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KEGG   Pyrgilauda ruficollis (rufous-necked snowfinch): 121350503
Entry
121350503         CDS       T07608                                 
Symbol
SCN4A
Name
(RefSeq) sodium channel protein type 4 subunit alpha
  KO
K04837  voltage-gated sodium channel type IV alpha
Organism
pruf  Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:pruf00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:pruf04040]
    121350503 (SCN4A)
Ion channels [BR:pruf04040]
 Voltage-gated cation channels
  Sodium channel, voltage-gated (Nav)
   121350503 (SCN4A)
SSDB
Motif
Pfam: Ion_trans Na_trans_assoc IQ_SCN5A_C PKD_channel IQ GPHH
Other DBs
NCBI-GeneID: 121350503
NCBI-ProteinID: XP_041317813
Position
Unknown
AA seq 1842 aa
MAGLPHIPGPENLRPFTPASLAAIEQRMAEAEALRIKRQQVEMPEEEEVKPSSDLEAGKN
LPLIYGDPPLELIGTPLEDLDPFYKDKKTFIVLNKGKSIFRFSATPALYMLGPFNPIRRG
AIKVLIHSLFSMFIMITILTNCVFMTLSNPPAWSKNVEYTFTGIYTFESLIKILSRGFCI
DDFTFLRDPWNWLDFMVISMAYITEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGAL
IQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCVRWPPPNSTFLQDLGLDNDTSAN
STFYDFMDDFTGNFTGNFTGNFTGNDTFDFEAYISDEANYYFLEGALDALLCGNSSDAGK
CPEGYECMKAGRNPNYGYTSYDTFSWAFLALFRLMTQDFWENLFQLTLRAAGKTYMIFFV
VVIFLGSFYLINLILAVVAMAYAEQNDATMLEEQQKEEEFQQLMEQLKKQQEEQERLLQE
RSSSSNSLPSSVAGKGHDSDVNSDQDKAKDCNGQVVPKITLQRSDTVVDFNPHEPEKPDL
NHLTVGNQDGPGLEKRVGSAISVISNAVEELEEAHQKCPPWWYKFAHTFLVWNCCRPWVK
LKEFVKLVVMDPFVDLGITICIVLNTLFMAMEHYPMTEEFENVLSVGNLVFTGIFTAEMV
LKLIALDPYEYFQQGWNIFDSFIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTL
NMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYIECVCKISVDCTLPRWHMND
FFHSFLIVFRILCGEWIETMWDCMEVAGQTMCLIVFMMVMVIGNLVVLNLFLALLLSSFS
ADSLAASDDDGELNNLQIAIGRITRGIALAKATLLALLRRLWKGKKVAPEEEQDPSKRDN
SVLNHVDTALEPKSGYLDGITGKEHIFMDELDHMNFINNPNLTVQVPIASEESDLYEETS
TQSDTEDTTKNPLCSDNASSVCSTVDYKPPAPEEEEVAEEAEEGNEPEECFTEGCVKRFP
CLYVDITSEKGKIWWNLRKTCFRIVEHDWFETFIVFMILLSSGALAFEDIYIEQRKVIRT
ILEYADKVFSYIFVIEMLLKWVAYGFKVYFTNAWCWLDFLIVDVSLVSLTANWLGYSELG
AIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFA
GKYYRCVNTTTGELFDIDVVNNKSDCMALLHTNEVRWVNVKVNFDNVGLGYLSLLQVATF
KGWMDIMYAAVDSREIEEQPQYEINLYMYIYFVIFIIFGAFFTLNLFIGVIIDNFNQQKK
KFGGKDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPANKFQGKVFDFVTKQVFDITIMILI
CLNMVTMMVETDDQSELKTSVLYKINLVFIVIFTGECVLKMFALRHYFFTVGWNIFDFVV
VILSILGIVLSDIIEKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALF
NIGLLLFLVMFIYSIFGMSNFAYVKKESGIDDIFNFETFGNSMICLFQITTSAGWDGLLN
PILNSGPPDCDPELENPGSSVKGDCGNPAIGIFFFCSYIIISFLIVVNMYIAIILENFSV
ATEESSEPLCEDDFEMFYETWEKFDPDATQFIAYSTLSDFVDTLQEPLRVPKPNKIKLIT
MDLPMVAGDKIHCLDILFALTKEVLGDSGEMDALKATMEEKFMAANPSKVSYEPITTTLK
RKHEEVCATKIQRAFRRYLLRRSVKQASYMYRHSQDALGEDAPEKEGLIATKMQEIYGNT
GTDVDTAPALGLEPIPSSETPQDAPEEARAWGKEHVVKESLV
NT seq 5529 nt   +upstreamnt  +downstreamnt
atggccggcctgccgcacatcccgggccccgagaacctgcgccccttcaccccggcctcg
