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KEGG   Passer montanus (Eurasian tree sparrow): 120512444
Entry
120512444         CDS       T07277                                 
Symbol
RXRA
Name
(RefSeq) retinoic acid receptor RXR-alpha isoform X1
  KO
K08524  retinoid X receptor alpha
Organism
pmoa  Passer montanus (Eurasian tree sparrow)
Pathway
pmoa03320  PPAR signaling pathway
pmoa04148  Efferocytosis
pmoa04920  Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:pmoa00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    120512444 (RXRA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pmoa03000]
    120512444 (RXRA)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:pmoa03310]
    120512444 (RXRA)
Transcription factors [BR:pmoa03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    120512444 (RXRA)
Nuclear receptors [BR:pmoa03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   120512444 (RXRA)
SSDB
Motif
Pfam: Hormone_recep Nuc_recep-AF1 zf-C4 tRNA_bind_3
Other DBs
NCBI-GeneID: 120512444
NCBI-ProteinID: XP_039586701
Position
Unknown
AA seq 467 aa
MDTKHFLPLDFSNQVNSTSLNSPTSRGPMATPSLHPSIGPGIGSSLGSPGQLHSPISTLS
SPINGMGPPFSVISSPMGPHSMSVPSTPSLGFGTSSPQLNSPMNSVTSTEDIKPPLGLNG
VLKVPAHPSGTMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNK
DCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRGKDRNENEVESTSSANEDMPVEKI
LEAELAVEPKTETYIEANMGLTPSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLD
DQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVS
KMRDMLMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEAYCKHKYPDQPGRF
AKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQMT
NT seq 1404 nt   +upstreamnt  +downstreamnt
atggacaccaaacacttcctgccgctggatttctccaaccaggtgaattccacgtccctg
aactcccccaccagccgggggcccatggccaccccgtccctgcacccgtccatcgggccg
ggcatcggctcctcgctgggctccccgggccagctgcactcgcccatcagcaccctcagc
tcgcccatcaacggcatgggcccccccttctccgtcatcagctcccccatgggcccacac
tcgatgtctgtcccctccacgcccagcctggggttcggcaccagcagcccgcagctcaac
tcgcccatgaactccgtcaccagcacagaagacatcaagccacccctggggctcaatgga
gtcctcaaagtgccagcacatccctcaggaacgatggcctccttcaccaagcacatatgt
gccatctgtggggacagatcttcgggtaaacattacggggtttacagctgtgagggctgc
aaaggcttcttcaagcgcacggtgcggaaggacctgacctacacgtgccgggacaacaag
gactgcctgatcgacaagcgccagcgcaaccgctgccagtactgccgctaccagaagtgt
ctggccatgggcatgaagagagaagccgtgcaggaggagaggcagcggggcaaggaccgc
aacgagaacgaggtggagtccacgagcagcgccaacgaggacatgcccgtggagaagatc
ctggaggccgagctcgccgtggagccaaagacagagacctacatcgaggcaaacatgggc
ctgacccccagctcgcccaatgacccggtgacaaacatctgccaggcagcagacaaacag
ctcttcaccctggtggagtgggccaagaggatcccccatttctctgagctgcccctggat
gaccaggtcatcttgctcagagcagggtggaacgagctgctaattgcctccttctcccac
cgctccatagccgtgaaggacgggatcctgctggccacggggctgcacgtgcaccggaac
agcgcgcacagcgccggcgtcggggccatcttcgacagagtactgacagaactggtgtcc
aaaatgagggacatgctgatggacaagacagagctgggctgcctgcgagccattgtcctc
ttcaaccccgactccaaggggctgtcgaacccggcggaggtggaggcgctgcgggagaag
gtgtacgcgtcgctagaggcttactgcaaacacaaataccccgaccagcccggcaggttt
gccaagctcctgctccgcctcccagccctgcgatccatcggcctgaaatgcctggagcac
ctcttcttcttcaagctaataggcgacacgcccatcgacaccttcctgatggaaatgctg
gaagcgccgcaccaaatgacttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (4)   
   Pfam (4)   
All databases (20)   

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