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KEGG   Rhipicephalus microplus (southern cattle tick): 119170557
Entry
119170557         CDS       T07403                                 
Name
(RefSeq) LOW QUALITY PROTEIN: retinoic acid receptor RXR-alpha-A-like
  KO
K08524  retinoid X receptor alpha
Organism
rmp  Rhipicephalus microplus (southern cattle tick)
Pathway
rmp04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:rmp00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    119170557
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rmp03000]
    119170557
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:rmp03310]
    119170557
Transcription factors [BR:rmp03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    119170557
Nuclear receptors [BR:rmp03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   119170557
SSDB
Motif
Pfam: Hormone_recep zf-C4 tRNA_bind_3 Peptidase_M85
Other DBs
NCBI-GeneID: 119170557
NCBI-ProteinID: XP_037277645
Position
5:complement(75790684..75792217)
AA seq 412 aa
MAYQEPTTRNLNGGASNGVSSSLLTQPSSYLSGGGYAAPLSVNRAPADAQSSLSNGPSSA
AAVDSRFPATHPLSGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACREER
RCVVDKRQRNRCQYCRYQKCLACGMKREAVQEERQRAKDRNDNEVESTSGGGSVCIGGAG
PGSPDMPLDRILEAEMRVDQPAPSVPSADASSRDPVNSMCQAADRQLHELVQWARRIPHF
EELPVEDRTALLKAGWNELLIAAFSHRSMNARDGIVLATGLVVQRHSAHSAGVGDIFDRV
LAELVAKMRDMKMDKTELGCLRAVVLFNPDAKGLKSTERVETLREKVYAALEEHCKRHHP
DQPGRFGKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDVFLQNVLQTPPNP
NT seq 1239 nt   +upstreamnt  +downstreamnt
atggcctaccaagagccaacaacgcggaacctcaatggcggtgcgtccaacggtgtttcg
agcagcctactgacgcagccgtcgtcctacctgtcgggcggcggctacgcggcaccgctg
tcagtgaaccgcgctcccgccgatgctcagtcgtcgctcagcaacgggccgtcgtccgcg
gctgccgtagactcgcgcttcccagccacccatccgctgagcggctccaagcacctctgc
tccatctgcggcgatcgggcatctggcaagcactacggcgtctacagctgcgaaggctgc
aagggcttcttcaagcgcaccgtgcgcaaggacctcacttacgcctgtcgagaggaacgg
cgctgcgtggtggacaagaggcagcgcaaccgctgccagtactgccgttaccagaaatgc
ctcgcgtgcggcatgaagcgcgaggccgtccaggaggagcggcagcgggccaaggaccgc
aacgacaacgaggttgaaagcaccagcggtggcggcagcgtctgcattggcggcgcaggg
cccggctctccggatatgccgctggaccgcatcctcgaagccgagatgcgagtcgaccag
ccggcgccgtctgtgccgtccgccgacgcgtcgagccgcgatcccgtcaacagtatgtgt
caggcggccgaccggcagcttcacgagctggtgcagtgggcccgacggattccgcacttc
gaggagctacccgtcgaagatcgcacggccctgctaaaggccggctggaacgagctgctt
atcgccgccttctctcaccgctccatgaacgcgcgcgacggcatagttctcgccacgggc
ctggtagtgcagcggcacagcgcgcacagcgctggcgtgggcgacatcttcgaccgtgtg
ctggccgagcttgtcgccaagatgcgtgatatgaagatggacaagaccgaactgggctgc
ctgcgcgccgtggtgctcttcaatccggacgccaagggattgaagagcacggagagagtc
gaaacgctccgtgagaaggtgtacgctgccctcgaggagcattgcaagcgccaccatccg
gaccagccgggccgctttggtaagcttctactgcggctgcccgccttgcgcagcatcggc
ctcaagtgcctcgagcacctgttcttcttcaagctcatcggagacactcccatcgatgtt
tttctgcaaaacgtgctccagacaccccccaatccctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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