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KEGG   Rhincodon typus (whale shark): 109930589
Entry
109930589         CDS       T06055                                 
Symbol
cacna1da
Name
(RefSeq) calcium channel, voltage-dependent, L type, alpha 1D subunit, a
  KO
K04851  voltage-dependent calcium channel L type alpha-1D
Organism
rtp  Rhincodon typus (whale shark)
Pathway
rtp04010  MAPK signaling pathway
rtp04020  Calcium signaling pathway
rtp04218  Cellular senescence
rtp04260  Cardiac muscle contraction
rtp04261  Adrenergic signaling in cardiomyocytes
rtp04270  Vascular smooth muscle contraction
rtp04530  Tight junction
rtp04912  GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:rtp04040]
    109930589 (cacna1da)
Ion channels [BR:rtp04040]
 Voltage-gated cation channels
  Calcium channel, voltage-gated (Cav)
   109930589 (cacna1da)
SSDB
Motif
Pfam: Ion_trans CAC1F_C Ca_chan_IQ GPHH PKD_channel
Other DBs
NCBI-GeneID: 109930589
NCBI-ProteinID: XP_048462349
Position
16:26154320..26658938
AA seq 2141 aa
MYELKEPCEGVNYASNRHPLSSDGWRLQSNSELPRPAALSWQAAIDAARQAKAAATMNST
TESNSAAAQRKRQQFAKSKKQQGSTVNNRPARALFCLNLNNPIRRACISIVEWKPFDIFI
LIAIFANCVALAVYIPFPEDDSNSTNHDLETVEYAFLIIFTIETFLKIIAYGLLLHPNAY
VRNGWNLMDFVIVIVGLFSVVLEQLTKAENVDGHATSTGKHSGGFDVKALRAFRVLRPLR
LVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFIGKMHKTCYFSNTNVI
AEDEPAPCAFSGNGRQCSMNGTECRGGWPGPNGGITNFDNFAFAMLTVFQCITMEGWTDV
LYWMNDAMGYELPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQ
QLEDDLKGYLDWITQAEDIDPENEEDIESAERRNPNIPIGETESDNTDHAGSGEGDNATC
CGSLCIRISKSKFSRHWRRWNRYWRRKCRAGVKSVTFYWLVIILVFLNTLTISSEHYNQP
LWLTFTQDIANKVLLALFTCEMLVKMYSLGLQAYFVSLFNRFDCFVVCGGIIETILVEFE
IMSPLGISVFRCVRLLRIFKVTRHWQSLSNLVASLLNSMRSIASLLLLLFLFIIIFALLG
MQLFGGKFNFDETQTKRSTFDNFPQALLTVFQILTGEDWNMVMYDGIMAYGGPSSSGMIV
CIYFIILFICGNYILLNVFLAIAVDNLADAESLNTVQKETEEEKERKRSARTASSEQRVD
GKYELDGISENNDRKVLTGTQISVDEDDKDPYPPTDVPDDDDEPEIPVGPRPQRLADLNL
KEKIVPIPEGSAFFIFSNTNPIRVACHRLINHHIFTNLILVFIILSSISLAAEDPIRNHS
FRNNILGYFDYAFTAIFTVEILFKMMTYGAFLHKGSFCRNYFNLLDILVVGVSLISFGIQ
SSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMFACIG
VQLFKGKFYRCTDEAKQLPEECKGTYILYKDGEVDHPVIRDRVWHNSDYNFDNVLAAMMA
LFTVSTFEGWPALLYKAIDSNGENIGPIYNNRVEISIFFIIYIIIIAFFMMNIFVGFVIV
TFQEQGELEYKNCELDKNQRQCVEYALKARPLRRYIPKNPYQYKFWYVVNSTGFEYIMFV
LIMLNTLCLAVQHYEQSPFFNYTMDILNMVFTAVFTVEMVLKLIAFKPMGYFSDSWNVFD
FLIVIGSIIDVVLGELDVSTGTSGQIFLSSGCGNSEESSRISITFFRLFRVMRLVKLLSR
GEGIRTLLWTFIKSFQALPYVALLIAMLFFIYAVIGMQIFGKVALQDHTQINRNNNFQTF
FQSVLLLFRCATGEAWQEIMLACMPGRRCDPESEYGPGEEFTCGSNFAIVYFITFYMLCA
