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KEGG   Polyodon spathula (Mississippi paddlefish): 121315072
Entry
121315072         CDS       T07273                                 
Name
(RefSeq) histone deacetylase 9-like isoform X1
  KO
K11409  histone deacetylase 9 [EC:3.5.1.98]
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pspa03036]
    121315072
Enzymes [BR:pspa01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     121315072
Chromosome and associated proteins [BR:pspa03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     121315072
SSDB
Motif
Pfam: HDAC4_Gln DUF2244
Other DBs
NCBI-GeneID: 121315072
NCBI-ProteinID: XP_041104901
Position
4:89564346..89780330
AA seq 617 aa
MLQTIYESESCFSSDGVSGREQFLAQHRMHSMISSVEIKQEIPSGLESVTPLDLRTDLRM
MMPVVDTTLQEKQLQHELLLIQKQQQIQKQLLITEFQKQHENLMRQHQAQLQEHIKLQQE
LLAMKQQQELLEKERKLEQQRQEQEIELQRREQQFLSLRGRGRESAVASTEVKQKLQEFL
LSKSKDPAANGNNQSLGRHPKLWYMAAHHTSLDQSSPPLGVTSPSYKYTLPGTHASKDDF
PLRKTASEPNLKVRSRLKQKVAERRSSPLLRRKDGNVINPYRKRTYDVTDTSASSSAPGS
GPSSPNSGSPGIGPDNATSVLPAMAHTEHLLSHQRVLKPEESMTLLSLYTSPSLPNITLG
LPAASSPINAATTLKEQHGDATMQAMRQALPGQYLGAGPLSSGLPPVALEAKVNNSHQAL
LQHLLLKEQMRQQKSLTNVQGAVPVHPQSPLAMKDRPASSVRHKLPRHRPLNRTQSAPLP
QSTLAQLVIQQQHQQFLEKQKRYQQQIQINKMLSKSIEQLRQPSSHLEETEEENHKDQPM
QEDKEPPCGSFMNCSTSSSCEGEVPRAHLGVIKVKEEPRDSDDESLSNQSEAAEQMVFMQ
KVKGKDFARRLVIKALI
NT seq 1854 nt   +upstreamnt  +downstreamnt
atgctgcagacaatttacgagagtgaatcgtgtttctcctcagatggggtttctggacga
gagcagttcttggctcagcacagaatgcacagcatgatcagttcagtggaaataaagcag
gaaattcctagtggcctggagtctgtcacaccactggaccttcgcacagacctcaggatg
atgatgccagtggtggataccacgctgcaggagaagcagttacagcatgaattactcctg
atccaaaaacaacaacagattcaaaaacagctcctgatcaccgagttccaaaaacagcac
gaaaacctgatgaggcagcatcaagcccaacttcaggagcacatcaagttacaacaggag
ctgcttgccatgaaacaacagcaagagcttttggagaaagaacgcaagcttgagcaacag
agacaggaacaggaaatcgaactgcagcgccgagagcaacagttcctctctctccggggc
aggggcagagaaagtgccgtagccagcactgaagttaagcagaaactgcaggagttcttg
ttaagcaaatctaaagatcctgcagcaaatggaaataatcagtccctgggccgccacccg
aagctgtggtacatggctgcccatcatacttcattagatcagagctcacctcctcttggt
gtgacatcaccgtcatacaagtacacactgccaggaacacatgcttcaaaagatgatttt
ccattaagaaaaacagcttctgaacccaatctgaaagtgcgttcgcgattaaaacagaaa
gtggcagagagaaggagcagtccgttgctaaggaggaaagatggaaatgtgataaatcct
tacagaaagagaacatatgatgtgacagatacatcagcaagcagcagtgccccaggatcc
ggtcccagttctcctaacagtggatcccctggaattggaccagataatgcaacctcagtt
ctaccagccatggctcacactgagcatctcctttcacatcaaagggtcttgaagcctgaa
gaatcgatgaccttgttaagtctgtacacatccccctcgttacccaatattactttggga
cttccagctgcatcctcaccaataaatgctgccaccacattgaaagaacaacatggtgac
gccaccatgcaggccatgaggcaggctcttccaggacagtacctgggagctgggcctctc
tcgtctggccttccaccagtggcattggaagcaaaggtgaataacagccaccaggccctg
cttcagcatctgttactaaaggaacaaatgcggcagcagaagagtcttacaaacgttcaa
ggtgcggtccctgtccaccctcagtctcccttggcaatgaaagacagaccagcctcaagt
gtcagacacaagctgcctcgccatcggcctctgaacagaacgcagtcagccccactgcca
cagagcaccttggcacagctggtcatccagcaacagcaccagcagttcctggagaagcag
aagcgataccagcagcagattcagataaacaaaatgctttcgaaatccattgagcaactc
agacagccaagcagtcacctggaggagactgaggaagagaaccacaaagatcagccaatg
caggaggacaaggagcccccctgtggcagcttcatgaactgcagcaccagcagcagctgc
gagggagaggttcccagagcacacctgggagttatcaaagtgaaagaagagccccgagac
agtgatgacgaaagcctaagcaatcaaagtgaggccgcggagcagatggtgtttatgcaa
aaggtaaaggggaaagattttgctcggaggttggtcattaaagctcttatttga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (5)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (2)   
   Pfam (2)   
All databases (20)   

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