ctggccgccatcgagcagcgcatggccgaggccgaggcgctccggataaagcggcagcag
gtggagatgcctgaggaagaggaggtcaagcccagcagtgacctggaagccggcaagaac
ttgcccctcatctatggtgacccacccctggagctgatcgggacccccctggaggacctg
gaccctttctacaaggacaagaagacgttcatagttctcaacaagggcaagtccatcttc
cgcttctcagccacccctgccctctacatgctggggcccttcaaccccatccgcagagga
gccatcaaagtcctcatccattcattattcagcatgttcatcatgatcaccattttaacc
aactgcgtgtttatgacgctgagcaaccccccggcgtggtctaagaatgtggaatacacc
ttcactgggatctacacctttgagtctctcatcaagatcctctcaagaggtttctgcatc
gacgacttcacattcctgcgtgacccgtggaactggctggacttcatggtcatctccatg
gcctacattaccgagttcgtggacctggggaacatctctgctctcaggactttccgtgtt
ctccgtgccttgaaaaccatcacggtgataccagggctgaagacgatcgtgggggctctg
atccagtcggtgaagaagctctcggacgtgatgatactcacggttttctgcctgagcgtc
tttgccctcatcggcctccagctcttcatgggcaacctccggcagaagtgtgtgcgctgg
cctccccccaacagcaccttcctgcaggatctggggctggacaacgacacctcggccaac
tccaccttctacgacttcatggatgacttcaccgggaacttcacggggaacttcaccggg
aacttcaccgggaacgacaccttcgacttcgaggcctacatcagcgatgaagccaattac
tacttcctggagggagccctggatgccctgctctgcgggaacagcagcgacgctgggaag
tgccccgagggctacgagtgcatgaaggccggcaggaacccgaactatggctacaccagc
tacgacaccttcagctgggccttcctggccctcttccgcctcatgacccaggacttctgg
gagaacctcttccagctgacactgcgggcagcagggaaaacctacatgatcttcttcgtg
gtggtcatcttcctgggctccttctacctcatcaacctcatcctggccgtggtggccatg
gcctatgctgagcagaacgacgccaccatgctggaggagcagcagaaggaggaggaattc
caacagctcatggagcagctgaagaagcagcaagaggagcaggaaaggctgttgcaggag
cgctcgtccagcagcaattccctgcccagcagcgtggccgggaaggggcacgactccgac
gtgaacagcgaccaggacaaggccaaggactgcaacgggcaggtggtgcccaagatcacc
ctgcagagatccgacaccgtggttgatttcaacccccatgagccggagaagccagacctc
aaccacctcactgtgggcaaccaggatgggccagggctggagaagagggtgggaagtgcc
atcagtgtcatctccaacgctgtggaagagctggaagaagctcaccagaaatgcccaccc
tggtggtacaaattcgcccacacattcctggtctggaactgctgccgcccgtgggtgaag
ctgaaggagtttgtcaagctggtggtgatggaccccttcgtggacctcggcatcaccatc
tgcatcgtgctcaacactctcttcatggccatggagcactaccccatgacggaggagttc
gagaacgtgctgagcgtggggaacctggtcttcacagggatcttcacggcagagatggtc
ctgaagctcattgctctggatccctacgagtatttccagcagggctggaacatctttgac
agcttcatcgtcactctgagtctggtggagctgggcctggccaacgtgcaggggctctcc
gtgctccgctccttccgcctgctgagggttttcaagctggccaagtcctggcccactctc
aacatgctcatcaagatcatcggcaactccgtgggtgccctgggcaacctcacgctggtt
ctggccatcatcgtcttcatcttcgccgtggtggggatgcagctcttcggcaagagctac
atcgagtgcgtgtgcaagatctctgtggactgcaccctgccccgctggcacatgaatgac
ttcttccactccttcctcatcgtcttccgcatcctctgcggggagtggatcgagaccatg
tgggactgcatggaggtggcgggccagaccatgtgcctcatcgtcttcatgatggtcatg
gtcatcggcaacctcgtggtgctgaacctgttcctggctctgctgctgagctccttcagc
gccgacagcctggcggcgtcggacgacgacggggagctgaacaacctgcagatcgccatc
ggccgcatcacgcgcggcatcgccctcgccaaggccacgctgctggcgctgctgcgccgc
ctctggaagggcaagaaggtggcaccggaggaagagcaggaccccagcaagagagacaac
tccgtgctcaaccacgtggacacggccctggagcccaagtcagggtacctggatggcatc
acgggcaaggagcacatcttcatggatgagctggaccacatgaacttcatcaacaacccc
