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KEGG   Sphaerodactylus townsendi (Townsend's least gecko): 125440828
Entry
125440828         CDS       T08213                                 
Name
(RefSeq) collagen alpha-6(VI) chain-like
  KO
K06238  collagen type VI alpha
Organism
stow  Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow04510  Focal adhesion
stow04512  ECM-receptor interaction
stow04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:stow00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    125440828
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    125440828
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:stow04147]
    125440828
   00536 Glycosaminoglycan binding proteins [BR:stow00536]
    125440828
Exosome [BR:stow04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   125440828
Glycosaminoglycan binding proteins [BR:stow00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   125440828
 Hyaluronan
  Extracellular matrix or blood plasma proteins
   125440828
SSDB
Motif
Pfam: VWA VWA_2 Collagen vWA_SIBA-E HDA2-3
Other DBs
NCBI-GeneID: 125440828
NCBI-ProteinID: XP_048366815
Position
LG11:complement(29726470..29801550)
AA seq 2263 aa
MLLILFLIVLGTQTSIAQKPAPESTDVVLLIDSSNALGKKSFPSVKSFVNRVISSLPVGP
NKYRIALVQYSDDVHVEFQLDDFKGKPPMLNHLKKSVSYRGGSLKTGNAIQKVHETFFKV
PRRDRNQIVVVTTSGPSEDDVKRPAKRLQDDGIKIIALGMQAASVQELRSVATQHFFYNL
PTPRDFATFSQNMSTVIGEAIQLDDSVVVSTPSPPRITSPPRIPSPPRIPSPPSINVSVA
PPPECLHDSVADIVFVVDEGVSVENSRYIESFLSDTINSLDVKKGCIQTGLVTYSTESQI
ISLLKNETVKTDGLWDLHRSSGKSNLGAAINFTRKRVFDKHAGSRKTQGVEQIATIITHR
PADDLLSDAATLLRQAGVTVFAIGVEGANATQLTEIASYPPERNVLKLARFSDLPNQATT
FKKKLFNQIQDTLYVQSERRLLLKTGCIDTEEADIYFLVDGSSSIGWLEFDQMKTFLKEV
TKQFNVGPNHVRFGVVQYSHASSIKLHFELDEYTKTNTLERAINNINQLTGDTYTGEALK
FMQPLFEKARQQRGNKVPCYLIVLTDGEAHDNVKIPAEKLRNAKVNIYAIGVRQYNITQL
HEIAGSRVYSVQQFDSLKFIQDEIVRDVCSQEACKEMKADIMFLVDSSGSIGTENFNKMK
NFMSDLVNKSDIGLDQVRIGVVQFSGSAKEEFPLNKYSAKSDIIEAIRRMVPIEENTLTG
KALEFVAEYFNSSKGSRSSVNKILILLTDGEAQDEVAAPAMSLRKDGITIYSVGVFNANK
TQLEEISGKLELVFYVENFDILEKIEGDIIFGICNPLEDGIPECKRIDRLDVVFVIDSSG
SIGDTNYDLMKDFMIGLVNKSDVGSDRVQFGALKYSDDPRTLFYLNTYNKKADVISAIRS
DTLLGQTTYTAKALRHSELLFTEAHGSRHYRNVPQVLIVITDGESHDAVELDEVSKKLRA
RGIEIYAIGIEGAKPDELQTMAGSNKSYYYVEQFAGLQNISTELSDELCDDSKPECEIYA
DLVFLIDGSNSIRVNDFETMKDFLKKLLDQINYNNKMQIGMAQFSVFYQEEFPLSSNYSK
SEVQDKISKVSKMTGNKTNIGEALKKVKAFFSPPRRRVIRDIQPKLLVITDGRSYDRVAQ
PAEDLRKEGVEIYAIGVGNVKDTELLQIAGSPERKYRIANFSGLSNLKKRVTNEMCNGGV
KAACFVDIVIGFDISSQKLGDHLFHGQSLLETHLPKILEYLTSVSTVSCGTGTKTQFSVA
ISKENMNSTSSSDLQVDPTKIMEELRKVTVNKPSYLNVPFLNTLWNTFGNLPRNEKRSQV
LLLFSDGLDADVKLLKERSEEFRKKGLDGLITVTLEGASNYHNLQYIEFGKGFGYHNHLT
ISLQNIAQSLFGYMSQIAERTCCCVFCTCMGEEGLAGQRSIPGTKGPTGANGIPGYIGDD
