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KEGG   Poecilia mexicana (shortfin molly): 106903438
Entry
106903438         CDS       T08022                                 
Name
(RefSeq) retinoic acid receptor RXR-beta-A-like isoform X1
  KO
K08524  retinoid X receptor alpha
Organism
pmei  Poecilia mexicana (shortfin molly)
Pathway
pmei03320  PPAR signaling pathway
pmei04148  Efferocytosis
pmei04920  Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:pmei00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    106903438
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pmei03000]
    106903438
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:pmei03310]
    106903438
Transcription factors [BR:pmei03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    106903438
Nuclear receptors [BR:pmei03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   106903438
SSDB
Motif
Pfam: Hormone_recep zf-C4 Nuc_recep-AF1
Other DBs
NCBI-GeneID: 106903438
NCBI-ProteinID: XP_014822716
Ensembl: ENSPMEG00000020993
UniProt: A0A3B3Z068
Position
Unknown
AA seq 444 aa
MSAPQPNSSASNSPTNFIGSPFSVISPSLSSPVVSPSLGFGPISSSQISSSAPISGMHSV
SSSEDIKPPFGLRPMQAHSPGIMMSQKRLCVICGDRSSGKHYGVYSCEGCKGFFKRTVRK
DLSYTCRDNKECLVDKRQRNRCQYCRYQKCLAMGMKREAVNPIKWKNKDGKDEGWMTVQE
ERQRNREREGELEFSSGVNDEMPVEKILEAEMAVDMRVDLHSDRGSAGNSPHDAVSNICQ
TADKQLFALVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIPLKDGALLASEL
QRDSAHMAGVGAIFDRESVQSAEVGAIFDRVLTELVNKMRDMQMDKTELGCLRAIVLFNP
DAKGLSSTSEVELLREKVYASLEAYCKHKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFF
FKLIGDTPIDTFLMEMLEAPHQLS
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgtccgcacctcaacctaacagctcagcctccaacagcccaaccaacttcattggttct
cctttttcagtgataagtccttctctcagctctccggtggtatctccctctctgggattt
ggacccatcagcagcagtcagatttcgtcgtcagcaccaatatcagggatgcattcagtc
agcagctcagaagatattaagcctccatttggcctgaggcccatgcaagctcacagcccg
ggaataatgatgtctcagaaacgactgtgtgtgatctgtggcgaccgctcttctggcaaa
cactacggcgtgtacagctgtgaggggtgcaaaggtttctttaaacgaactgtgcgcaaa
gacctgagctacacctgcagggataacaaggagtgcctggtggacaaacgccagcgcaac
cgctgccagtactgccgctaccagaagtgcctggccatgggtatgaagagagaagcggta
aatcctataaagtggaaaaacaaggatggaaaagatgagggatggatgacggttcaggag
gagcgtcagaggaacagagagcgcgagggagagctggagttcagctccggagtgaacgac
gagatgcctgtggagaagatcttggaggcggagatggccgtggatatgcgggtggacctt
cactccgatagagggtctgcaggaaactctccccatgatgccgtttccaacatctgccag
actgctgacaagcagctgtttgctttggtggagtgggcaaagagaatccctcatttctca
gagctgccccttgatgatcaggtcatcctcctgcgtgcagggtggaatgagctcctgata
gcctcgttctcccatcgctccatccctctgaaggatggcgctctgctggcgtccgagctg
cagcgtgacagcgcacacatggccggagttggtgctatttttgatagggagagtgtgcag
agtgcagaagttggtgccatatttgatagggttctcactgagctcgttaacaaaatgaga
gatatgcaaatggacaaaacagagctgggctgtctccgggctattgtcctgtttaaccca
gatgctaaagggctctccagcacaagtgaggtggagctccttagagaaaaagtctatgca
tcactggaagcttactgcaagcataagtatccagagcagcagggaaggtttgcgaagctc
ctccttcgacttccagcgctgagatccattggcctgaagtgcttggagcatctttttttc
ttcaaactgatcggggacacgcctatcgacaccttcctcatggaaatgcttgaagctccc
catcagttgtcttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (19)   

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