aacctgacggtgcaggtccccatcgcctctgaggagtccgacctctacgaggagaccagc
acccagtctgacaccgaggacaccaccaagaaccccctgtgcagcgacaacgcctcgtcc
gtgtgcagcacggtggattacaaaccccccgcgcccgaggaggaggaggtggcagaggag
gctgaggagggcaacgagcccgaggagtgtttcactgaaggctgtgtgaagaggttcccc
tgcctctacgtggacatcaccagtgagaaggggaagatttggtggaacctcaggaaaacc
tgcttccgcatcgtggagcacgactggtttgagaccttcatcgtcttcatgatcctcctc
agcagtggggcactggctttcgaggacatctacatcgagcagcgcaaggtgatccgcacc
atcctggaatacgcagacaaggtcttctcctacatctttgttatcgagatgctgctcaag
tgggtggcctatggcttcaaggtgtacttcaccaatgcctggtgctggctggatttcctc
attgtggatgtgtccctggtcagcctgacagcaaactggctgggatactctgagctggga
gccatcaaatccctgcggacactgagggctctgcgacccctgcgtgctctgtcccgcttt
gagggcatgagggtggtggtgaacgccctggtgggggccatcccctccatcatgaacgtc
ctgctcgtctgcctcatcttctggctgatcttcagcatcatgggggtgaacctgttcgca
ggcaagtactacaggtgtgtcaacaccaccaccggggagctcttcgacatcgacgtggtc
aacaacaagagcgactgcatggccctgctccacaccaacgaggtcagatgggtcaacgtc
aaggtcaacttcgacaacgtgggcttgggatacctgtccctgctgcaggtggcaaccttc
aaaggctggatggacatcatgtacgcagccgtggactcacgtgagattgaagagcagcca
cagtacgagatcaacctctacatgtacatctacttcgtcatcttcatcatcttcggtgcc
ttcttcaccctgaacctcttcatcggcgtcatcatcgacaacttcaaccagcagaagaaa
aagtttggaggcaaagacatcttcatgacagaagagcagaagaaatactacaatgccatg
aagaagctgggctccaagaaaccccagaagcccatccccaggccagcgaacaaattccaa
gggaaggtgtttgactttgttaccaagcaagtgtttgacatcaccattatgatcctgatt
tgcctgaacatggtgaccatgatggtggaaacagatgaccagagcgagctcaaaacctct
gtcctctacaagataaatctggtcttcatcgtcatcttcactggagagtgtgtgctcaag
atgtttgccctgcgccactacttcttcactgtgggctggaacatctttgacttcgtggtg
gttatcctctccatcctaggtatcgtcctctcagacatcatcgagaagtactttgtgtcc
cccacgctcttcagggtcatccggctggcgaggatcggccgcgtgctgcggctgatccga
ggagccaaaggcatccggacgctcctctttgccctgatgatgtccctgcccgccctgttc
aacatcggcctcctgctcttcctcgtcatgttcatctactccatcttcggcatgtccaac
ttcgcctacgtcaagaaggagtcggggatcgatgacatcttcaacttcgaaaccttcggg
aacagcatgatctgcctctttcagatcaccacgtcagcggggtgggatgggctcctcaac
cccatcctcaacagcggccccccggactgcgaccctgagctggagaaccccgggagttca
gtgaaaggagactgtgggaaccctgccatcggcatcttcttcttctgcagctacatcatc
atctccttcctcatcgtggtgaacatgtacatcgccatcatcctggagaacttcagcgtg
gccacagaggagagcagcgagcccctctgtgaagatgattttgaaatgttttatgaaact
tgggagaagttcgacccagatgccacccagttcatcgcctacagcaccttgtctgacttt
gtggacaccttgcaggagccactcagagttcccaaacccaacaagatcaaactcatcacc
atggatctaccaatggttgctggggacaaaatccactgcctagacatcctctttgctctg
actaaggaagtgctgggagactcgggagagatggatgccctgaaggccaccatggaggag
aagttcatggctgccaacccctcgaaggtttcctatgaacccatcactaccaccctgaag
aggaagcacgaggaggtgtgtgccaccaagatccagagggcttttcggaggtacctcctg
aggcgctcggtgaagcaggcgtcctacatgtacaggcacagccaggacgcgctgggcgag
gacgcgcccgagaaggaagggctgatcgccaccaaaatgcaggagatctatgggaacact
gggacagatgtggacacagcccctgccctgggcctcgagcccattcccagctcagagacg
ccccaggatgctcctgaggaagcacgggcttggggtaaggaacacgtggtgaaagagtcg
ctggtgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (14)   

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