[go: up one dir, main page]
More Web Proxy on the site http://driver.im/
KEGG   Passer montanus (Eurasian tree sparrow): 120504130
Entry
120504130         CDS       T07277                                 
Symbol
COL6A6
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-6(VI) chain
  KO
K06238  collagen type VI alpha
Organism
pmoa  Passer montanus (Eurasian tree sparrow)
Pathway
pmoa04510  Focal adhesion
pmoa04512  ECM-receptor interaction
pmoa04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:pmoa00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    120504130 (COL6A6)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    120504130 (COL6A6)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pmoa04147]
    120504130 (COL6A6)
   00536 Glycosaminoglycan binding proteins [BR:pmoa00536]
    120504130 (COL6A6)
Exosome [BR:pmoa04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   120504130 (COL6A6)
Glycosaminoglycan binding proteins [BR:pmoa00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   120504130 (COL6A6)
 Hyaluronan
  Extracellular matrix or blood plasma proteins
   120504130 (COL6A6)
SSDB
Motif
Pfam: VWA Collagen VWA_2 Kunitz_BPTI DUF1194
Other DBs
NCBI-GeneID: 120504130
NCBI-ProteinID: XP_039569253
Position
Unknown
AA seq 1285 aa
MHSDQWEDKIXVGVIQHSDVIYTEFFLNTFYNKNYSLKKIQNLHYKEGGTKTGQSLRGLT
RVFSSEYSAETVEDRARALRSNGVYVFEANMGMIKCPLGAFTVENLDALKTIKNIVSQVC
XYKHLPGQECNIDLSIAIDISRSVQPTATMLLKQRLQAFLPTLLLQMKSLPNTSCNAPVE
IGFKFQVLAENKQLIFDSGFEEYNEEIIQKFLGAQTTVDTYMNADFLQALEENFFNVTSA
KVKVLLIFSDGLDDSLDNLKKAAESLRFKGLDALLLVGLDNTQNLTEFWEIEFGRGFGYN
EPLNVGFADVANILQRNLDTVAERKCCKVICKCLGENGDHGVRGNPGRKGSTGYRGSPGH
PGEEGGIGERGPAGFSGTQGDRGCAGVRGHKGARGYRGSQGDHGERGFDGTDGEQGDRGF
PGPSGEKGSRGKWGRKGPRGEPGERGESGLRGDHGDPGATNNVTGPKGEKGNLASQGDPG
PQGLQGEQGDAGLDGAAGRRGPPGIKGEQGDLGETGYSGEIGLPGPQGPRGPQGIRGPPG
PQGMPGPLGSLGMPGSPGSVGKFGVRGAKGEPGDPGEKGLAGHPGHRGIPGMDGRDVYGP
EGSKGAKGESGFIGYPGPEGEEGDRGIPGAEGPKGIRGRRGNSGTPGSRGDPGDQGPLGS
MGAKGPVGTALMEPCELVNFTRKNCPCSSDTCPAYPTEVVFALDMSDDVTPAAFERMRNI
VILLLKTIKISESNCPTGARVSVVSFNINIHYLIRFSEFQKNNLLLQAVQRIPLERSSGK
RNIGAAMRFVARNVFKRVRQGILTRKVALFFANGPSQDDVAISTAVLELSALDITPVVIA
FSEVPNVRRAFSIDDTRKFQLFVWERQQDESLEDITYCTLCFDKCNPRTNCEVPFSPLVQ
MDMDITYVMDSSRSVSSEQFQRAKDFVSNMVDQFVVSSQPNESYGGIRVALVQQAPRGFL
PDRNQTPVALEFDLVTYSNKDLMKKHIQESVHQLEGPSAIASALQWTVENVFFKAPRQRK
HRVIFTIDGSKTSTWDRERLREISLGAKCQGFTLFTLALGSDVSDNQLMELSSSPTDQHS
LTLGRFSTPEMEYAQRFSRAFLNLLQQEMNSYPSPELQEECENLDRGDIQQEASMTERIP
FPGMAESGSSQVLEDMEKNESRVMKSVKENAKEPVYTVPEMRDDYEENEYFIEENARREK
PQECGKAQEKNKKNLETTAETRGGCNDYDACDLVQDSGECQNYILKWYYDKEQKMCGQFW
YGGCGGNKNRFETQEECGFLCIESS
NT seq 3858 nt   +upstreamnt  +downstreamnt
atgcacagtgatcaatgggaggacaaaattngtgttggtgtgattcagcacagtgatgtg
atatacactgaattctttttgaacactttttataacaaaaattattccttaaaaaagata
caaaatctacattacaaagaaggaggtaccaaaacagggcagagcctccgcggcttgacc
agagtcttttccagtgagtactctgctgagactgtagaggatagagcaagggctttaagg
agcaatggggtctatgtctttgaagctaacatggggatgataaaatgccccttgggagct
ttcacagtagaaaatcttgatgcactgaaaaccatcaaaaatattgtcagtcaggtctgt
taatacaaacatctccctggtcaggaatgcaatatagatctttctatagcaattgatatt
tcaaggagtgtgcagccaacagccacaatgctcctgaaacagagactgcaagcattcctc
cccacacttctactccagatgaaatcactgccaaataccagctgcaatgctccagttgaa
attgggttcaagttccaagtattggcagagaacaaacaattaatctttgactctggtttt
gaagagtataatgaagagatcatccagaagttcttaggtgcacagaccactgtggacacc
tacatgaatgcagactttttgcaggcacttgaggagaacttctttaatgtgacctctgct
