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KEGG   Poeciliopsis prolifica (blackstripe livebearer): 129373702
Entry
129373702         CDS       T09758                                 
Symbol
scn4ab
Name
(RefSeq) sodium channel protein type 4 subunit alpha B isoform X1
  KO
K04837  voltage-gated sodium channel type IV alpha
Organism
pprl  Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:pprl00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:pprl04040]
    129373702 (scn4ab)
Ion channels [BR:pprl04040]
 Voltage-gated cation channels
  Sodium channel, voltage-gated (Nav)
   129373702 (scn4ab)
SSDB
Motif
Pfam: Ion_trans Na_trans_assoc IQ_SCN5A_C PKD_channel GPHH
Other DBs
NCBI-GeneID: 129373702
NCBI-ProteinID: XP_054907723
Position
Unknown
AA seq 1767 aa
MAPLLPPVGAEVFRRFTPASLEEIQRRHEAEEKQQQIRKEQNIEIAEEDLPKPASDLEAG
KPLPFIYGDPPAEFLNIPLEELDPFYQSQKTFIVLSKGNVIYRFNAEPACYVLSPFSPLR
IFSIRILIHSLFSLFIMVTILTNCVFMTMSDPPPWSKTVEYVFTGIYTFEATIKVLSRGF
CMGDFTFLRDPWNWLDFMVISMAYLTEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVG
ALIQSVKKLRDAMILTVFCLSVFALIGLQLFMGNLRQKCVLIPPLLLNDTSEGAFNISSH
ENNSSDFDFYEYINNPDNYYHLPDQLDALLCGNSSDAGTCPDGYMCLKAGRNPNYGYTSY
DSFSWAFLSLFRLMTQDFWENLFHLTLRAAGKTYMIFFVVIIFLGSFYLINLILAVVAMA
YAEQNEANIAEAKQKEEEYAQILEALKQREEEQAAKRAALLENQDPTSQEEHANMEEFED
DQRPCPPCWYVFADIFLKWDCCGCWRWLKKLLYTIVMDPFVDLAITICIVLNTVFMAMEH
YPMTVEFENLLSTGNLVFTGIFTAEMILKLLAMDPYYYFQVGWNIFDSIIVTMSLVELGL
ANVQGLSVLRSFRLMRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGM
QLFGKSYKDCVCRIAEDCELPRWHMNDFFHAFLIIFRVLCGEWIETMWDCMQVAGEPMCL
IVFMMVLVIGNLVVLNLFLALLLSSFSGDNLAVTEDEGENNLQIAINRISRAVAWTKAWF
LKHLLTLAGKKTNVNSDANAVPCEEGEKSKEVLSLTIVNSEHPMVQVPKVDLSFLSSYYQ
NITSLKVPIAEAESDFDMPENEDEEDEDEDEDEDDDEDDIEEQLSQGDESSVCSTVQRAP
EVPKVEEVEEIPEDCFTEKCYNRCPCLDIDTSHSKGKIWFNFRKTCFNIVEHNYFESFII
FMILLSSGALAFEDIYIEQRRVIKIILEYADQVFTYVFVVEMILKWVAYGFKTYFTNAWC
WLDFLIVDVSLVSLTANILGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIP
SIFNVLLVCLIFWLIFSIMGVNLFAGKFYYCFNETSEERFLPEDVNNKTQCLDLIEGSSE
VRWKNTKINFDNVGMGYLSLLQVATFKGWMDIMYAAVDSREVESQPMYEDNLYMYMYFVC
FIIFGSFFTLNLFIGVIIDNFNQQKAKLGGTDIFMTEEQKKYYNAMKKLGSKKPQKPVPR
PTNKFQGLVFDLVTKQFFDILIMVLICLNMVTMMVETDEQSPEKENILYWVNLVFIVIFS
TECCLKMIALRKHYFNVGWNIFDFVVVILSIVGLLLADIIEKYFVSPTLFRVIRLARIGR
ILRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFAYVKKESMIDDIF
NFETFGNSMICLFMITTSAGWDGLLNPIMNTPPDCDPDFENPGTSVRGNCGSPAVGIVFF
TSYIIMSFLVVVNMYIAIILENFNVATEESADPLSEDDFDMFYETWEKFDPRASQFIHYS
ELSDLCDVLQDPMRIPKPNTIKLIQMDLPLVPGDKIHCMDILLALTAEVLGESEAMDGLK
ATIEDKFMANNPTKKLYEPISSTLRKKHEELAAAVIQRTYRRHLLQRVIKLASYKYKERT
GGQRDDLSPPETEGFLCKRMDQLYGDSETALAAPAEDQTVQVEPQRDILLHAAPPRSDCN
FLHDESLTETMMQLQTNSNQECFLSKK
NT seq 5304 nt   +upstreamnt  +downstreamnt
atggcccctctgctgccccctgttggtgcggaggtgttcagacgcttcacaccagcctca