FLIINLFVAVIMDNFDYLTRDWSILGPHHLEEFKRIWSEYDPEAKGRIKHLDVVTLLRRI
QPPLGFGKLCPHRVACKRLVAMNMPLNSDGTVMFNATLFALVRTALKIKTDGNLDQANEE
LRAVIKKIWKRTSMKLLDQVVPPADDDEVTVGKFYATFLIQDYFRKFKRRKEQGLVGKQP
RKNTTVALQAGLRTLHDMGPEIRRAISCDLQEEDIIEGTQEEDEDIYRRSGGLFGNHVNH
VPGKEQNFVQQTNVTQRPLQVKRPSTPPITDSEKSLPLSNLENSISHNQFNHSFSGKVSP
NSTNVNLNNANVSKIANGKHPRSLKHKQATGKNCNSHTSYIEKPKKSSSRRSDSGDGFVP
TVSQEEPKPDDWFEDEQYSGDQEYFSGEEYYEEDSMQSVDRQIHSDYQNQIQSNDLDFER
PKGYHHPCGYYEEDEPSSYAGYRRSPKRRLLPPTPIANRRPSFNFECLRRQNSQDDVSLS
PIFQQRTALPLHLMQHQVMAVAGMDSYKSRRLSPARSTRSWATPPATPPSKERSPYYTPL
IRVDRVESRENMNSNPPSMSRSSWYTDDIDIPYKIYTPSNLAVPNNFLQRYYDKRGSADS
LVEAVLISEGLGRYAKDPKFVSVTKHELADACDMTIDEMESAASNLLNGNLHNGTSGDVF
PVRNRCDYELQDYYPGYSDEETDTGIYEEDLGDEMICITTL
NT seq 6426 nt   +upstreamnt  +downstreamnt
atgtatgaattaaaggagccctgcgaaggagtaaattatgccagcaacagacacccttta
tctagtgacggatggcgtctccagtcaaactccgaattacccaggccagcagcactgtcc
tggcaagctgctattgacgcggctaggcaagctaaagctgccgcaaccatgaactcgacc
acggaatccaacagtgcagcagcccaaagaaaacgccagcaattcgccaagagcaagaag
cagcagggcagtacagtgaataacaggccagcccgtgccctattctgcttaaatctcaac
aaccctattagaagagcctgtattagtattgtagaatggaagccatttgatatctttata
ttgattgctatttttgccaattgtgtggccttagctgtttacatacctttcccagaagat
gactccaactcaacaaatcatgacctggaaacagtagaatatgccttccttataattttt
acaattgaaacatttttgaagattatagcatatggactgctgttacaccccaatgcttat
gtaagaaatggatggaacttgatggactttgtaattgtaattgtgggcttgtttagtgtt
gttttggaacaactaaccaaagcagaaaatgtggatggacatgcaacttccactggcaaa
cattcaggtggttttgatgtcaaagcccttagagcctttcgtgtattgagacctctaaga
cttgtatctggagtacctagcttacaggttgtcttgaattccatcatcaaagccatggtt
cctcttctacatattgctctactggtattgttcgtgattatcatttatgctatcatagga
ctggagctctttataggaaaaatgcacaaaacatgttacttcagcaacacaaatgtgata
gcggaggatgaaccagcaccttgtgcattctcagggaatggtcgccaatgctccatgaat
ggtacagaatgcaggggtgggtggccgggtccaaatggaggcatcacaaatttcgacaac
tttgcttttgctatgctaacagtttttcagtgtataaccatggaaggatggactgatgtc
ctttattggatgaatgatgccatgggatatgaattaccttgggtctattttgtcagtctc
gtcatctttggatcttttttcgttcttaatcttgtacttggtgtattgagcggtgaattt
tctaaggaaagggaaaaggcgaaggccagaggagactttcagaaactacgtgagaagcag
caacttgaagatgacctcaaaggatatctggattggatcactcaggcagaagacattgat
cctgagaatgaagaagacattgagagtgcagagagacgaaatccaaatatccctattggt
gaaactgaatctgataacacagaccatgctggcagtggagagggtgataatgcaacatgc
tgtggatcattatgcatccgaatttctaaatcaaagttcagccggcactggcgtcgttgg
aaccgctattggagaagaaaatgtcgagctggtgtaaagtctgttactttctactggcta
gttattatccttgtttttctcaatacattaaccatttcatcagagcattataatcagcct
ctttggctaacgtttactcaagacattgcaaataaagtcctactggctctattcacatgc
