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KEGG   Phocoena sinus (vaquita): 116755712
Entry
116755712         CDS       T07759                                 
Symbol
TPM2
Name
(RefSeq) tropomyosin beta chain isoform X1
  KO
K10374  tropomyosin 2
Organism
psiu  Phocoena sinus (vaquita)
Pathway
psiu04260  Cardiac muscle contraction
psiu04261  Adrenergic signaling in cardiomyocytes
psiu04814  Motor proteins
psiu04820  Cytoskeleton in muscle cells
psiu05410  Hypertrophic cardiomyopathy
psiu05414  Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    116755712 (TPM2)
   04820 Cytoskeleton in muscle cells
    116755712 (TPM2)
 09160 Human Diseases
  09166 Cardiovascular disease
   05410 Hypertrophic cardiomyopathy
    116755712 (TPM2)
   05414 Dilated cardiomyopathy
    116755712 (TPM2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:psiu04812]
    116755712 (TPM2)
Cytoskeleton proteins [BR:psiu04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Tropomyosins
     116755712 (TPM2)
SSDB
Motif
Pfam: Tropomyosin CLZ ERM_helical Snapin_Pallidin TMF_DNA_bd Laminin_II RasGAP_C PUMA_CC Suppressor_APC XhlA DUF745
Other DBs
NCBI-GeneID: 116755712
NCBI-ProteinID: XP_032491442
Ensembl: ENSPSNG00000016059
Position
6:37091878..37099597
AA seq 285 aa
MDAIKKKMQMLKLDKENAIDRAEQAEADKKQAEDRCKQLEEEQQALQKKLKGTEDEVEKY
SESVKDAQEKLEQAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAA
DESERGMKVIENRAMKDEEKMELQEMQLKEAKHIAEDSDRKYEEVARKLVILEGELERSE
ERAEVAESRARQLEEELRTMDQALKSLTASEEEYSTKEDKYEEEIKLLEEKLKEAETRAE
FAERDLGQCQGGERGDPPDPRPDPAGAQQPVRAGPAPSQAVVATK
NT seq 858 nt   +upstreamnt  +downstreamnt
atggacgccatcaagaagaagatgcagatgctaaagctggacaaggagaatgccatcgac
cgcgctgagcaggctgaggccgacaagaagcaagctgaggaccgctgcaagcagctggag
gaggagcagcaggccctccagaagaagctgaaagggacggaggacgaggtggaaaagtat
tccgaatcagtgaaggatgcccaggagaaactggagcaggctgagaagaaagccaccgat
gccgaggcagatgtggcctccctgaaccgccgcattcagctggtagaggaggagttggac
cgggcgcaggagcgcctggctacagccctgcaaaagctggaggaggctgagaaggcagct
gatgagagtgagagaggaatgaaggtcatcgaaaaccgagctatgaaggatgaggaaaag
atggagctgcaggagatgcagctgaaggaggccaagcacatcgctgaggattcagaccgc
aaatatgaggaggtggccaggaagctagtgatcctggaaggagagctggagcgctcagaa
gagagagctgaggtggctgagagccgagccaggcagctggaggaggaactgcgaaccatg
gaccaggccctcaagtccctgacggcctcagaggaggagtattccaccaaagaagataaa
tatgaagaggagatcaaactgctggaggagaagctaaaggaggctgagacccgagcagag
tttgccgaaagagaccttggccagtgccaaggaggagaacgtggagatccaccagaccct
cgaccagaccctgctggagctcaacaacctgtgagggctggccctgcccccagccaggct
gtagttgccaccaaataa

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (8)   
   RefSeq(pep) (8)   
DNA sequence (13)   
   RefSeq(nuc) (13)   
Protein domain (11)   
   Pfam (11)   
All databases (35)   

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