[go: up one dir, main page]
More Web Proxy on the site http://driver.im/
KEGG   Salmo trutta (river trout): 115161450
Entry
115161450         CDS       T08542                                 
Name
(RefSeq) sodium channel protein type 4 subunit alpha A-like
  KO
K04837  voltage-gated sodium channel type IV alpha
Organism
stru  Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:stru00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:stru04040]
    115161450
Ion channels [BR:stru04040]
 Voltage-gated cation channels
  Sodium channel, voltage-gated (Nav)
   115161450
SSDB
Motif
Pfam: Ion_trans Na_trans_assoc IQ_SCN5A_C PKD_channel IQ ATP-synt_B IQCJ-SCHIP1 GPHH
Other DBs
NCBI-GeneID: 115161450
NCBI-ProteinID: XP_029568302
Ensembl: ENSSTUG00000027071
Position
2:complement(67918572..67952455)
AA seq 1782 aa
MFIMITILSNCFFMTMSDPPSWSKTVEYVFTGIYTFEASCKVLSRGFVVGPFTFLRDPWN
WLDFMVISMAYVTEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVGALVQSVKKMVDVM
ILTVFALAVFALIGLQLFMGNLRNKCVRWPILNSTVFDDYNSTSSLDGTMSFGETSNSTI
PFDFKDYISNIENHYYLEGSLDALLCGNSSDAGNCPEGFTCIKAGRNPNYGYTSYDSFGW
AFLSLFRLMTQDYWENLFQLTLRAAGKTYMIFFVLVIFLGSFYLINLILAVVAMAYDEQN
EATLKEAQDMEEEFQRLLEQYRIQAQEQADAAAGSQVTLTSRKELSHHSGSYGGSADDEQ
SLGDDVIKDCNGRIVPRLAIVPVSSESESVPEDEFKEDSMLHLEQPGLKNRSASAASVLT
TVMEELEDAQKPCPPGWYKFADTFLKWDCCVPWVWLKKWLLFIVMDPFVDLGITICIVLN
TLFMAMEHYPMSPEFDHMLSVGNLVFTGIFTAEMVFKLCAMDPYYYFQVGWNIFDSIIVT
FSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIV
FIFAVVGMQLFGKSYKECVCKIATDCELPRWHMHDFFHSFLIVFRILCGEWIETMWDCME
VAGAGMCLVVFMMVMVIGNLVVLNLFLALLLSSFSGDNLSSDDDGEMNNLQIAIGRINWG
IDWVKSFVRHMVLQLLGKKATGDKEGGEGIEGNPEKETFALNHLDTCQDSKMADGMTNCV
DGLQADGEMSLNVPIAQGEPDFEDDDDEDDSGSFTSDEENGHGDHIKLFGAVGDESSVCS
TVDYVPEPEPVEEEEEEEPEPEEPEACFTDGCIARWPCLTFDVSQGRGKKWWNLRRTCFT
IVEHDYFETFIVFMILLSSGALAFEDIYIERRRTIKIILEYADKVFTYVFIIEMLLKWVA
YGFKTYFTNAWCWLDFLIVDVSLVTLGANWMGYSELGPIKSLRTLRALRPLRALSRFEGM
RVVVNALVGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKFYRCINTTTEELFPITEVNNR
SDCLALQHATQEARWVNVKVNYDNVGLGYLSLLQVATFKGWMDIMYAAVDSREVEEQPSY
EINLYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGDDIFMTEEQKKYHEAMKKL
GSKKPVKPIPRPTNMIQGAVFDFITQQFFDIFIMVLICLNMVTMMVETDDQSAEKENVLY
KINLAFIVVFTGECLLKMFALRHYFFTIGWNIFDFVVVILSVAGIMLSDIIEKYFVSPTL
FRVIRLARIGRVLRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFAY
VKKQAGIDDIFNFQTFGSSIICLFEITTSAGWDGLLLPILNSGPPDCDPDIENPGSDVRG
NCGNPGMGIMFFCSYIIMSFLVVVNMYIAIILENFNTAQEESGDLLCEDDFVMFDETWEK
FDLEGTQFIEYAKLSEFCDTLQEPLRIAKPNRIKLISMDLPLVTGDKIHCLDILLAVTQE
VLGEGVEMTAMKVSIEAKFNMNNPTTDSYEPITTTLRRKEEEAAAVIIQRAYRKHLLKRS
ILHASFMRRSKRQIRREENEEPPETEGLLVRKMNVLYGSDLDLAAEMELAGLRAQPTSVP
LVSNRPSDLPKQTQTTRPEPGRPLLLVVPVEVTSEVVLRSAPVTSDPPLDLPEQTEPSGS
EPTGLEPTWPEPAGPNLLVVPVEVTPYLCSRESIDNLRESIV
NT seq 5349 nt   +upstreamnt  +downstreamnt
