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KEGG   Phocoena sinus (vaquita): 116759256
Entry
116759256         CDS       T07759                                 
Symbol
CHPF2
Name
(RefSeq) chondroitin sulfate glucuronyltransferase isoform X1
  KO
K03419  chondroitin polymerizing factor 2 [EC:2.4.1.226]
Organism
psiu  Phocoena sinus (vaquita)
Pathway
psiu00532  Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
psiu01100  Metabolic pathways
Module
psiu_M00058  Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
    116759256 (CHPF2)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:psiu01003]
    116759256 (CHPF2)
Enzymes [BR:psiu01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.226  N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
     116759256 (CHPF2)
Glycosyltransferases [BR:psiu01003]
 Glycan extension
  O-Glycan
   116759256 (CHPF2)
SSDB
Motif
Pfam: CHGN Fringe
Other DBs
NCBI-GeneID: 116759256
NCBI-ProteinID: XP_032498670
Ensembl: ENSPSNG00000005227
Position
9:complement(5934459..5942486)
AA seq 772 aa
MRLSSVLALLQPALPLILGLSLGCSLSLLRVSWIQGEGEDPCVVAVGEPGGPQNLDSGTQ
LDQSDEDFKPRIVPYYRDPNKPYKKVLRTRYIQTELGSRERLLVAVLTSRATLSTLAVAV
NRTVAHHFPRLLYFTGQRGARTPAGMQVVSHGDERPAWLMSETLRHLHTHFGADYDWFFV
MQDDTYVQAPRLAALAGHLSINQDLYLGRTEEFIGAGEQARYCHGGFGYLLSRSLLLRLW
PHLDGCRGDILSARPDEWLGRCLIDSLGIGCVSQHQGQQYRSFELAKNRDPEKEGSSAFL
SAFAVHPVSEGTLMYRLHKRFSALELERTYSEIEQLQAQIRNLTVLTPEGEAGLSWPIGL
PAPFTPHSRFEVLGWDYFTEQHTFSCADGAPKCPLQGASRADVGDAVETALEQLNRRYQP
RLRFQKQRLLNGYRRFDPARGMEYTLDLLLEAVTQRGHRRSLARRVSLLRPLSRVEILPM
PYVTEATRVQLVLPLLVAEAAAAPAFLEAFAAGVLEPREHALLTLLLVYGPREGGRGAPD
PFLGVKAAAAELERRYPGTRLAWLAVRAEAPSQVRLLDVVSKKHPVDTLFFLATVWTRPG
PEVLNRCRMNAISGWQAFFPVHFQEFSPALAPQRSPQGPPGAGPDPPSPPGAEPARGAPV
GGRFDRQASAEGCFYNADYLAARARLAGELAGQEEEEALEGLEVMDVFLRFSGLHLFRAV
EPGLVQKFSVRDCSPRLSEELYHRCRLSTLEGLGARAQLAVALFEQEQANST
NT seq 2319 nt   +upstreamnt  +downstreamnt
atgcgactgagctcagtgttggctctgctgcaaccagcactgcccctcatcctagggctg
tctctggggtgcagcctgagcctcttgcgggtttcctggatccagggtgagggagaagat
ccctgtgtagtggctgtgggggaaccaggagggccgcagaatctagactcaggaactcag
cttgaccaaagtgatgaagacttcaaaccccggattgtcccctactacagggatcccaac
aagccctacaagaaggtgctcaggactcggtacatccagacagagctgggctctcgcgag
cggttgctggtggctgtcctgacctcccgggccacactgtccactctggctgtggctgtg
aaccgcacggtggctcaccacttccctcggttactctacttcactgggcagcgaggggcc
cggactccggcagggatgcaggtggtatctcacggggacgaacggccagcctggctcatg
tccgagaccctgcgccatcttcacacacactttggggccgactacgactggttcttcgtc
atgcaggatgacacgtatgtgcaggccccccgcctggcagccctggctggccacctcagt
atcaaccaagacctgtacctgggccggacggaggagttcattggcgcaggcgagcaggcc
cgatactgccacgggggctttggctacctcttgtcacggagcctcctgcttcgattgtgg
ccgcatctggatggctgccgaggagacatcctcagtgcccgtcctgatgagtggcttggc
cgctgcctcattgactctctgggcatcggctgtgtctcacagcaccaggggcagcagtat
cgctcgtttgaactggccaaaaatagggaccccgagaaggaggggagctcggctttcctg
agtgcttttgcggtgcaccctgtctccgagggaaccctcatgtaccggctccacaagcgc
ttcagtgctctggagctggaacgaacgtacagtgaaatagaacagctgcaggctcagatc
cggaacctgaccgtgctgacccctgagggggaggcaggcctgagctggcccattgggctc
ccggccccttttacaccacactctcgttttgaggtgctgggctgggactacttcacagag
cagcacaccttctcctgtgcagacggggcccccaagtgcccactgcaaggggctagcagg
gcagatgtgggcgacgccgtggagactgctttggagcagctgaatcggcgctatcagccc
cgcctgcgcttccagaagcagcggcttctcaacggctaccggcgctttgacccagcgcgg
ggcatggagtacaccctggacctgctgctggaagccgtgacgcagcgcgggcaccggcgg
tccctggcccgcagggtcagcctgctgcggcccctgagccgggtggagatcctccccatg
ccctacgtcaccgaggccacccgcgtgcagctggtgctgccgctgctggtggctgaagcc
gccgcggcccctgcgttcctggaggcctttgcagccggtgtcctggagccgcgagagcat
gccctactcaccctgttgctggtctatgggccgcgggaagggggccgaggggccccggac
ccgtttcttggggtgaaggctgcagcggctgagttggaacgacggtaccctgggacgagg
ctggcctggctcgctgtgcgcgcggaggccccttcccaggtgcggctcctggacgtggtc
tccaagaagcaccccgtggacacgctcttcttcctcgccaccgtgtggaccaggcccggg
cccgaggtcctcaaccgctgccgcatgaacgccatctccggctggcaggccttcttcccg
gtccacttccaggagttcagccccgccctggcaccacagagatctccccaagggcccccg
ggggccggccccgaccccccgtcccctcctggtgctgagcctgcccggggggctcccgtt
gggggcaggtttgaccgacaggcttccgcagagggctgcttctacaacgctgactacctg
gcggcccgagcccggctggctggtgagctggcgggccaggaagaggaggaagccctggag
gggctggaggtgatggatgttttcctccggttctcagggctccaccttttccgggccgtg
gagccagggctggtgcagaagttctccgtgcgtgactgcagccctcggctcagcgaggag
ctctaccaccgctgccgcctgagtaccctggaggggctgggggcccgcgcgcagctcgct
gtggctctgttcgagcaggagcaggccaatagcacgtag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (25)   

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