gagatgttagtgaaaatgtacagcctgggtctgcaggcatactttgtttccctttttaat
cgctttgattgctttgtggtgtgtggaggaatcattgaaaccatcctggttgagtttgaa
attatgtctcctttgggaatctcagtatttagatgtgttcggcttctaagaatattcaaa
gtgacaaggcactggcaatcattgagtaacctggtagcctcattattgaactcaatgcga
tccattgcttccttgctgctcctgcttttcctatttattattatctttgcactgctggga
atgcaactttttggtggcaaatttaactttgatgaaacacaaacaaaacggagtaccttt
gataactttccacaagctcttctcactgtatttcagattttaactggtgaagattggaat
atggtgatgtatgatggaattatggcgtatggtggaccatcctcttcagggatgatagtt
tgtatatactttatcattctgttcatatgtggtaactacatcttgctgaatgtctttttg
gccatcgctgttgataatttagctgatgctgaaagcttaaataccgtgcaaaaagaaacc
gaggaagaaaaagaaaggaaaagaagtgccagaactgccagttcagagcaaagagtggat
gggaaatatgaacttgatggaataagcgaaaacaatgacaggaaagtacttactggcact
cagatttcagttgatgaagatgataaggatccttatccacccactgatgtgccagatgat
gatgatgaaccagaaataccagttggacctcgacctcaaagactggcagacctgaacttg
aaggaaaaaattgtgcctattccagaagggagtgctttcttcatattcagtaataccaat
ccgatcagagtggcttgtcacagacttataaatcaccacatctttacaaatctgatcctc
gtgttcattattcttagcagcatttccttagctgcagaagatcctatacgtaatcattcc
tttcgtaataatattcttggttactttgactatgcttttacagcgatctttactgttgaa
atcctgttcaagatgatgacatatggagcatttttacataaaggttccttctgtcgaaat
tatttcaacttgttggacatcctagttgtgggagtgtcacttatttcttttggaattcag
tctagtgctatttcagtcgtgaagatccttcgtgttctgagagtgttaaggcctcttcga
gcaatcaacagggcaaagggactcaagcatgttgttcaatgtgtgtttgttgctattcgg
accattggcaacatcatgattgttacaactcttctgcagttcatgtttgcttgtattggg
gtgcagctattcaagggcaaattctatcgttgtacagatgaagcaaaacaactccctgaa
gagtgcaagggaacttatattctttataaagatggcgaagtagatcatcctgtaattcgt
gatcgagtttggcacaatagcgattacaattttgacaatgtccttgcagctatgatggca
ttgtttacagtatcaacctttgaaggctggccagccctgctatacaaagccatagactca
aacggagaaaatattggccccatctacaacaatcgagtggagatttctatattctttatc
atctacatcattattattgctttcttcatgatgaatatctttgttggttttgtgatcgtc
acattccaggagcagggagaactggagtataaaaactgcgagttggacaaaaatcagagg
cagtgtgtagaatatgctctgaaggccaggccgcttcgcagatacatcccaaagaacccc
taccagtacaaattttggtatgtggtaaactcaactgggtttgaatacatcatgtttgtc
ctcatcatgttgaacacgctttgcttggctgtacagcactatgaacaatctccatttttc
aactacacaatggatatcctcaacatggtcttcactgcagtgtttactgttgagatggtt
ttgaagcttatagcttttaagccgatgggctattttagtgactcctggaacgtgtttgac
ttcctcatcgttattggcagcattatagacgtcgtacttggtgaacttgatgtgagtact
gggacaagtggtcagatctttttgtcttctggatgtggaaattcagaggaaagttccaga
atttcgattaccttcttccgtctcttccgtgtaatgcgattggtcaaactactgagtcgt
ggtgaaggcatacgcacattgttatggactttcatcaagtcctttcaggctcttccgtat
gttgcccttcttatagccatgctgtttttcatctatgccgtaattggcatgcagattttt
ggcaaagttgccttgcaagatcatacacagataaacagaaataacaactttcagaccttt