GEPGPSGLPGPYGRQGYTGCQGDQGAKGQRGWSGKKGDNGIYGIDGINGEEGSQGLPGPK
GEKGDPGQPGNPGSRGLPGEPGSKGFQGDPGNPGVDSIIKGAVGPNGLRGSKGERGPNGS
AGSAGSKGNTGAEGQRGVPGPMGVRGQPGPGGLPGEPGFQGPQGEAGIPGVSGEKGTSGN
KGLQGSFGVAGPKGDQGKPGIKGNKGENGDPGEKGERGLRGQRGTKGEAGTAGYGKRGRK
GSKGQEGFPGDTGIQGEIGVTGIPGEPGPKGHRGKMGPVGETGVRGTRGERGYPGRPGAK
GTKGLASFSPCELIEYVRERSPCWKGAQACPVYPTELVFALDVSQDTTPATFERMREVIT
AIVNSTRTRESNCPVGARVAVVSYNSNTHHLIRFSDFKNKKSLLQELKSLSYQRSSSGRD
IGGSMRYVARHVFKRTLQSPNMRKVAVFFSNGQSTDTVSISTAVLEFRALDILPVVIAFK
NVPEVNRAFSMDDSGLFQVINIRQERDYTTALQRFQWCILCYDKCKVNASCLRDETSPPA
YVDAAFILESSRKVSPLEFAKLKDFLSLSIDNFDVSAQPESTSVGDRLAVVSHAPPDFRP
QTQKNPVKAEFDFVTFGSKKQMKRHIQESIQQLNGAAALGHAIQWTITNVFTGAPNQRKH
RAIFVISVGETSRWDKEVLKDAALRAKCQGYALFVLSLGHEYNVELEELVSSPTEHHLVQ
LGRCHKAELGYAVKFLKPFVRLLRNEINSYPPAQLKRKCSDINTQKPIEVPLQSRYSIAK
DETVSRRAQRLETESEVWEHLSGDSVSHEHLISSEQQTIVFGN
NT seq 6792 nt   +upstreamnt  +downstreamnt
atgcttctgattttgtttctcattgttcttgggacacagacttctatagcacagaaacct
gcccctgagtctacagatgtagtccttttgattgacagctcaaatgctcttggcaaaaag
tctttcccttctgtgaaatcgtttgttaacagagtaatcagcagtcttccagtaggtccg
aacaaatatcgcattgcacttgtgcagtacagtgatgatgtgcacgtcgaattccagctg
gatgattttaaaggcaaacccccaatgttaaaccatcttaaaaagagtgtttcatacagg
ggtgggtctttaaaaacaggaaatgccatacaaaaggtccatgaaacatttttcaaagtc
ccaaggagagacagaaaccaaattgttgtggtcacaacttcaggtccttcagaagatgat
gtgaagagacctgcaaaaaggcttcaggatgatgggataaaaataatagctttaggaatg
caggctgcatctgttcaggaacttcgatcagtggctacacagcatttcttttataacctt
cctacaccaagagattttgcaacattttctcaaaatatgtcgacagttattggagaagcc
atacaactggatgattcagtggtcgtctcaacgcctagtccaccaaggataactagtcca
ccaaggatacctagtccaccaaggatacctagtccaccaagtataaatgttagcgtagca
cccccaccagagtgtctacatgattcagttgcagacattgtatttgtggtggatgaaggc
gtttcagttgaaaactcccgctacattgaatcattcttgagtgacacaataaactctctt
gatgtgaagaaaggatgtatacaaactggtttagtgacctacagcactgagtcacaaata
atatcattgctaaagaatgaaacagtcaaaactgatggtctatgggaccttcacagatct
tcagggaaatctaacttgggtgctgccattaattttaccaggaaaagagtttttgataag
catgctggaagcagaaagactcaaggagtggaacaaattgccactataatcacccacaga
cctgcagacgacctcttaagtgatgcagcgactctccttagacaagctggtgtgacagtg
tttgccataggtgtcgaaggagctaatgcgacccagttaactgagatagcatcatatcca
cctgaacgaaatgttttaaaacttgccagattttctgacctgccaaatcaggccacgact
ttcaaaaagaaactcttcaatcaaatacaggacacactttatgttcaatctgaaagaaga
ttactgctcaaaacaggatgtattgacacagaagaggctgatatttacttccttgttgat
ggctcttcaagcattggctggttagagtttgatcaaatgaaaacgtttttgaaggaagta
actaagcagtttaacgttggaccaaatcacgttcgatttggagttgtgcaatattcacat
gcttctagtattaaattgcactttgaacttgatgagtacactaagacaaacacattagaa
agagctattaataatatcaaccagttaacaggagatacatacaccggagaagctttaaaa
ttcatgcagcctttgtttgaaaaggcaaggcaacaacgtggaaacaaagtgccctgctat
