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KEGG   Protobothrops mucrosquamatus (Taiwan habu): 107286068
Entry
107286068         CDS       T05763                                 
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-6(VI) chain
  KO
K06238  collagen type VI alpha
Organism
pmur  Protobothrops mucrosquamatus (Taiwan habu)
Pathway
pmur04510  Focal adhesion
pmur04512  ECM-receptor interaction
pmur04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:pmur00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    107286068
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    107286068
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pmur04147]
    107286068
   00536 Glycosaminoglycan binding proteins [BR:pmur00536]
    107286068
Exosome [BR:pmur04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   107286068
Glycosaminoglycan binding proteins [BR:pmur00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   107286068
 Hyaluronan
  Extracellular matrix or blood plasma proteins
   107286068
SSDB
Motif
Pfam: VWA VWA_2 Collagen RVT_1 VWA_3 Zap1_zf2
Other DBs
NCBI-GeneID: 107286068
NCBI-ProteinID: XP_029139653
Position
Unknown
AA seq 2427 aa
MQGCAIDILPGAKLPKPRMYTMTPKEMEELRQYIDKNLARGFIQPARSRIAAVVLFKEKK
DGSLRLCVDFHGINRVCIENMYPLPLMKDLLAHLAKGKVFTKLDFREAYYRVRIKRGDKW
KMAFNCPLGSYQFRVMLFSLQGGPAVFMQLINELLHEHLYHGVLMYLDDILIYTSNMTEH
VQLIYSLINYHNLKMLLTLLLVILGIQTSKTQHPASESVDVVLLIDSSNTLGRQGFVLLK
NSVNKMINNLPIGPNKYRLALAQYSDDVHVEFQLDEFRGKSPILNHVKKIFSFQGGPLRT
GNAIQKIHKTLFKAPRRDRHQVLIVTTSGVSEDDVEGPATLMREDGIKIIALGMLNASKQ
ELQSMATHPFSYHSNTLKDLQKFSSNILSVIESAIATNESLVITTTTPSTTYAYSIPIKV
ADCSYDLIADVVFVVDEAVSPENSEHIISFLQNVTASLDVQKSCIRIGLVTYSNEPRVLS
QLNTETEIKDLILKITSFSPREGNANLGAALNFTREIIFTESAGSRRTEGVEQIATIITH
RPAEDSVTEASNLLLQKDVTVFAISVEGANITQLGGVVSYPPKRNIIKVDHFSNLADESK
IFERKLFQHIHTFFAQGESIERFRSGCMETEKADIYFLVDGSSSISPFNFVNMKTFLKEV
IKLFTIGPDHVRFGVVQFGTSYQTEFELDKYMKISPLEKAINNIIQMGIDTYTGAAIRSM
QPLFEKAKEQRGGKIPYYLIVLTDGEAHDNVLEPSKMLRKSGVNIYAIGVKPANITQLNE
IADSGSKVYYVEQFDSLKNIKNEIVQDICSEKACEEMKADVMFLVDSSGSISDQDFEKMK
KFMKELVDKCSVGLHEVQVGVVQFSSINQEELPLSSSKDHIINSIGNMEQMKQNTYTGKA
LQFVSDYFKPSKGARSSVNKILILLTDGEAQDNVREPASALRKEGVIIYSIGITGANVTQ
LVEISGTQTKMFYLQDYDRLKFIEKDIIFGICTPYKPMECKRINRLDLVFVIDSSTSIGG
TNYALVQNFIIGIVNKSYVGINHVQFGAMKYSDNPEIMFKLNTYSKKSDIIQFIQNDVLL
EGNTYTAKALQLSKGLLTKENGSRLHQGVPQVLMVITDGESHDRAKLDSISNELRKKGTI
IYAIGIKDAKPEELEIMAGSKSNWFYMSSFEGLQNISTDLCPRSXCDIEAELVFLTDSRS
IPDKELKSVKDFVINLLKSIINKDNILVGMAQFSNTLQEVFQLGAYQNLPELYSKITNMS
LITGGSTLIGHALKEVKTFFKTSKQRVARSINQKLFIFTDGRSDDEFPQAAKDLRDEGVE
IHAIAVGNVTDANLLQITNSPNRKYKVDHYSDLKSLVNHINKEICKETTEATCFVDVIIG
FDMSSQKPGDNLFSKQQHLEIHLPDIIKGLTSLSSTNCSKDKKAQFSVTISVENTEKSFQ
KKIHHVDDTNIVKELKNIVLNRPSQLNIDFLDSIWNSVKNVTDIKNRNTVLLLFSDGLDD
NIITLGQKSEELRIQGLDGLITVALEGTKNIDQLQHIEFGKGFGYNTQLSIDTENVATRI
IQYMDQIAERKCCCILCRCEGEEGPRGERREKGPKGTTGFAGHPGYPGDDGEQGPMGIPG