ctggaggaaatccagcggaggcatgaagctgaagagaagcagcagcaaatcagaaaggag
cagaacattgagatagcagaggaggatcttcctaaaccagcaagtgacctggaagctggg
aagcccctcccctttatttatggagacccgcccgctgagtttctcaacatcccattggag
gagctggatcccttctaccaatcacaaaagaccttcatcgttctcagtaagggaaatgtc
atctacaggttcaacgcagaaccagcctgttacgtgttgagtcccttcagcccactgagg
atcttctccatcaggatcctcatccattctttattcagcttgttcatcatggtgacaatc
ctgaccaactgtgtgttcatgaccatgagtgaccctccaccctggagcaagacagtagaa
tacgtattcacaggcatctacacgtttgaggcaaccatcaaagttttatccagagggttc
tgcatgggagacttcaccttcctgagagatccgtggaactggctggacttcatggtcatc
agcatggcatacctgacagagttcgttgacttgggaaatgtatcggcactgaggacgttc
agagttctccgagccctgaaaaccatcacagtgatccctggtttaaagacgattgttgga
gctctcatccagtcggtgaagaagctgcgtgacgccatgattctgactgtcttttgcctc
agtgtctttgctctgattggtcttcagctgttcatgggaaacctcagacaaaaatgcgtc
ctgatcccaccgctgttactcaacgacacgtcagagggagctttcaacatcagttcccac
gaaaacaacagcagtgacttcgatttttacgagtacattaacaacccagacaattattac
cacctacctgatcaacttgatgccctgctgtgtggaaacagctctgatgcagggacctgt
ccagatggatacatgtgtctgaaggcagggagaaacccaaactatgggtataccagctac
gacagtttcagctgggcgtttctgtctctgttcagactcatgactcaggacttctgggaa
aatctcttccacctgacgctgcgggcggcaggtaaaacctacatgatcttcttcgtggtc
atcatcttccttgggtccttctacctcattaacctcatcctggcggtggtggccatggcg
tacgctgagcagaatgaggccaacatcgccgaggccaaacagaaagaagaggagtatgcc
cagattctggaggcactgaagcagagggaagaggagcaagcggccaagagggcggcgctc
ttggagaatcaagaccccacatcacaagaggagcatgcgaacatggaagagtttgaggac
gaccagaggccatgtcctccatgctggtacgtgtttgctgacatcttcctgaagtgggac
tgttgcggctgttggcgatggctgaaaaagctcctgtatactatcgtcatggatccgttt
gtggacctcgccatcaccatctgcattgtcctcaatactgtcttcatggccatggagcat
tatccaatgactgtggagtttgaaaatcttctcagcactggaaatttggtctttacaggg
atctttacagctgaaatgattctcaaacttttagcgatggatccatattattacttccag
gtgggctggaacatctttgatagcatcatcgtcaccatgagtctggtggagcttggactg
gcgaatgttcagggtctgtccgtgttgcggtccttcagattgatgagagtgtttaagctg
gccaagtcatggccaactctcaacatgttgataaagatcatcggcaactcggtgggagct
ctggggaacttgacgctggttctcgccatcattgtcttcatcttcgccgtcgttgggatg
cagttgtttggaaagagctacaaagactgcgtctgccgcattgcagaagactgtgagctt
cctcgctggcacatgaacgacttctttcatgccttcctcatcatcttcagggttctgtgt
ggcgagtggattgagacaatgtgggactgtatgcaagttgctggggaacctatgtgtctg
attgtctttatgatggtactggtgatcggaaacctggtggttctgaatctgttcctggcc
ttgctgctaagctcattcagtggggataatcttgccgtcacagaagatgaaggagaaaat
aatctccagattgcaataaaccggatcagcagggctgtcgcctggaccaaggcctggttc
ctgaaacatctcttgactttagcgggaaagaaaacaaacgtgaactcagacgcgaatgct
gtaccctgcgaagaaggcgaaaaatcaaaggaagttttatctctgacaatcgtgaattca
gagcatcccatggttcaagttcccaaagttgatctgtcattcctgagcagctactaccag
aacatcacatctttgaaggtccccattgctgaagctgagtctgactttgacatgcctgaa
aatgaagacgaggaagatgaagatgaagatgaagatgaggatgatgatgaggatgacata
gaagaacagctttcacaaggtgacgagtcttcagtctgcagcactgtgcagagagctccc
