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KEGG   Polyodon spathula (Mississippi paddlefish): 121322891
Entry
121322891         CDS       T07273                                 
Symbol
desmb
Name
(RefSeq) desmin b isoform X1
  KO
K07610  desmin
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    121322891 (desmb)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:pspa04812]
    121322891 (desmb)
Cytoskeleton proteins [BR:pspa04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Type III
     121322891 (desmb)
SSDB
Motif
Pfam: Filament Filament_head DUF7491 GAS Laminin_II DUF1664 ATG17_like DUF4515 DUF2935 Baculo_PEP_C HAUS-augmin3
Other DBs
NCBI-GeneID: 121322891
NCBI-ProteinID: XP_041119370
Position
11:26194737..26214285
AA seq 461 aa
MSQSYSSSQRASSYRRTFGGGAAASPQFSRASYSSRGAGSATSASRVYQVSKSLASPSFS
SYRASRVAPLRAYGGETLDFSLADAMNQEFLQTRTNEKAELQHLNDRFVNYIEKVRFLEQ
QNQTLVVEIERLKGREPTRVAEIYEEEMRELRRQVDILTNQRGRVEVERDNLADDLQKIK
QRLQEEIQQKEDAENNLAAFRADVDAATLARIDLERRIESLHEEIAFLRKIHEEEILELQ
AQLQETHVQVEMDMSKPDLAAALKDIRSQYENIAAKNIQEAEEWYKSKVTDLTQAASKNN
DALRQTKQEVMEYRHQIQSYTCEIDSLKGTNDSLMRQMREMEERFAGEASGYQDNISRLE
AEIANMKDEMARHLREYQDLLNVKMALDVEIATYRKLLEGEENRVSLPVQSFSSLSFRET
SPGQHQRKSEVHSKKSVVIKTIETRDGEVVSESTQQQHDSI
NT seq 1386 nt   +upstreamnt  +downstreamnt
atgagccaatcttactcttccagccagagggcatcctcttacagaagaacctttggaggg
ggcgccgctgcttccccacagttctccagggcctcgtactccagccgtggggccggcagt
gccacttctgcatccagagtctaccaggtgtccaagagcttagcctcccccagcttctcc
agctacagggccagtcgggtggcccccctccgagcctatggtggtgagaccctggacttc
agcctggctgatgcgatgaaccaagagttcctccaaacacggaccaatgagaaggctgag
cttcagcacctgaatgatcgcttcgtgaactacattgagaaggttcgcttcttggagcag
cagaaccagaccctggtggtggagatcgagcgactgaagggccgggagccgacgcgtgtg
gctgagatctacgaggaggagatgagggagctccgcaggcaggttgacatcctcaccaac
cagaggggacgcgttgaggtcgagagggacaacctggctgatgacctgcaaaagatcaag
cagagacttcaggaagagattcaacaaaaggaagatgctgagaacaacttggcagccttc
agagcagatgtggatgccgccaccctggcccggattgatctggagaggcgcatcgagtcc
ctgcacgaggagattgccttcctcaggaaaatccatgaggaggaaatccttgagctgcag
gctcagcttcaggagacccatgttcaagtggagatggacatgtccaagcctgacctggct
gctgccctgaaggacatccgtagtcaatatgagaacatcgccgccaagaacatccaggag
gcagaggagtggtacaagtctaaggttacagacctcacccaagctgcttccaagaataat
gatgccctgcgccagaccaagcaggaggtgatggagtaccgccaccagatccagtcctac
acctgcgagatcgactcgctcaagggaacgaatgattccctgatgcgccagatgagggag
atggaggagcgcttcgcgggggaggcgtcaggttaccaggacaacatcagccggctggag
gcggagattgccaacatgaaggatgagatggcacgccacctgcgtgagtaccaggacctg
ctcaatgtcaagatggctctggatgtggagatcgccacctacaggaagttgctggaagga
gaggagaacagggttagtcttcctgtacaatcattctcttcattgagttttagagagacc
agccccggacagcaccagcgcaagtctgaggttcactccaagaagtcagtcgtcatcaaa
accattgagacccgtgatggggaggtcgtcagcgagtctacacagcagcagcatgactca
atctaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (11)   
   Pfam (11)   
All databases (17)   

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