aaagttaaggttctgttaatattttcagatgggctggatgattcactggataacctgaag
aaagcagcagagtcacttcgctttaaaggtcttgatgcacttctgttagttggcctggac
aatacacagaacttgactgaattttgggaaatagagtttggcagagggtttggatacaat
gaacctctgaatgttgggtttgcagatgttgccaatattttgcagagaaatcttgatact
gttgcagagagaaaatgctgtaaggttatttgtaagtgtcttggagaaaatggtgatcat
ggtgtcagaggaaatcctggaaggaagggaagtacaggttacagaggatctcctggccat
cctggtgaggaaggtgggattggggagagaggcccagccggtttcagtgggactcaagga
gacaggggatgtgcaggtgtcagaggccataagggggccagaggctatagaggaagtcag
ggtgatcatggtgagcgtggatttgatggcactgatggagagcagggagatcgtggattt
cctggaccttctggagagaaaggcagcagaggaaaatggggcagaaaaggccccagagga
gaaccaggtgaacgaggagaatctggtctaagaggagatcatggagatcctggggctacc
aataatgttactggccctaagggtgaaaaaggaaacctggcatcacagggagaccctggc
ccacaaggactccaaggagagcagggtgatgctggcctagatggtgcagcaggtcgaaga
ggccctccaggtataaagggtgagcaaggagatctgggagaaacaggttactcaggagaa
attggtcttccaggcccacagggcccaagaggaccacaagggatcagaggacctcctgga
ccacaaggcatgccaggccctctgggtagtctggggatgcccggttcacctggctctgtt
ggaaagtttggtgtaagaggagcaaagggtgaacctggtgaccctggagagaagggcttg
gctggccaccctggacacagaggcattccaggcatggatggcagagatgtgtatggtcct
gagggaagcaaaggagcaaagggagaatctggattcataggatatcctggtccagaggga
gaagaaggagatcgaggcattccaggagctgaaggacccaaaggaattaggggtagaaga
ggtaattctggcacaccaggttcccggggagatccaggtgaccaagggccattgggatct
atgggtgccaagggaccagtgggcactgctttaatggaaccttgtgaacttgtgaatttt
acacgaaaaaactgcccatgctcatcagacacatgcccagcttatccaactgaagtggtt
tttgccttggatatgtctgatgatgttacaccagctgcatttgaaagaatgaggaacatt
gttattttattgctgaagaccattaagatcagtgaaagcaattgcccaacaggcgctcgt
gtttctgttgtttctttcaatatcaacatacactatctcatccgattctctgaattccaa
aaaaacaacttgctgctacaagcagtccagagaatcccactagagagatccagtggaaaa
cgaaatattggagcagccatgagatttgttgcaagaaacgtcttcaaacgtgttcgtcag
ggcatcctcacaagaaaagttgccctgttttttgccaatggtccatcgcaggatgatgtt
gccatcagcacagctgtgcttgagttgagtgctctggatatcactccagtggttattgcc
ttcagtgaggtgccaaatgtcagacgtgccttctctattgatgacacaagaaaatttcaa
ttatttgtttgggaaagacaacaagatgaaagtttggaggacatcacatattgtacattg
tgctttgataaatgcaatccaagaaccaactgtgaggtgcctttttctcccctggttcag
atggatatggatataacttacgtcatggacagctctcgcagtgttagcagtgaacagttt
cagagagccaaagactttgtgagcaacatggtggatcagtttgtcgtttcctcacagcca
aatgaatcatatggaggcatcagagtggcattggtgcagcaggctcccaggggcttcctg
cctgacagaaaccagacacctgtggccttggagtttgacctagtcacatacagcaataaa
gatttgatgaagaaacacatccaagagtctgttcaccagctggaagggccatcagccatt
gcttctgctctacagtggacagttgaaaatgtattctttaaagcccccagacaaagaaaa
cacagagtcatatttacgatagacggaagcaaaacaagcacttgggacagagaaaggctg
agagagatttcactcggagccaagtgccaaggattcaccttattcactcttgcacttggc
agtgatgtgagtgacaatcagctgatggagctgtcaagctcccccacagatcagcactca
ctgacactgggcaggttttccacaccagagatggagtatgctcagaggtttagccgggca
ttcctaaatcttctacaacaagaaatgaacagttatccttcacctgaacttcaagaagag
tgtgaaaacttagatcggggagacatacaacaggaagcatccatgactgaaaggatacct
tttcctggaatggctgaaagtggttccagtcaagttttagaagacatggaaaaaaatgaa
agcagagttatgaagagtgtgaaagagaatgccaaagaacctgtatacacagtgccagaa
atgagagatgattatgaggagaatgagtatttcatagaggaaaatgctagaagggaaaag
cctcaagagtgtggaaaagctcaggagaagaacaagaaaaacttagagacaacagcagaa
actagaggtggctgtaacgattatgatgcatgtgaccttgttcaagatagtggagaatgt
cagaattacattttgaagtggtactacgacaaagagcagaaaatgtgtggtcagttctgg
tatgggggctgtggaggcaataaaaatagatttgaaacacaagaagaatgtggattcttg
tgtatagaatcctcctag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (9)   

Download RDF
DBGET integrated database retrieval system