IQGKKGDIGQCSSRGRKGQRGLHGETGEDGADGVDAIHGEEGSLGFPGLKGEKGEPGKMG
NTGPKGPPGDLGSKGFQGDHGESGQDDNIRGAKGFKGLSGRMGERGLRGSDGSAGSPGNK
GAEGSTGPPGPKGEEGNPGSNGLQGDQGVQGSQGTTGVLGVKGEKGQSGNYGRLGDIGDE
GPKGNQGKPGSRGNKGESGEPGKKGEKGSLGQQGMRGEEGTVGFGNIGRKGRKGIDGFPG
DFGEQGKTGDMGNPGKRGLKGKSGRMGTPGLIGDGGKLGTWGYPGHLGPKGAKGQPFYSP
CELIEYVQKHSPCWTGELKCPAHPTELVFAFDISQDTNSEIFEEMRKTVIDIVNQTNIRE
SNCPVGARVAVVSYSSKTNYLIRFTDFQSKNKLLQELNRLSFQRTTNRRDIGGSMRFVAR
HLFKRTLQGANVRKVAVFFSNGESDHPNSIGTAVLEFTALGIQPAVISFKNIPEITQAFE
LDSTGLFQVIHLHQKSDYLSVLERLQVCVICYDKCRPDESCFRTPPFEPEAYMDAAFILE
NSRKISTTGFEELKHFLSRSLDSFDISANPNTSLIGDRIAVVSHAPPNFQFQRQELPVKI
EFDLVTYESKRQMKRHIEKFVQKLNGEVALGHALEWTINNIFSEGPNQREKKAIFVISAG
ETSHWDKEVLRDAALRTKCKGYAVFVLSIGPEYDYIELMELASLPLEHHMVQLGRIHKAE
LEYAVKFLKPLIHLLKSKIHSYPHPEFERICATISRQKPSTPFDKTPPNKIHLIDENGSA
FPEYPQSDSLFPEKIANNAHPSIMFGN
NT seq 7284 nt   +upstreamnt  +downstreamnt
atgcagggctgtgcaattgacattttgccaggggctaaactgccaaagccccggatgtac
acaatgacacccaaggagatggaggagctgcgtcaatacattgacaagaacttggcaagg
ggattcatccagccggcacgatcacggattgcagctgtggtgctctttaaggagaaaaag
gatggatccctgcgcctgtgtgtagacttccacggcatcaacagggtttgcattgagaac
atgtaccccctaccgctaatgaaagacctattggcccatttggcaaaggggaaggtgttc
acaaaacttgacttcagagaagcatattacagagtccgaatcaaacgaggagacaagtgg
aagatggcgttcaactgcccacttggaagctaccagttccgggtgatgctgttcagcttg
caggggggccctgcagtgttcatgcagctcatcaatgagttattacatgaacacctttac
catggggtgctcatgtatttggatgatatcttgatctatacctccaacatgacagaacat
gtccaattgatttattcattgatcaactatcacaatctgaaaatgcttctgactttgctc
cttgttattcttgggatccagacttctaaaacacagcatcctgcctctgaatctgtagat
gttgtccttctgattgacagctctaatactctcggcagacaaggttttgtcttattaaaa
aattctgtgaataaaatgatcaacaatcttccaatagggccaaataaatatcgccttgca
cttgcccaatacagcgatgatgtccatgttgaattccagctggatgagttcagaggaaaa
agccctatcctgaaccatgttaaaaagatattttcattccagggtgggcctttaaggact
ggaaatgccatacaaaagatccacaagactcttttcaaggcaccaagaagagacagacac
caagttttgattgttacaacttcaggggtatcagaagatgatgtggaaggacctgccaca
ttaatgagggaggatgggataaaaataattgctttaggaatgctaaatgcatctaagcaa
gagctgcagtcaatggccacacatccattcagttaccattctaatacactaaaagatctc
caaaagttttcctcaaatatattgtctgtcattgaatcagctatagcaacaaatgagagc
ttagtaatcaccacaactaccccaagtacaacttatgcttacagcatacccataaaagtt
gcggattgttcttatgatttaattgccgatgttgtatttgtggtggatgaagctgtttca
cctgaaaatagtgaacatattatatctttcttacaaaacgtaacagcctctcttgacgtg
cagaaaagctgcatcagaattggtcttgtgacatacagcaacgagcctcgtgtactttct
caactgaacacagaaacagagataaaggatcttatattgaaaatcacgagcttttctccc
agggaaggaaatgctaatttaggtgctgccttaaactttaccagggaaataatttttact
gaaagtgctggaagcagaaggacagaaggtgtggaacaaatagctaccatcatcacccac
agacccgctgaggatagtgtaacagaagcatcaaatctccttttgcagaaagatgtaacg
gtatttgccataagcgttgaaggggctaatatcacacagttagggggagtagtatcctat
cccccaaagaggaatattataaaagttgaccatttttcaaacctggcagatgagtcaaaa
atctttgagaggaaactgttccagcacattcatacgttttttgcccaaggtgaaagtata
gaacggttccgatcaggatgcatggaaacagaaaaagctgatatttactttcttgttgat
