LOCUS XM_015920453 1122 bp mRNA linear INV 14-MAR-2016
DEFINITION PREDICTED: Acropora digitifera enoyl-CoA hydratase,
mitochondrial-like (LOC107354051), transcript variant X2, mRNA.
ACCESSION XM_015920453
VERSION XM_015920453.1
DBLINK BioProject: PRJNA314803
KEYWORDS RefSeq.
SOURCE Acropora digitifera
ORGANISM Acropora digitifera
Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Scleractinia;
Astrocoeniina; Acroporidae; Acropora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_015441604.1) annotated using gene prediction method: Gnomon,
supported by mRNA and EST evidence.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Acropora digitifera Annotation
Release 100
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 6.5
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..1122
/organism="Acropora digitifera"
/mol_type="mRNA"
/db_xref="taxon:70779"
/chromosome="Unknown"
/geo_loc_name="Japan:Okinawa, Kunigami, Oku"
gene 1..1122
/gene="LOC107354051"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 2 mRNAs, 1 EST, 4 Proteins, and
100% coverage of the annotated genomic feature by RNAseq
alignments, including 3 samples with support for all
annotated introns"
/db_xref="GeneID:107354051"
CDS 170..736
/gene="LOC107354051"
/codon_start=1
/product="enoyl-CoA hydratase, mitochondrial-like isoform
X2"
/protein_id="XP_015775939.1"
/db_xref="GeneID:107354051"
/translation="MQNLTYQKCLLGDFLAHWTRVTRCKKPVIAAVNGFALGGGCELA
MMCDIIYAGNKAKFGQPEILLGTIPGAGGTQRLPRAVGKSLAMEMILTGDPISAEEAK
NSGLVSKVFPVEELVNEAVKTAEKISGLSKIAVQLAKEAVNTGYETSLSEGLHFEKRM
FHSTFSTDDRKEGMTAFVEKRKAEFTDN"
misc_feature <170..727
/gene="LOC107354051"
/note="Crotonase/Enoyl-Coenzyme A (CoA) hydratase
superfamily. This superfamily contains a diverse set of
enzymes including enoyl-CoA hydratase, napthoate synthase,
methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA
dehydratase, and dienoyl-CoA isomerase; Region:
crotonase-like; cl23717"
/db_xref="CDD:474030"
misc_feature order(224..226,248..250,311..322,356..367,383..385,
389..397,401..406,419..424,428..433,437..442,449..451,
482..484,491..493,536..538,545..550)
/gene="LOC107354051"
/note="trimer interface [polypeptide binding]; other site"
/db_xref="CDD:119339"
ORIGIN
1 acatgcaaca caattatttt tcctcattca accaatcaga tcattgtttt ctggcattgt
61 cattgtcgct gccagtgctg tcatccttgc ttaagctgaa cagtgtgttg aagtggctgt
121 acactgtaag gttcttggtt taaactcagc tggagctgac atcaaagaaa tgcagaattt
181 aacataccag aaatgcctgc tgggtgactt tcttgcacat tggactcggg ttactcgctg
241 caaaaagcct gtcattgctg cagtcaatgg atttgccctt ggaggtggct gtgagctggc
301 tatgatgtgt gacataattt atgcaggcaa caaagccaag tttggtcaac cagagatcct
361 tcttgggaca attcctggtg ctgggggaac ccaacgcctt ccacgtgctg tgggaaaatc
421 tcttgccatg gaaatgatct tgactggaga tcctatatcg gcagaagaag cgaaaaattc
481 tggcttagtc agtaaagtgt ttcctgtaga ggaactggta aatgaagcag tgaagactgc
541 agagaagatc tctggattat caaaaattgc tgtgcagctt gccaaagaag ctgtcaacac
601 aggctatgaa acctctctat ctgaaggttt gcacttcgag aaaagaatgt ttcactcaac
661 attctcaaca gacgatcgca aagagggtat gacagcgttt gtggagaaac gaaaagctga
721 atttaccgac aactaaatta gcaaacacac cgtgatgttg atctctctag cctcactccg
781 agaagtagct cgatatatcg cgccatagtg aataacaatt gtctccagag cgcctttttt
841 gaaatggtgc aaacaaattt ttccttgtca tagaaaaagt ttcaaacgaa ttttactgaa
901 aattgtatgg gaatggatga gcaatctagt aattattctc cagttgagat gtgtcaaaat
961 gagacgcggt gttactgtga ctataaacgg ttggcatttt ctaaagacaa gtaaattgga
1021 gaagggaatc aaaatagtga gatcaaatcg ttgtaatttt ggtaaaataa aagggaacca
1081 gttttccata attttgcgtg attaaagaaa ccattcactg ct
//