggcgggattcactggccttccaggctgcaaagggtca
ccggggccagatggcttgcaaggagaaccaggtcctaaaggagaccccggccaatatgga
cccaaaggagaaagaggagatcctggcaaagacggtgaaccaggaagacctggaaactat
gggtcttcagggccgaagggagacgggggtcctcgtggagccaatggcgataaaggcgag
cgaggagatgacggactacaaggaccagatggcacaagaggagacagaggcacacctggt
gagaaaggtgaacaaggttcccgtggtaacagagggcccagaggcgaccctggtgaacct
gggccccggggtgaacaaggacgtgaggggtcagcagggccaaacggagatccgggtgag
ccaggaagggcggggtccccaggttaccgtggtgatgaaggtgctactgggccagaggga
gctaaagggcccagaggaatcaaaggggccccaggagacagaggcctgatgggagagagg
ggtgaagatggaccaccaggaaatggaacagagggctgccatggtttccagggttatcct
gggcccaggggagatcaaggagcacctggtggaaaaggaacccctggacccaagggagat
gatggagagccaggtgaccctggatcagataataacagaccaggaccacctgggcctaaa
ggagccaaaggtcacagaggatctgaaggaagttctggaccaccaggaccacctgggcca
caaggagctgatgaatgtgagattctggatatcatcatgaagatgtgctcttgctgtgaa
tgcaaatgtggacccctggacattgtcttcattgtggacagctctgagagtattggagct
tctaactttgccatcgctaaagacttcattgtgacggtaatggacagactcaagttaaaa
cagtttggtgccaatgagtctcgtattggcgtggtgcagtacagcggtgccaatgctcag
gaggtcgtacagcttggtgaccccaacattaagaccttgacagacctaaaacaagctgtg
aaagacttgcgctggctggctgaagccacatacactggagaagctctgcagtactcgcta
aacaacatgattaacaagcttgtgacggagaggagtgtggtcattatccttactgatgga
cgttctgacaccaaaagagacactgtgcccctaaacgtgctgtgcggcaagggactgaag
gttggtggcgttggagtgacggattatgcagaaaggaagcccaatccagaacagcttgag
gaggttgtgtgtaaagatgatcccagagaaggtttctcctttgtcttaaacaactttggt
cttcttctggatgacagtttcctgcaaaacctgactgagaggatctgtgaagacaagaag
tgtcccacctatacttgtccaatttcatttaatgacaacaccgatgtcctcatcatgatg
gacagctcggcaagcgtgggctccaagaacttcgagatgaccaaggagttcgcacaaatg
ctggctaagcgctttttgtcagcagaaagaggaggcttccaggtccgggttggcgttggc
cagtacagcaacaatgccaacttcgaggccgaattttcctcaaacaccacccaggtgggc
gctcagatcacagaggcaaagttccagaatgcaggtacacaggtaacaaatgctctcaac
ttcgccattgagcgcttcaggggcggcaggacgaggaagaagaagctgctggtgttttcg
gatggtcgttctcaaggtgtcaacaacatccagattgaaaaatccatggagcaggtgagc
aacgcaggcattgagctgtacgtgctggccgtgggcaaccaggtaaacgaggtgcacctg
cgcaccttggtgagccgaggacggccctatgacaatatatacgccaaccgccaccttttc
aaagtacccgactaccgctcattggtcactggggtcttttaccaaactgtatcccgcaag
atttccctggagtcaagggggtga

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (10)   

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