atgttcatcatgattaccattctgtcgaactgcttttttatgacgatgagcgacccaccg
tcatggagtaaaactgttgagtatgtttttactggtatttatacctttgaggcctcatgc
aaagtgttgtcaagaggctttgttgtcggaccttttacattccttcgagatccatggaat
tggctggatttcatggtgatcagcatggcgtacgtcacagagtttgttgatctaggcaac
gtgtcagcccttaggacgttccgtgtactccgagcccttaaaacaatcactgtgattcct
ggattaaaaaccatcgtgggcgccctggtccagtctgtaaagaaaatggtagacgtgatg
atcctcactgtgttcgccctggccgtgtttgcactcatcggcctgcaactcttcatggga
aatttgcgcaacaagtgtgtccgatggcccatcctcaactcaacggtgttcgacgattac
aactccacctcgtcgcttgacggcaccatgagtttcggcgaaacatcaaattccactatt
cctttcgatttcaaggactacatcagcaatatagagaatcactactatttggaaggtagt
ctggatgctcttctctgcggaaacagctctgatgctgggaactgcccagaaggattcacg
tgcataaaggctgggagaaaccccaactacggctacaccagctacgactccttcggctgg
gccttcttgtccctcttcagactcatgacgcaggactactgggagaacctgttccaactg
acacttcgagcagcggggaagacgtacatgatcttctttgtgctggtcatcttcctggga
tccttctacctcatcaacctcatcctggccgtggttgccatggcctacgacgagcagaac
gaggccactctgaaagaggcgcaggatatggaggaggagtttcagaggcttctggagcaa
tacaggatccaagcccaggagcaagctgatgctgctgctggaagtcaggtgaccctgacc
agtcggaaagagcttagtcatcactctgggtcatacgggggctctgcggatgacgagcag
agcctcggagatgatgttatcaaggactgtaatgggagaatcgtgccccgtctggccatc
gtaccagtgtcctccgagtcggagtcggttccagaggacgagttcaaagaggacagcatg
ctccacctggagcagccaggcctgaagaacagatcggcgagtgctgctagtgttctcacc
accgtcatggaggagctggaagacgcccagaagccttgtccgcccggctggtacaagttt
gccgacaccttcctgaagtgggactgttgtgtgccctgggtatggttgaagaagtggttg
ctctttattgtgatggaccccttcgtggacctaggcatcaccatctgcatcgtgctcaac
acactcttcatggccatggagcactaccccatgagcccagagtttgaccacatgctctcc
gtggggaacctggttttcactgggatcttcacagcagagatggtcttcaagctttgcgcc
atggatccctactactacttccaggtcggctggaacattttcgacagtatcattgtcacg
ttcagtctggtggagttaggtctagccaatgtccaaggcctgtccgttctcaggtctttc
cgtttgctgcgtgtcttcaaactagccaagtcgtggcccacgctcaacatgctgatcaag
attattggcaactctgtgggcgctctgggcaacctgaccttggtgctggccatcatcgtc
ttcatcttcgccgtggtgggcatgcagctcttcggcaagagctacaaggaatgcgtgtgt
aagattgccaccgactgtgagttgccgcgttggcacatgcacgacttcttccactcattc
ctcatcgtgtttcgcatcctgtgcggggagtggatcgagaccatgtgggactgtatggag
gtggccggagccgggatgtgcctggtggtcttcatgatggtcatggtcatcggaaacctg
gtggtgctgaatctcttcctggccttgctgctcagctcattcagtggagacaacctgtcc
agtgatgatgacggtgagatgaacaacctccagattgccatcggcaggatcaactggggc
atcgactgggtaaaatcctttgtccgccacatggtcctgcagctactgggcaaaaaggcc
accggggacaaggaagggggtgaggggatcgaaggaaaccccgaaaaggagacctttgca
ctaaaccacttagacacgtgccaggattccaaaatggccgacggaatgaccaactgtgtg
gacgggcttcaggcagacggcgagatgagcctcaatgtgcccattgcccagggggagccg
gactttgaggacgatgatgatgaggatgacagtgggtcttttacatcagatgaagaaaat
ggacatggtgatcacataaagttgtttggtgcagtgggtgacgagtcctcggtgtgcagc
acggtggactatgtacctgaaccagagcctgtggaagaggaggaagaggaggagccagag
ccagaggaaccagaagcttgcttcactgatggctgtatcgcgcgatggccgtgtctgaca
tttgacgtctctcagggcagaggcaagaagtggtggaacctccgcaggacctgtttcacc
atcgtggaacacgactactttgagaccttcatagtcttcatgatcctcctaagcagtgga