ggttcatcaagcatcagtcccttcaattttgttaacatgaagacattcctaaaggaagtg
attaagctatttactataggacctgatcatgttcgatttggagttgttcagtttggaacg
tcttaccaaacagaatttgaacttgataagtatatgaaaatcagccctttagaaaaagcc
attaataatataatccaaatgggaatagacacgtacactggagctgctatacgatctatg
cagccgttatttgaaaaagcaaaagaacagcgaggtggcaaaatcccttattatctcatt
gtactgacagatggagaagcacatgataacgtgctggaaccttctaaaatgctaagaaaa
tcaggtgtcaatatttatgctattggtgtgaaacctgctaatatcacacagttaaatgag
attgcagactcaggatcaaaggtttactatgtggaacagtttgactccttgaaaaatata
aaaaatgaaattgttcaagacatatgctctgaaaaagcctgtgaggaaatgaaagctgat
gtcatgttcttagtggacagctctggaagtataagcgatcaggattttgagaaaatgaag
aagttcatgaaagaattagtagataagtgtagtgttggtttacatgaagtgcaagttggc
gttgttcaattcagtagcatcaatcaagaagagttaccactcagctcatcaaaagaccac
attattaactctattgggaacatggagcaaatgaaacagaacacttatacaggaaaagct
ctgcaatttgtttctgattatttcaaaccttccaaaggagcacggtcttctgtcaacaaa
attcttatcctcctcacagatggggaagcacaagataatgtaagagaaccagccagtgct
ctaagaaaagaaggtgtcattatttattccattgggattactggtgccaatgttacacaa
ctagtagagatcagtggaacacaaaccaagatgttttacttgcaagattatgatcgtctg
aaattcatagagaaagacatcatatttggcatatgcactccgtataagccaatggaatgc
aaaaggataaaccgtttagatctggtttttgtaattgatagttctaccagtattggtgga
actaactacgctcttgtgcaaaacttcataattggcattgtgaataaatcttatgtaggt
ataaatcatgttcagtttggagcaatgaagtattctgataatccagaaattatgttcaag
ctaaatacatatagtaaaaaatcagatatcattcaatttattcagaatgatgtactttta
gaaggaaatacatacacggcaaaagctcttcagctctcaaaaggtcttttaactaaagag
aatggcagccgcctacaccaaggtgtccctcaagttcttatggtcataacagatggagaa
tctcatgatagggcaaaacttgatagcatttcaaatgaactcagaaagaaaggaactatt
atttatgccattggaataaaagatgcaaaacctgaggaacttgaaatcatggctggatca
aaaagtaactggttctacatgtcatcatttgagggactgcaaaacatatccacggaccta
tgtcccagatcctaatgtgacattgaagcagaacttgttttcctaactgattcccgaagt
atcccggacaaagaactgaagagtgtaaaggattttgtgataaacttgcttaagtcaatt
attaataaagacaatattctagttggcatggcccaattcagtaatacccttcaagaagta
ttccagcttggcgcttatcaaaacctaccagaactatatagtaaaatcactaatatgtca
ctgatcacagggggttccacattgattggacatgccctcaaagaagtcaaaacctttttc
aaaaccagcaaacaaagagtagctcgaagtattaaccaaaaattgttcatattcactgat
ggaagatcagatgatgagtttcctcaagcagcaaaagatctgagagatgaaggtgtggaa
atccatgcaattgcagtaggaaatgtgactgatgcaaaccttctgcagattaccaactct
ccaaatagaaaatataaggttgaccattacagtgatctaaaaagtcttgtaaatcacata
aataaggaaatttgtaaagagactactgaagcaacatgttttgtagatgttattattgga
tttgatatgtcatctcagaaaccaggggacaatttattcagtaagcaacaacatttggag
attcatcttcctgatattataaaaggcctaacgtctttaagcagtacaaattgctctaag
gataaaaaagcacaattcagtgtgactatttcagtagaaaacacagaaaaatccttccag
aaaaaaattcatcatgttgatgacacaaatatagtaaaagaactcaaaaacattgtgctc
aacagaccatctcagctcaacatcgacttcttggacagtatttggaattcagttaaaaat
gtgactgacataaaaaatcgaaacacggtattacttcttttctcagatggcttggatgat
aatataataacacttggacaaaaatctgaagaacttagaatacaaggactagatggactc
ataactgttgccctggaaggaaccaaaaatattgatcaacttcagcatattgagtttgga
aagggatttggatataacactcaattatcaattgacacagaaaatgtggccacaaggatc