ttccagtctgttctacttcttttcaggtgtgccactggtgaagcctggcaagagatcatg
ttggcatgcatgcctggaagacgctgtgacccagagtcagaatatggtccgggcgaagag
tttacatgtggtagcaactttgctatcgtatatttcatcacgttttacatgttatgcgcc
tttttgattataaacttatttgtggctgttatcatggacaactttgattatttaacacgc
gattggtccattctgggtcctcatcatttggaagaatttaaaagaatatggtctgaatat
gatccagaagcaaaagggagaataaaacatcttgatgtagttactttacttcgacgtatt
cagccaccactgggctttggaaaactttgtcctcatagagtcgcatgcaagagattggta
gctatgaatatgcccctgaatagtgatggaacggtaatgttcaatgcaaccctttttgcc
ttggtgagaacagctttgaaaatcaaaacagatggtaacctagatcaagctaatgaggag
ctgagagctgttattaaaaaaatctggaagcgaacgagtatgaagttgctagatcaagtg
gtccctccggctgatgatgatgaggtaaccgtggggaagttctatgccaccttcctgata
caggactactttaggaaattcaagcgacgtaaggaacaaggcttggtaggaaagcaaccc
agaaagaatactacagttgctcttcaggctgggcttagaactctacatgacatgggacca
gaaattcgtagagcaatttcatgtgatctacaggaagaggatattattgaggggactcaa
gaagaggatgaggatatatacagaagaagtggtggcctgtttggcaaccatgtcaaccat
gtccctggaaaagaacaaaacttcgtccagcaaacaaatgttacacagcggcccctgcaa
gttaaacgaccctcaactccaccaataaccgattctgaaaaatcacttcctttgtccaac
cttgagaattctatatcacataaccaatttaatcacagtttttcgggaaaggtatcacca
aattccactaatgtcaatctcaataatgccaatgtgtccaaaattgcaaatggaaagcac
cccaggtcgttaaaacataagcaagccactggtaaaaattgcaactcccacacatcgtac
attgaaaaaccaaagaagtcaagcagcagaagatctgattcaggtgatggttttgtgcct
accgtttctcaagaggaaccaaagccagatgactggtttgaggatgagcagtattcagga
gatcaggaatattttagtggggaggagtattatgaagaagacagcatgcagtcagtggat
aggcaaatacatagtgactatcagaatcaaattcaaagtaatgacctggattttgaaaga
ccaaagggttaccatcacccctgtggttactatgaggaagatgagccgagcagttatgct
ggataccggcgctcacctaagcgacgattgcttccaccaacacctatagcaaatcgaagg
ccctctttcaattttgagtgtctacgcagacaaaatagtcaagatgatgtctcactatcg
cctatattccaacagcgtacggctcttccactacatttaatgcaacaccaggttatggct
gtggcaggaatggattcttacaaaagtagaagactgtcaccagcacgatcaacacggtca
tgggcaacacctcctgctacaccacccagcaaagagcgctctccatactacactcctctg
atccgtgtagatcgtgttgaatccagagaaaatatgaatagtaatcctccctcaatgagc
aggagctcttggtataccgacgatattgacattccttacaaaatctatacaccatcaaat
ctagctgttcccaataacttcttacaacgatattatgacaaacgagggagtgcagacagt
ctggtagaagctgtcctaatatcagaaggtcttggacgatatgcaaaagatccaaaattt
gtttcagttactaaacatgaacttgcagatgcctgtgatatgaccattgatgaaatggaa
agtgccgcgagcaatttattaaatggcaatcttcataatggaactagtggggatgtgttt
cctgttaggaacaggtgtgactatgaattacaagattattacccaggatacagtgatgag
gagacagacactgggatatatgaagaggacctaggtgatgaaatgatatgcatcaccact
ttatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (8)   
   KEGG PATHWAY (8)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (21)   

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