[go: up one dir, main page]
More Web Proxy on the site http://driver.im/
KEGG   Rana temporaria (common frog): 120913821
Entry
120913821         CDS       T07929                                 
Symbol
RXRA
Name
(RefSeq) retinoic acid receptor RXR-alpha isoform X1
  KO
K08524  retinoid X receptor alpha
Organism
rtem  Rana temporaria (common frog)
Pathway
rtem03320  PPAR signaling pathway
rtem04148  Efferocytosis
rtem04920  Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:rtem00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    120913821 (RXRA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rtem03000]
    120913821 (RXRA)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:rtem03310]
    120913821 (RXRA)
Transcription factors [BR:rtem03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    120913821 (RXRA)
Nuclear receptors [BR:rtem03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   120913821 (RXRA)
SSDB
Motif
Pfam: Hormone_recep zf-C4 Nuc_recep-AF1 tRNA_bind_3
Other DBs
NCBI-GeneID: 120913821
NCBI-ProteinID: XP_040180020
Position
9:106243043..106511968
AA seq 481 aa
MDTKHFLPLDFSTQVNSAALNSPGIRGSMTAPLLHPSLSSSGLSPSLGSPTQLHSPLSSP
INGMGPPYSVISSPLGPSMSLSNPGLGYGTGNPQLHSPMNSMGSEDIKPPPGINGILKVP
AHASGPMAAFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDTKDCLID
KRQRNRCQYCRYQKCLAMGMKREGMEHHPSPTTRDRPYPADKAVQEERQRGKDRNENDVE
CSSSANEDMPVEKILEAELAVEPKTETYIEANMGLAPNSPSDPVTNICQAADKQLFTLVE
WAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAG
VGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPSEVEALREKVYASLE
AYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQM
T
NT seq 1446 nt   +upstreamnt  +downstreamnt
atggacaccaaacatttcctgcctctggatttctccacccaggtcaattccgcggccttg
aactctccaggtattcgtggttctatgaccgcacctctgctccatccatccttaagcagc
tctgggctcagcccgtcgctgggatcacccactcaacttcactcgccccttagttcacct
atcaatggaatgggcccgccgtactccgttatcagctcacctctgggcccatcaatgtcc
ctctccaaccctggccttgggtatggcactggcaatcctcagcttcattcccccatgaac
tcgatgggctccgaggacatcaaaccccctccaggaatcaacggcatcctgaaagtgcca
gcacatgcctccggccccatggcagccttcactaaacatatctgcgccatctgtggggac
agatcatcaggtaaacactatggagtctacagctgtgagggctgcaagggcttctttaag
aggacagttcggaaggaccttacctacacatgcagggacaccaaggactgcctgatcgac
aagagacaacgcaaccgctgccagtactgccgctaccagaagtgtctggccatgggcatg
aagcgtgaagggatggagcatcatccatccccgactacaagagatcgcccgtatccggcg
gataaagctgtgcaggaggagcgtcagcgggggaaagacagaaatgagaatgacgtggaa
tgttcaagtagtgctaatgaagatatgccggtagaaaagattctggaggcggaactggct
gtggagccaaagaccgaaacttacatcgaagccaacatgggcctcgcccccaattctcct
agtgaccccgtcaccaacatttgccaagccgcagacaagcagctattcaccttggtagaa
tgggcaaagagaatcccccacttttcagagctgccgctggatgatcaagtaatactgctg
agagcaggttggaatgaactccttatcgcctccttctcacatcggtcaatagctgttaaa
gacgggattctcctggccactggtcttcatgtgcaccggaacagtgcgcacagtgcaggt
gtaggagccatctttgatcgtgttctgacagaactagtgtccaaaatgcgagacatgcag
atggacaagacagagctggggtgcctccgagcaatcgtccttttcaacccagattctaaa
ggtctctcaaacccatcggaggtggaggcactgcgggagaaggtctatgcatctttggaa
gcttactgcaagcataaataccctgaacagccaggaaggtttgcaaagctactgttgcgt
ctacctgccctccgttccatcggcctgaaatgtctggaacatctctttttcttcaagcta
ataggagacacaccaatcgacaccttcttaatggagatgctggaagctcctcatcaaatg
acttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

Download RDF
DBGET integrated database retrieval system