attcagtacatggaccaaattgctgagcgaaagtgctgctgcatattgtgtagatgtgag
ggggaagaaggaccccgcggagaaagacgagaaaaggggcccaagggcacaactggtttt
gcgggacatccaggatatcccggagatgatggagagcagggtcccatgggaatccctgga
attcagggaaagaaaggtgatataggtcaatgtagcagtaggggacgaaaaggtcaacga
ggactgcatggagaaacgggagaggatggggctgatggagttgatgcaattcatggggaa
gagggatcacttggatttccaggactaaaaggcgaaaagggagaacccggaaaaatgggc
aatacaggacccaaagggcctcctggtgacttgggatcaaaaggcttccaaggagatcat
ggtgaatctggacaagacgataacataagaggagcaaaaggcttcaaaggactgtcagga
aggatgggagaaagaggattgagaggttcagatggctcagcaggatccccaggaaataag
ggagctgagggaagcacaggacctccaggcccaaagggagaggaaggaaaccctggttca
aatggtttgcaaggagatcaaggagttcaaggttcccagggaacaactggtgttcttggt
gtgaaaggagaaaaaggacaatcgggaaactatggccgtctaggagacattggagatgaa
ggacctaaagggaatcaagggaaacctggatccagaggaaataagggagaatctggggaa
cctggaaagaaaggagaaaaaggttcccttggccagcaaggaatgaggggagaagaagga
actgttggttttggcaatataggaaggaaaggaagaaagggtatagatggattccctggt
gacttcggagagcagggaaaaactggagatatgggcaatcctggaaaacgtggactaaaa
gggaaaagtggaagaatgggtactccaggattaattggtgatggtggcaaactaggaaca
tggggttatcctggacatctgggtccaaaaggagcaaagggccagcccttctattcaccc
tgtgaacttattgaatatgtacagaaacacagcccctgctggacaggtgagttaaaatgt
ccagcacatcctacagaactagtatttgccttcgatatatctcaagataccaattctgag
atatttgaagaaatgagaaagactgtcattgatattgtgaaccaaacgaacatcagagag
agcaattgtcctgtgggagccagagtggctgttgtgtcctacagctccaaaaccaactac
ctgatccgctttacagatttccaaagcaagaacaagttgttgcaggagctcaatagactt
tctttccagagaacaaccaacagacgggacattggtggatccatgaggtttgttgccagg
catctcttcaagcgaactctccaaggtgctaatgtgaggaaagttgcagtcttcttcagc
aatggagagtccgaccatcccaactcaattggcacagcagtcctagaattcactgccctg
ggcatccagccagcagtcatttcttttaaaaacatccctgaaattacccaagcttttgag
ctggacagcacaggattgtttcaagttatccatctccatcagaagagtgattatctttca
gtcttagaacgacttcaagtgtgcgtaatttgctatgacaaatgcagaccagatgaatct
tgcttcagaactccacctttcgaacctgaggcttatatggatgctgcattcattctggaa
aattctaggaaaataagcactactggatttgaagaactaaaacatttcctaagtagatca
ttggacagctttgacatttctgcaaatccaaacacctctttgataggtgatcggatagct
gttgtgagtcatgctccaccgaatttccaattccaaagacaagagcttccagtaaaaatt
gagtttgacttggtgacatatgaaagtaaaagacaaatgaagaggcatattgaaaagttt
gttcagaaactaaatggagaagtagcacttggtcatgccttggagtggacaatcaataat
atcttttcagaaggacccaaccagagagagaaaaaggctatttttgtcatatctgcagga
gaaacaagtcattgggataaggaagtactgagagatgcagccctaagaaccaaatgcaaa
ggctatgctgtatttgtgctttcgatagggcctgagtatgattacatagaacttatggaa
ctggcaagccttcccttggaacatcacatggtacaacttggcagaatccacaaagctgaa
cttgagtatgcagtcaaatttctgaagccattaatacatctgctcaagagtaaaatacac
agctatccacatccagagtttgagagaatatgtgcaacaatcagtcgtcaaaaaccaagc
actccatttgacaagactccaccaaataaaattcatttaattgatgagaatggctctgct
tttccagaatacccgcaaagtgattctttatttcctgaaaagatagccaataatgctcat
ccgtctattatgtttggaaattaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (6)   
   Pfam (6)   
All databases (14)   

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