ctcattgtgttgacagatggggaggcccatgataatgtgaagatacctgctgagaaactg
aggaatgcaaaggtgaacatctacgccattggtgtaagacagtataatataacacaactg
catgagattgcaggctcaagggtttactctgtgcaacaatttgactccttgaaatttata
caagatgagattgtccgagatgtatgttctcaagaagcctgtaaggaaatgaaagctgac
atcatgttcctagtggacagctccggtagcattggcactgagaattttaataaaatgaag
aactttatgagtgacctggtaaacaaatctgacatcggcttagaccaagttcgcattggc
gttgttcagttcagtggcagtgctaaagaagaatttccactaaacaaatattcggcaaaa
agtgacataattgaagcgattagaaggatggtacccatcgaagagaacacactcactgga
aaagcactggaatttgtggctgaatatttcaattcatccaaagggtcacgctcctccgtg
aacaaaattctcatcttgctcacagatggggaagcacaggatgaagtagcagctccagct
atgtccctgagaaaggatggtatcactatctattcagttggggtgtttaatgccaataaa
acacagcttgaagagataagtgggaaacttgagctggtgttttatgtagaaaactttgat
attcttgagaagatagaaggcgacatcatttttggcatatgtaatccccttgaggatgga
attccagagtgcaaaaggatagaccgtttagatgttgtatttgtaatagacagttctggc
agcataggggacacaaactatgacctcatgaaagacttcatgattggcttggtcaataaa
tctgatgttggcagtgatcgtgttcagttcggagctctgaagtattctgatgatccacgt
acacttttttaccttaatacctacaataagaaagcagatgtcatttcagctatccgaagt
gacacacttttgggccaaactacatacacagctaaagctcttagacactcagaattgttg
ttcactgaggcccatggaagtcgccactacaggaatgttcctcaggttcttattgtgatt
actgatggtgaatcacatgatgcagtggaacttgatgaagtgtctaaaaaactcagggct
cgtggcattgagatatatgccattgggatagaaggtgcaaagccagatgagcttcagacc
atggcaggatcaaacaaatcttactactatgtggaacagtttgcgggattacaaaacata
tccacagagttatcagatgagctgtgtgatgattcaaagccagaatgtgaaatctacgct
gatcttgttttcttgattgatggttccaacagtatacgagtgaatgattttgagacaatg
aaagacttcttgaagaaactgcttgatcagattaattataataacaaaatgcaaattggc
atggcccaattcagtgtattttaccaagaagaatttcctttgagtagtaactatagcaaa
tcagaggtgcaagacaaaatctctaaagtctcaaagatgacaggtaacaaaactaacatc
ggagaagctctcaaaaaagtgaaggccttcttcagtccaccaagacgcagagtgattaga
gatattcagccaaaattgctggtaatcactgatggacgctcatatgaccgggtcgctcaa
ccagctgaggatctgagaaaggagggtgtggagatatatgcaataggagtagggaatgta
aaagatacagaacttctacagatagctggatccccagagaggaaatacagaattgctaat
ttcagtgggctgtcaaacctcaaaaaacgtgttactaacgaaatgtgtaatggtggagtt
aaagcagcatgttttgtggatatcgttattggatttgacatttcatctcaaaagctgggt
gatcatttattccatggacagtccctgttggaaacccacctgcctaagattttagaatat
ttgacatctgtaagcactgtgagttgcggtacaggaacaaagacacagttcagcgtggct
atttctaaggaaaacatgaactcaacttcctcatcagacctccaagttgatcctacaaaa
atcatggaggaactcagaaaagttacagtcaacaaaccatcttatctaaatgttccattc
ttgaacacactttggaatacatttggcaatctacctcgtaatgaaaaacgaagccaggtg
ttacttcttttctctgacggtttggatgcggatgtaaaattgctcaaagaaagatctgaa
gaatttagaaaaaaaggacttgatggactgataacagttactctggaaggagctagcaac
tatcataatttacaatacattgagtttggaaaaggatttggatatcataatcatttgacc
attagcttgcaaaatattgcccaaagcttatttgggtatatgagccaaattgctgagaga
acatgctgctgtgtattttgtacctgcatgggtgaagaaggcctcgctgggcagagaagc
attccagggacaaagggacctactggtgctaatggaattccaggatacataggagatgat