gaagtcccaaaagtagaagaggtcgaagaaattccagaggactgctttacagaaaagtgt
tacaatcgctgtccttgtctggacatagacacgtcccacagcaaaggaaagatctggttt
aatttcaggaaaacttgcttcaacatcgtagagcacaactactttgagtccttcatcatc
ttcatgatcctgctgagcagtggagctctggcctttgaggacatctacattgagcagcgc
cgtgtaatcaagataattctggaatatgcagatcaggttttcacctacgtgtttgtggtg
gagatgattctcaagtgggtcgcttatggattcaagacctacttcaccaacgcctggtgc
tggctggacttcctcattgtagatgtgtctctggtgtcactgacagcaaacatcctggga
tactctgagctgggagctataaagtctctgaggactctgagagcattaaggcccctaaga
gccctgtcccgctttgagggcatgagggtggtggttaatgccttggttggtgccatcccc
tccatcttcaacgtgctgctggtctgtctgatcttctggctcatctttagcatcatgggt
gtgaacctgtttgcagggaagttttattactgcttcaacgaaacatcagaggagcgtttc
cttcctgaggatgtcaacaataaaacccagtgtctcgatttgattgagggctcctccgag
gttcgctggaagaacacaaagatcaactttgacaacgttgggatgggctacctgtctctg
ctgcaagtggccacatttaaaggctggatggacatcatgtatgcagcggtggactccaga
gaggtggagtcccagccaatgtatgaagacaacctgtacatgtacatgtactttgtctgc
ttcattatctttggctccttcttcaccctcaacctcttcatcggagtcatcatcgacaat
tttaaccagcagaaagcaaagcttggaggaacagatatattcatgacagaagaacagaag
aaatactacaacgccatgaagaaattgggatccaagaagcctcagaagcctgttccccgg
cctacaaacaagttccagggtctagtcttcgaccttgtgaccaagcagttttttgacatc
ctcatcatggtgttgatctgcctcaatatggtgacaatgatggtggaaacagacgagcag
agtcctgaaaaggaaaacatcctgtactgggtcaaccttgtctttattgtcatcttcagc
acagagtgctgtctcaaaatgatcgctctacggaagcactactttaacgtcggatggaac
atatttgactttgtagtggttatattgtccattgttggccttcttcttgctgatatcatc
gagaagtactttgtttctccaactctcttccgagtgatccgactggctcgtattggacgg
attcttcgtctcattcgtggagcgaagggaattcgaacactgttgtttgccttaatgatg
tctcttcctgccctcttcaacattggcctccttctcttcctcatcatgtttatcttctcc
atctttgggatgtctaattttgcttacgtgaagaaggagagcatgattgatgacatcttt
aactttgagacctttgggaacagtatgatctgcctgtttatgatcactacgtcagctgga
tgggacggtctgctcaatcccatcatgaacacacctccagactgtgatccagactttgaa
aacccaggcacgtctgtcaggggcaactgcggcagcccggcagtgggcatcgtcttcttt
acttcatatatcatcatgtcttttctggtggtggtcaacatgtacatcgccatcatcctg
gagaacttcaatgtcgccacagaggagagcgccgacccactttctgaggatgacttcgat
atgttctatgaaacctgggagaagtttgaccctcgagcttcacagttcatacactacagt
gagctgtcagacctgtgtgatgttctgcaggatcctatgaggattcccaaacccaacacc
atcaaactgatacaaatggacttgcctttggttcccggagacaagatccactgtatggac
atcctgctagctctcactgcagaggttttgggcgaatctgaggcaatggatggtctaaag
gcaacgatagaggataagttcatggccaacaatcccacaaagaagttgtatgaaccaatc
agcagcactttgcgtaagaaacacgaggagctggcagcagcagtgatccagagaacctac
aggagacatcttctgcagcgagtgatcaaactggcgtcctacaagtacaaagagaggaca
gggggacagcgagacgatctgtctccaccagagacagaaggatttctctgtaaacgaatg
gatcagctttatggagacagtgagacggctctggctgctccagctgaggaccagactgtc
caggtggaaccacagagggacattctcctccacgctgctcctccgcgcagcgactgcaac
ttcctacacgatgagagcctgacagagacgatgatgcagctgcagacaaactcgaatcag
gagtgtttcctgtcaaagaagtag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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