gctctggcttttgaggatatttacattgagaggcgaagaactatcaaaatcatcctggag
tatgcagacaaagtcttcacctatgtctttatcattgagatgctcttaaaatgggtggcg
tacggcttcaagacctacttcaccaacgcttggtgttggctggacttcctaattgtggat
gtttccttagtcactttaggagctaactggatgggctactctgaacttggaccaatcaag
tctcttagaacactcagggctctaaggccacttcgagccctgtcaagatttgagggaatg
agggtggtggtaaacgctcttgtcggcgccatcccctccatcttcaacgtgctgctggtg
tgcctcatcttctggctcatcttcagcatcatgggggtcaacctgtttgccggaaagttc
taccgctgcatcaacaccaccacggaggagctgttccccatcaccgaggtcaacaacagg
agcgactgccttgccctgcagcacgccacccaggaagcccgctgggtcaacgtcaaagtc
aactacgacaacgtgggcttgggctacctctctctgctgcaagtggccacatttaaaggc
tggatggacatcatgtatgctgcagtggactctcgagaagtggaggagcagccctcatat
gagatcaacctctacatgtacatctactttgtcatcttcatcatcttcggctccttcttc
accctcaatcttttcattggtgttattattgacaatttcaaccagcaaaagaaaaagttt
ggtgacgacatctttatgacagaggagcagaagaaatatcatgaagccatgaagaaactt
ggctcaaagaagccagtgaagcctatcccaaggcctacgaacatgattcaaggcgctgtg
tttgacttcatcactcagcagttctttgacatcttcatcatggtcctcatctgcctcaac
atggtcaccatgatggtggagacggacgaccaaagcgcggagaaggaaaacgtcctttac
aagatcaacctggccttcatcgtcgttttcaccggcgagtgtctgctcaagatgtttgcc
cttcgccattacttcttcaccatcggatggaatatttttgattttgtcgtggtcatcctg
tccgtcgcgggtataatgctgtcggacatcatagagaagtactttgtgtcacccaccttg
ttcagggtcatcaggctggctaggataggcagggtcctgcgtctcatcaaaggtgccaag
ggcattcggacgctgttatttgcgttgatgatgtcactccctgccctgttcaacatcggc
ctcctgctcttcctcatcatgttcatcttctccatattcggcatgtccaactttgcctat
gtcaaaaaacaggcgggcatcgacgacatcttcaatttccagacgttcggcagcagtatt
atctgcctgtttgagatcaccacctctgcgggttgggatggtcttctgctgccaattcta
aacagcggtcctccagactgcgacccagacattgagaacccgggctcggacgttcggggc
aactgcggcaacccaggcatgggtatcatgttcttctgcagctacatcatcatgtccttc
ctggtggtggtcaacatgtacatcgccatcatcctggagaacttcaacacggcccaagag
gagagcggggacctgctgtgcgaggatgactttgtgatgttcgacgagacctgggagaag
ttcgaccttgagggcacgcagttcatcgaatacgccaagctgtcagagttttgtgacacc
ctgcaggaacccctgcgtatcgccaagcccaaccggatcaagctgatctcgatggacctg
cccctggtcacgggcgataagattcactgcctggacatcctgctggccgtcacccaggag
gtgctgggcgaaggggtggagatgacggccatgaaggtgagcatcgaggccaagttcaac
atgaacaaccccacgacagactcctacgagcccatcaccaccacgctgcggcgcaaggag
gaggaggcagcagccgtgatcatccagcgggcttaccgcaagcacctgctcaagcgctcc
atcctgcatgcctccttcatgcgccgctccaagaggcagataaggcgagaggagaacgag
gagcccccggagacggagggacttctggtgcgaaagatgaacgtgctctatgggagcgac
ctggaccttgccgcagagatggaattggctgggttgcgagcacaacccacatcggtccct
ctggtgtccaatcggccatcggacctccccaagcaaacacagaccaccaggccggagcct
ggcagaccactcctcttggtggtccccgttgaggtcaccagtgaggtggtgttacgctca
gcccctgtgacgtctgatccgccattggacctccccgagcaaacagaaccatcagggtcg
gagcccacagggctggaacctacctggccggagcctgctgggccaaacctcttggtggtc
cccgtagaggtcaccccctatttgtgtagccgtgagtcaatagacaacctgcgagagtcg
attgtataa

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (13)   

Download RDF
DBGET integrated database retrieval system