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KEGG   Sphaerodactylus townsendi (Townsend's least gecko): 125441761
Entry
125441761         CDS       T08213                                 
Symbol
RXRA
Name
(RefSeq) retinoic acid receptor RXR-alpha isoform X1
  KO
K08524  retinoid X receptor alpha
Organism
stow  Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow03320  PPAR signaling pathway
stow04148  Efferocytosis
stow04920  Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:stow00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    125441761 (RXRA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:stow03000]
    125441761 (RXRA)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:stow03310]
    125441761 (RXRA)
Transcription factors [BR:stow03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    125441761 (RXRA)
Nuclear receptors [BR:stow03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   125441761 (RXRA)
SSDB
Motif
Pfam: Hormone_recep zf-C4 Nuc_recep-AF1 tRNA_bind_3 CRT10
Other DBs
NCBI-GeneID: 125441761
NCBI-ProteinID: XP_048368593
Position
LG12:complement(52745545..52935580)
AA seq 458 aa
MTMPPLHPSIGPGIGSSLGSPSQLHSPIGALNSPLNGMGPPFSVISSPMGSHSMSGPSTP
GLGFGTGSSQLNSPMNPVSSTEDIKPPLGLNGVLKVPVHPSSAMASFTKHICAICGDRSS
GKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKRE
GMEHHPSRPTRLPGRQEEQAVQEERQRGKDRNENEVESTSNANEDMPVEKILEAELAVEP
KTETYIEANMGLTPNSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAG
WNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDK
TELGCLRAIVLFNPDSKGLSNPTEVEALREKVYASLEAYCKHKYPDQPGRFAKLLLRLPA
LRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQMT
NT seq 1377 nt   +upstreamnt  +downstreamnt
atgaccatgccgcccctccatccgtccatcgggcctggcatcggctcctccttggggtcc
ccgagccagctgcattcacccatcggcgccctgaactcccccctcaatggcatggggcct
cctttctcggtcatcagctcccccatggggtctcactccatgtctggaccatccaccccg
ggcctcggcttcggcactggcagctcacagctcaattcccccatgaacccagtgagcagc
acagaggacattaaaccccctttgggcctcaacggagttcttaaagtgccagtccaccct
tcatcagccatggcctcgttcaccaagcacatatgcgctatctgtggggacagatcttca
ggtaaacattatggggtatacagctgcgagggttgtaaaggcttcttcaagaggacggtg
cgcaaagacttgacgtacacttgccgcgataacaaggactgcttaattgacaagcgtcag
cggaatcggtgtcaatattgccggtaccagaaatgcctggcgatgggcatgaagagagaa
gggatggagcaccatccatcccggcccacaagactcccaggaaggcaggaagaacaagcg
gtgcaggaagagaggcaacgagggaaagaccgcaacgagaacgaggtcgagtcaacgagc
aacgcaaacgaagacatgcccgtggagaagattctagaagcggagctggccgtggagcca
aagactgaaacatacattgaagcaaacatgggccttactccaaactcgcccaacgacccg
gtcaccaacatatgccaggcagcggacaagcagctcttcaccttggtggagtgggccaag
aggatcccccatttctcagaactgcccttggacgaccaagtcatcttgctcagggctggc
tggaacgagttgcttatcgcctccttttctcaccggtccatagctgtgaaagacgggatc
ctcctggccacgggcctccatgtccaccggaacagtgctcacagcgcaggggttggcgcc
atcttcgacagagtactgacggaactcgtgtccaaaatgagggacatgcagatggacaag
acagaactggggtgcctcagggccatcgtcctcttcaaccccgattcaaaaggtctttcc
aaccccaccgaggtcgaggctctccgtgagaaggtgtacgcttcgcttgaggcctactgc
aaacacaaataccctgaccagccaggaaggtttgccaagctgctgcttcgcctgcctgcc
cttcgctccatcggcctgaaatgcttggagcatctcttcttcttcaagctaataggcgac
acgccgatcgacaccttcttgatggagatgctggaagccccccaccaaatgacttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (5)   
   Pfam (5)   
All databases (23)   

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