ggagagccaggtcccagtgggctacctggaccatatggacggcagggttatactgggtgc
caaggtgatcaaggagcaaaagggcaacgaggatggagtgggaaaaagggagacaatggg
atttatggaattgatggaattaatggagaagagggatcacaaggactgccaggaccaaaa
ggagaaaagggagaccctggccagccgggcaatccaggatcaagaggacttcctggtgaa
cctggttcgaaaggctttcaaggagatcccggtaatcctggagtagacagcatcattaaa
ggagcagttggccccaatgggttacgtgggagcaagggtgaaagaggaccaaatggttca
gcaggctctgcgggatctaaaggcaacacgggagcggagggacaaagaggagttccgggg
ccaatgggggtgagaggacaacctggaccaggtggtttgccaggcgaaccaggatttcaa
ggcccacagggtgaagctggtattcctggtgtgagtggagagaaaggaacttcagggaat
aaaggtcttcagggaagctttggagtagctggtcctaaaggtgatcaaggaaaacctgga
atcaaaggaaataaaggagaaaatggggatcctggagagaaaggagaaagaggtctccgt
ggtcagcggggaacaaagggagaagcaggaactgctggttatggcaaacgtggaagaaaa
ggatcaaagggtcaagaaggattccctggagacactggaattcagggtgaaattggagtc
actggcattcctggggaacctggtccaaaagggcatagaggaaaaatgggtcctgtgggg
gaaacaggtgtcagaggtactcgaggagaacgaggttatccaggacgtccgggtgcgaaa
ggaacaaagggactggcttcattttcaccctgtgaactcattgagtatgttcgtgaacgc
agcccttgctggaaaggagcccaggcatgtccagtctatcccactgaattagtgtttgcc
ttggatgtatcccaagataccactcccgcaacatttgaacgaatgagagaggtcatcact
gcaattgtaaacagcaccagaacccgagaaagcaattgccctgtgggagccagagtagct
gttgtgtcctacaactccaatacgcaccatctaatccgcttctcagatttcaagaacaag
aaatcgttgctccaagagctcaagagcctttcctaccagagatcttcaagtggacgggac
attggtggatcaatgagatatgttgccaggcatgttttcaagagaactctccagagtcct
aacatgagaaaagttgctgtgttcttcagcaatggccaatctacggatacagtttcaatc
agcacagcagtcctagaatttagggcgttagatattcttccagtggtcatcgcttttaaa
aacgtccctgaggtcaaccgtgccttttcgatggatgactcgggactgtttcaagtcatt
aatattcgtcaggaaagagattatacaacagctttgcaaagattccagtggtgcatactt
tgctatgacaaatgcaaggtgaacgcatcttgcctacgtgatgaaacctcacctcccgct
tatgtagacgctgctttcattttggaaagctcaaggaaagtaagccctcttgaatttgca
aagctgaaggatttcctaagcctctccattgacaactttgatgtttctgctcaaccagag
agcacttcagtaggtgacaggctggctgtggtgagccatgctccaccagatttcaggcct
caaacacagaagaatccagttaaggctgaatttgactttgtaacctttggcagtaaaaag
caaatgaaaaggcatatccaagagtctatccagcagctgaatggagcagctgctcttggc
catgctatacagtggaccattaccaatgtcttcacaggagcacccaaccagaggaaacac
agagctatctttgtgatatctgttggggaaacaagtcgatgggacaaggaggtgttgaaa
gatgcagccctgagagccaaatgccaaggctatgctctatttgtgctctcattggggcat
gagtacaatgtagaacttgaggaactggtcagcagccccacggagcatcatctggtacag
cttgggagatgtcacaaggctgaacttggatatgcagtgaagtttctgaagccatttgta
cgactcctccgaaatgaaatcaacagctatccaccagcacagcttaagagaaaatgttca
gacatcaacacccagaagcctatagaggttcctctgcagtccagatacagcatagcaaag
gatgaaactgtgtccaggagagctcagagactagagacggaatctgaagtttgggaacat
ttgtctggtgattcagtatcccatgaacatttaatcagcagcgaacagcagaccattgta
tttggaaattag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (9)   

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