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KEGG   Petromyzon marinus (sea lamprey): 116958263
Entry
116958263         CDS       T09614                                 
Name
(RefSeq) retinoic acid receptor RXR-alpha-B-like isoform X1
  KO
K08524  retinoid X receptor alpha
Organism
pmrn  Petromyzon marinus (sea lamprey)
Pathway
pmrn03320  PPAR signaling pathway
pmrn04148  Efferocytosis
pmrn04920  Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:pmrn00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    116958263
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pmrn03000]
    116958263
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:pmrn03310]
    116958263
Transcription factors [BR:pmrn03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    116958263
Nuclear receptors [BR:pmrn03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   116958263
SSDB
Motif
Pfam: Hormone_recep zf-C4 Nuc_recep-AF1 Rib_recp_KP_reg
Other DBs
NCBI-GeneID: 116958263
NCBI-ProteinID: XP_032836685
UniProt: A0AAJ7UK40
Position
74
AA seq 486 aa
METKPYFRFESSNQVGAPMSAQSPHSTMSSPPPLAHGGAGMGGSRVMGGLGGGGSGAGGG
GPLNGLGSPYPVISSSGLGSPIITTQGLGYGSGIGNPQAGGGVGSSSGLNMVSSSEDVKP
PLGINGVGGKASMHGGSSPLPCLSKHICAICGDRSSGKHYGVHSCEGCKGFFKRTVRKDL
SYTCRDTRDCIIDKRQRNRCQYCRYQKCLATGMKREGVTAGEAAVQEERQRGKDKEDSGD
GEGGAGGGANEDMPVEKILDAELAVEPKTETYAELGAASPAGASPNDPVTNICQAADKQL
FTLVEWAKRVPHFSELSLDDQVILLRAGWNELLIASFSHRSISVKDGILLATGLHVHRSS
AHSAGVGSIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDAKGLSSPAEVEALREKV
YASLESYCKQKYPDQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLE
APHQLT
NT seq 1461 nt   +upstreamnt  +downstreamnt
atggagactaagccatattttcgttttgagtcctccaatcaagtgggtgcacccatgagc
gcccagtcccctcactccactatgagctccccgccgcccctggctcacggaggggcaggg
atggggggctcgagggtgatggggggcctgggcggagggggcagcggggccggaggagga
ggacccctgaacggcctggggtccccgtaccccgtcatcagctcctcggggctgggatcg
cccatcatcactacgcagggcctcggctacggcagcggcatcgggaacccacaggcgggc
ggtggcgtgggcagctccagcgggctcaacatggtgagcagctcggaggacgtgaagcct
ccgctgggcatcaacggcgtgggcggcaaggcgtcgatgcacggtggcagcagccccctg
ccctgcctctccaagcacatctgtgccatctgtggggaccgctcttctggcaagcactac
ggtgtgcacagctgcgagggctgcaagggcttcttcaagcgcacggtgcgcaaggacctg
agctacacttgccgcgacacgcgcgactgcatcatcgacaagcggcagcgcaaccgctgc
cagtactgccgctaccagaagtgcctcgccaccggcatgaagcgtgaaggcgtgacggcc
ggcgaggcagccgtgcaggaggagcgccagcgcggcaaggacaaggaggacagcggggac
ggggagggcggcgccggcgggggtgccaacgaggacatgcccgtcgagaagatcctggac
gcggagctcgcagtggagcccaagacggagacctacgccgagctgggcgccgcctcgccc
gccggcgcctcgcccaacgacccggtaacgaacatctgccaggcagcggacaagcagctg
ttcacgctcgtggagtgggccaaacgcgtcccccacttctcggagttatccctcgacgat
caggtcatccttctacgtgcgggctggaacgagctgctcatcgcgtccttctctcaccgc
tccatctcggtgaaggacgggatcttgctggcgacgggcctgcacgttcaccgcagcagc
gcccacagtgccggcgtgggctccatcttcgaccgcgtgctcacggagctcgtgtctaag
atgcgggacatgcagatggacaagacggagctcggctgcttgcgcgcaatcgtgctcttc
aacccagacgccaaggggctgtcgagcccggcggaggtggaggcgctgcgggagaaggtg
tacgcctcgctggagtcgtactgcaagcagaaataccccgatcagcccggcaggttcgcg
aagctgctgctgcggctgcccgccctgcgctccatcggcctcaagtgcctggagcacctc
ttcttcttcaagctcatcggagacacgcccatagacaccttcctcatggagatgctcgag
gctcctcaccagctcacctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (19)   

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